Description: The aim of the present work was to unravel which environmental drivers govern the dynamics of toxic dinoflagellate abundance as well as their associated paralytic shellfish toxins (PSTs), diarrhetic shellfish toxins (DSTs) and pectenotoxin-2 (PTX2) in Ambon Bay, Eastern Indonesia. Weather, biological and physicochemical parameters were investigated weekly over a 7-month period. Both PSTs and PTX2 were detected at low levels, yet they persisted throughout the research. Meanwhile, DSTs were absent. A strong correlation was found between total particulate PST and Gymnodinium catenatum cell abundance, implying that this species was the main producer of this toxin. PTX2 was positively correlated with Dinophysis miles cell abundance. Vertical mixing, tidal elevation and irradiance attenuation were the main environmental factors that regulated both toxins and cell abundances, while nutrients showed only weak correlations. The present study indicates that dinoflagellate toxins form a potential environmental, economic and health risk in this Eastern Indonesian bay.

Description: Here we present a new, pan-Atlantic compilation and analysis of data on Calanus finmarchicus abundance, demography, dormancy, egg production and mortality in relation to basin-scale patterns of temperature, phytoplankton biomass, circulation and other environmental characteristics in the context of understanding factors determining the distribution and abundance of C. finmarchicus across its North Atlantic habitat. A number of themes emerge: (1) the south-to-north transport of plankton in the northeast Atlantic contrasts with north-to-south transport in the western North Atlantic, which has implications for understanding population responses of C. finmarchicus to climate forcing, (2) recruitment to the youngest copepodite stages occurs during or just after the phytoplankton bloom in the east whereas it occurs after the bloom at many western sites, with up to 3.5 months difference in recruitment timing, (3) the deep basin and gyre of the southern Norwegian Sea is the centre of production and overwintering of C. finmarchicus, upon which the surrounding waters depend, whereas, in the Labrador/Irminger Seas production mainly occurs along the margins, such that the deep basins serve as collection areas and refugia for the overwintering populations, rather than as centres of production, (4) the western North Atlantic marginal seas have an important role in sustaining high C. finmarchicus abundance on the nearby coastal shelves, (5) differences in mean temperature and chlorophyll concentration between the western and eastern North Atlantic are reflected in regional differences in female body size and egg production, (6) regional differences in functional responses of egg production rate may reflect genetic differences between western and eastern populations, (7) dormancy duration is generally shorter in the deep waters adjacent to the lower latitude western North Atlantic shelves than in the east, (8) there are differences in stage-specific daily mortality rates between eastern and western shelves and basins, but the survival trajectories for cohort development from CI to CV are similar, and (9) early life stage survival is much lower in regions where C. finmarchicus is found with its congeners, C. glacialis and/or C. hyperboreus. This compilation and analysis provides new knowledge for evaluation and parameterisation of population models of C. finmarchicus and their responses to climate change in the North Atlantic. The strengths and weaknesses of modeling approaches, including a statistical approach based on ecological niche theory and a dynamical approach based on knowledge of spatial population dynamics and life history, are discussed, as well as needs for further research.

Description: The snow crab Chionoecetes opilio and Arctic lyre crab Hyas coarctatus are prominent members of the Chukchi Sea epifaunal community. A better understanding of their life history will aid in determining their role in this ecosystem in light of the changing climate and resource development. In this study, the size frequency distribution, growth, and mortality of these two crab species was examined in 2009, 2010, 2012, and 2013 to determine temporal and spatial patterns within the eastern Chukchi Sea, and to identify potential environmental drivers of the observed patterns. Temporally, the mean size of both sexes of C. opilio and H. coarctatus decreased significantly from 2009 to 2013, with the number of rare maximum sized organisms decreasing significantly to near absence in the latter two study years. Spatially, the mean size of male and female crabs of both species showed a latitudinal trend, decreasing from south to north in the investigation area. Growth of both sexes of C. opilio and H. coarctatus was linear over the sampled size range, and mortality was highest in the latter two study years. Life history features of both species related to different environmental parameters in different years, ranging from temperature, the sediment carbon to nitrogen ratio of the organic content, and sediment grain size distribution. Likely explanations for the observed temporal and spatial variability are ontogenetic migrations of mature crabs to warmer areas possibly due to cooler water temperatures in the latter two study years, or interannual fluctuations, which have been reported for C. opilio populations in other areas where successful waves of recruitment were estimated to occur in eight year intervals. Further research is suggested to determine if the spatial and temporal patterns found in this study are part of the natural variability in this system or if they are an indication of long-term trends.

