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  • 11
    Publication Date: 2023-11-24
    Description: The Middle Miocene (15.99–11.65 Ma) of Europe witnessed major climatic, environmental, and vegetational change, yet we are lacking detailed reconstructions of Middle Miocene temperature and precipitation patterns over Europe. Here, we use a high‐resolution (∼0.75°) isotope‐enabled general circulation model (ECHAM5‐wiso) with time‐specific boundary conditions to investigate changes in temperature, precipitation, and δ〈sup〉18〈/sup〉O in precipitation (δ〈sup〉18〈/sup〉O〈sub〉p〈/sub〉). Experiments were designed with variable elevation configurations of the European Alps and different atmospheric CO〈sub〉2〈/sub〉 levels to examine the influence of Alpine elevation and global climate forcing on regional climate and δ〈sup〉18〈/sup〉Op patterns. Modeling results are in agreement with available paleobotanical temperature data and with low‐resolution Middle Miocene experiments of the Miocene Model Intercomparison Project (MioMIP1). However, simulated precipitation rates are 300–500 mm/yr lower in the Middle Miocene than for pre‐industrial times for central Europe. This result is consistent with precipitation estimates from herpetological fossil assemblages, but contradicts precipitation estimates from paleobotanical data. We attribute the Middle Miocene precipitation change in Europe to shifts in large‐scale pressure patterns in the North Atlantic and over Europe and associated changes in wind direction and humidity. We suggest that global climate forcing contributed to a maximum δ〈sup〉18〈/sup〉O〈sub〉p〈/sub〉 change of ∼2‰ over high elevation (Alps) and ∼1‰ over low elevation regions. In contrast, we observe a maximum modeled δ〈sup〉18〈/sup〉O〈sub〉p〈/sub〉 decrease of 8‰ across the Alpine orogen due to Alpine topography. However, the elevation‐δ〈sup〉18〈/sup〉O〈sub〉p〈/sub〉 lapse rate shallows in the Middle Miocene, leading to a possible underestimation of paleotopography when using present‐day δ〈sup〉18〈/sup〉O〈sub〉p〈/sub〉—elevation relationships data for stable isotope paleoaltimetry studies.
    Description: Key Points: A high‐resolution isotope‐enabled general circulation model is used to explore Middle Miocene climate and precipitation δ〈sup〉18〈/sup〉O across Europe. Middle Miocene bi‐directional precipitation change consistent with herpetological fossils and account for precipitation δ〈sup〉18〈/sup〉O variations. Global Miocene climate forcing contributed a max δ〈sup〉18〈/sup〉O change of ∼2‰ over the high Alpine elevation and to ∼1‰ over low elevation.
    Description: German research fondation
    Description: Alexander‐von‐Humboldt foundation, Feodor‐Lynen‐Fellowship
    Description: Alexander‐von‐Humboldt foundation, Humboldt Research Fellowship
    Description: Scientific Steering Committee
    Description: https://mpimet.mpg.de/fileadmin/projekte/ICON-ESM/mpi-m_sla_201202.pdf
    Description: https://gitlab.awi.de/mwerner/mpi-esm-wiso
    Description: https://zenodo.org/record/6308475#.Y0gmDSFS-2w
    Keywords: ddc:550.724 ; Europe ; Middle Miocene ; climate modeling ; stable water isotopes ; temperature ; precipitation ; paleoclimate ; paleoelevation ; Alps
    Language: English
    Type: doc-type:article
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  • 12
    ISSN: 1524-4741
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Medicine
    Notes: Abstract: Various factors influence analysis of steroid receptors, including tissue processing, fixation, and antibody clones used. Furthermore, the detection methods, that is, use of epitope retrieval by microwave heating and signal amplification, may affect the reliability of the results. Eleven different fixation/tissue-processing methods as well as different commercial antibodies for the estrogen-and progesterone-receptors and the tyramine amplification technique were evaluated for optimizing the staining procedures.Moreover, the results from the optimal immunohistochemical procedure were compared with results obtained using a biochemical dextran-coated charcoal assay in 88 breast carcinomas from postmenopausal patients. The four antibody clones tested (1D5, 6F11, 1A6, and antiserum) revealed different sensibility to formalin, either favoring shorter or longer periods of fixation. Overall, a delay in the onset of fixation showed the worst results, whereas overfixation for up to 4 days or pH of formalin had little influence. Using the new tyramine technique it was possible to reduce costs per slide considerably by increasing antibody dilution.Comparison of the biochemical assay with optimized immunohistochemistry in the 88 cases investigated showed an overall concordance of 98.9%. Our study suggests an optimized immunohistochemical procedure that can replace the biochemical “gold standard” if standardization of tissue processing is maintained.
    Type of Medium: Electronic Resource
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  • 13
    ISSN: 1524-4741
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Medicine
    Notes: Abstract: The recently developed method of ultrarapid immunohistochemistry (IHC) was applied to the intraoperative examination of sentinel lymph nodes (SLNs) in breast cancer patients. In a prospective study of 50 patients with invasive breast carcinomas, a total of 60 SLNs were studied. Among them, 33 SLNs from 30 patients were studied intraoperatively using a direct immunoperoxidase method with anticytokeratin antibody clone MNF116. This technique has a turnaround time of less than 20 minutes Ultrarapid IHC revealed 15 positive SLNs compared to 14 positive SLNs using hematoxylin and eosin (H&E) frozen sections. The one SLN missed in H&E frozen sections presented with cytokeratin-positive isolated tumor cells in the lymph node sinus. After paraffin embedding, H&E-stained serial step sections of the SLN specimens detected another two patients with isolated tumor cells. We also examined the remaining axillary lymph nodes (ALNs) by H&E-stained serial step paraffin sections. From 17 of the 30 patients with positive SLNs, 6 patients also had metastatic involvement of the ALNs of level I or II. Thus ultrarapid IHC was a very sensitive and rapid technique for the intraoperative detection of metastatic involvement of SLNs in breast cancer patients. This technique may be a useful complementary tool for the intraoperative study of SLNs, particularly in tumors that are a diagnostic challenge, such as lobular carcinoma. 
    Type of Medium: Electronic Resource
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  • 14
    ISSN: 1432-2307
    Keywords: Key words Accreditation ; Diagnostic molecular pathology ; Quality assessment ; Technical standard
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract  In order to assess the current technical standard of diagnostic molecular pathology, we have conducted a multicenter trial with 34 participating pathology laboratories in Germany, Austria and Switzerland. Formalin-fixed, paraffin-embedded tissue blocks were selected from 15 cases, comprising 4 B-cell non-Hodgkin’s lymphomas, 4 T-cell non-Hodgkin lymphomas, 4 cases with lymphadenitis, 2 cases with confirmed tuberculosis and 1 case of sarcoidosis. All participating laboratories received one 10-µm section from each of the 15 cases to detect clonality using immunoglobulin heavy chain (IgH) gene or T-cell receptor (TCR)-γ gene rearrangement analysis in 12 and mycobacterial DNA in 3 cases. In addition, participants had to answer technical questions about the application of internal quality controls and performance of fragment length or sequence analysis. Correct results were reported in 80% and 90% for IgH and TCR-γ gene rearrangement analysis, respectively, and in 83% for mycobacterial DNA analysis. No significant differences in the quality of results were obvious when the individual techniques used for molecular analysis were compared. However, when two independent techniques were used by the same laboratory, a higher rate of correct results was obtained for IgH and TCR rearrangement analysis. In conclusion, this study demonstrates a high technical standard of molecular diagnostic adjuncts among the participating laboratories. Regular multicenter trials with a greater number of participating laboratories working in this field will be indispensable to ensure a continuing or increasing standard in diagnostic molecular pathology.
    Type of Medium: Electronic Resource
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  • 15
    ISSN: 1437-1596
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine , Law
    Type of Medium: Electronic Resource
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  • 16
    Electronic Resource
    Electronic Resource
    Springer
    International journal of legal medicine 29 (1938), S. 295-302 
    ISSN: 1437-1596
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine , Law
    Type of Medium: Electronic Resource
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  • 17
    ISSN: 1432-2307
    Keywords: Key words Comparative genomic hybridization ; Laser-assisted microdissection ; DOP-PCR ; Prostatic carcinoma ; Prostatic intraepithelial neoplasia
    Source: Springer Online Journal Archives 1860-2000
    Topics: Medicine
    Notes: Abstract  We combined laser-assisted microdissection from H&E-stained paraffin sections, degenerated oligonucleotide-primed polymerase chain reaction (DOP-PCR), and comparative genomic hybridization (CGH) to analyse chromosomal imbalances in small tumour areas consisting of 50–100 cells. This approach was used to investigate intratumour genetic heterogeneity in a case of metastatic prostatic adenocarcinoma and chromosomal changes in areas of prostatic intraepithelial neoplasia (PIN) adjacent to the invasive tumour. In four microdissected invasive tumour areas with different histological patterns (acinar, cribriform, papillary and solid) marked intratumour heterogeneity was found by CGH. Recurrent chromosomal imbalances detected in at least two microdissected tumour areas were gains on 1p32→p36, 2p22, 3q21, 7, 8q21→q24, 11q12→q13, 16p12→p13, 17, 19 and loss on 16q23. Additional chromosomal changes were found in only one of the microdissected areas (gains on 16q21→q23, 20q22 and losses on 8p21→p23, 12p11→q12, 12q21→q26, 13q21→q34, 16q12, and 18q22). In PIN, gains on chromosomes 8q21→q24 and 17 were found in both samples investigated (low and high grade PIN), while gains on chromosomes 7, 11q, 12q, 16p, and 20q and losses on 2p, 8p21→p23, 12q were found only in one PIN area. Controls to ensure reliable CGH results consisted in CGH analyses of (i) approximately 80 microdissected normal epithelial cells, which showed no aberrations after DOP-PCR and (ii) larger cell numbers (approximately 105 or 107 cells) of the primary tumour investigated without DOP-PCR and partially displaying the chromosomal imbalances (gain on 16p12→p13, losses on 2p25, 8p21→p23, 12p11→p12, 12q21→q26, 18q22) found in the small microdissected areas. Microsatellite and FISH analyses further confirmed our CGH results from microdissected cells. The combined approach of laser-assisted microdissection, DOP-PCR and CGH is suitable to identify early genetic changes in PIN and chromosomal imbalances associated with the particular histological patterns of invasive prostatic adenocarcinoma.
    Type of Medium: Electronic Resource
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  • 18
    Electronic Resource
    Electronic Resource
    Springer
    Histochemistry and cell biology 105 (1996), S. 253-260 
    ISSN: 1432-119X
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract In this overview we emphasize new methods of improving immunohistochemical results in formaldehyde-fixed tissue samples. The benefit of heat-induced antigen retrieval in demasking of concealed epitopes is demonstrated. We provide guidance on the influence of heat-induced antigen retrieval in commonly applied monoclonal and polyconal antibodies. Moreover, we show the promising methods of signal amplification using biotinylated tyramine and signal intensification of diaminobenzidine reaction products by metallic ions.
    Type of Medium: Electronic Resource
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  • 19
    ISSN: 1432-119X
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract  Interphase fluorescence in situ hybridization (FISH) was performed on 15-μm-thick paraffin sections from prostatic carcinomas using a chromosome 7-specific α-satellite DNA probe. A confocal laser scanning microscope (CLSM) was used for optical sectioning of the thick sections and reconstruction of 3D images. The number of FISH signals was determined by a gallery of optical sections evaluating only complete nuclei. To investiate the influence of section thickness and truncation and nuclei on scoring results, we compared the FISH data from 15-μm sections with signal counts obtained from 5-μm sections. The latter were evaluated by conventional fluorescence microscopy in the same tumor regions previously defined and marked on the slides. After statistical analysis of spot frequencies in tumor and non-tumorous cells (χ2 test), we transferred the signal frequencies into a cytogenetic classification (−7, +7, polysomy 7). Based on this classification, most cases showed more than one chromosome 7 aberration type. Trisomy 7 (+7) became apparent in 15-μm-thick sections in all 19 tumors, polysomy 7 (〉3 spots) in 18/19 cases, and monosomy 7 (−7) in 13/19 cases. In 5-μm sections, however, trisomy 7 and polysomy 7 were found in only 7/19 and 13/19 cases, respectively, and monosomy 7 in 7/19 cases. When comparing the classification results of tumor cells of the same tumor regions originating either from 5-μm or 15-μm sections, the following discrepancies were noted: in 15-μm sections exclusively, in 12/19 tumors, trisomy 7 was found; in 6/19 cases, polysomy 7; in 8/19 cases, monosomy 7. The high proportion of cases with tumor nuclei expressing only one hybridization signal of chromosome 7 in 15-μm sections could be confirmed as monosomy 7 in five selected cases by double-hybridization using centromere-specific probes for chromosomes 7 and 12. These results demonstrate that numerical chromosome 7 aberrations are more frequently observed in thick (15-μm) paraffin-embedded tissue sections by evaluating only complete nuclei. The use of routine sections (5-μm) for interphase cytogenetic analyses is compromised by a remarkable underestimation of the real chromosome copy numbers.
    Type of Medium: Electronic Resource
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  • 20
    ISSN: 1432-119X
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract Conventional karyotyping of Hodgkin's disease (HD) has until now yielded only limited insight into karyotypic characteristics of this discase. For this reason, fluorescence in situ hybridization (FISH) using alphasatellite chromosome-specific probes was applied to paraffin sections of HD tumors in order to verify numerical aberrations suggested to be specific for HD in the literature. The FISH technique was combined with immunohistochemical detection of the CD30 antigen to allow easier identification of the Reed-Sternberg and Hodgkin (RS&H) cells. The number of specific FISH signals per nucleus was determined both in CD30-positive RS&H cells as well as in non-malignant “bystander” cells in order to assess differences in the signal distribution. Contrasted with normal lymphoid cells, the tumor cells in HD were found to be polysomic for at least one of the chromosomes analyzed (1,2,4, and 8). The technique described is a reliable method for confirmation of results obtained from conventional cytogenetics, which is especially suited for archival material or samples not containing dividing cells.
    Type of Medium: Electronic Resource
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