Description: Against the background of a drastically increased demand of marine proteins, off-bottom, bivalve aquaculture, provides significant potential for production growth when moved into more energetic marine waters. Hence, research, industry and politics are currently proposing the development of new offshore sites. The highly energetic conditions at these sites present a challenging environment for bivalve aquaculture. In this work, physical experiments of suspended bivalves provide new knowledge on the commonly used design parameters: the drag and inertia coefficients. Live bivalves and manufactured surrogate models at a 1:1 scale were tested in a towing tank as well as under waves. The drag coefficient of live blue mussels was determined to be Cd = 1.6 for Reynolds numbers between 2.3 × 104 and 1.4 × 105. The inertia coefficient obtained from the wave tests was Cm = 2.1 for Keulegan Carpenter numbers KC 〈 10. In a pursuit to better understand the differences between live mussels and surrogates in laboratory conditions, the analysis revealed that appropriate surrogates can be identified. A method to determine the characteristic diameter of mussel dropper lines is suggested. The results facilitate the future design of aquaculture systems in high-energy environments and allow for an integration into numerical models.

Description: The manganese nodule belt within the Clarion and Clipperton Fracture Zones (CCZ) in the abyssal NE Pacific Ocean is characterized by numerous seamounts, low organic matter (OM) depositional fluxes and meter-scale oxygen penetration depths (OPD) into the sediment. The region hosts contract areas for the exploration of polymetallic nodules and Areas of Particular Environmental Interest (APEI) as protected areas. In order to assess the impact of potential mining on these deep-sea sediments and ecosystems, a thorough determination of the natural spatial variability of depositional and geochemical conditions as well as biogeochemical processes and element fluxes in the different exploration areas is required. Here, we present a comparative study on (1) sedimentation rates and bioturbation depths, (2) redox zonation of the sediments and element fluxes as well as (3) rates and pathways of biogeochemical reactions at six sites in the eastern CCZ. The sites are located in four European contract areas and in the APEI3. Our results demonstrate that the natural spatial variability of depositional and (bio)geochemical conditions in this deep-sea sedimentary environment is much larger than previously thought. We found that the OPD varies between 1 and 4.5 m, while the sediments at two sites are oxic throughout the sampled interval (7.5 m depth). Below the OPD, manganese and nitrate reduction occur concurrently in the suboxic zone with pore-water Mn2+ concentrations of up to 25 µM. The thickness of the suboxic zone extends over depth intervals of less than 3 m to more than 8 m. Our data and the applied transport-reaction model suggest that the extension of the oxic and suboxic zones is ultimately determined by the (1) low flux of particulate organic carbon (POC) of 1–2 mg Corg m−2 d−1 to the seafloor, (2) low sedimentation rates between 0.2 and 1.15 cm kyr−1 and (3) oxidation of pore-water Mn2+ at depth. The diagenetic model reveals that aerobic respiration is the main biogeochemical process driving OM degradation. Due to very low POC fluxes of 1 mg m−2 d−1 to the seafloor at the site investigated in the protected APEI3 area, respiration rates are twofold lower than at the other study sites. Thus, the APEI3 site does not represent the (bio)geochemical conditions that prevail in the other investigated sites located in the European contract areas. Lateral variations in surface water productivity are generally reflected in the POC fluxes to the seafloor across the various areas but deviate from this trend at two of the study sites. We suggest that the observed spatial variations in depositional and (bio)geochemical conditions result from differences in the degree of degradation of OM in the water column and heterogeneous sedimentation patterns caused by the interaction of bottom water currents with seafloor topography.

Description: Lake eutrophication is a pervasive problem globally, particularly serious in agricultural and densely pop- ulated areas. Whenever nutrients nitrogen and phosphorus do not limit phytoplankton growth directly, high growth rates will rapidly lead to biomass increases causing self-shading and light-limitation, and eventually CO2 depletion. The paradigm of phytoplankton limitation by nutrients and light is so perva- sively established, that the lack of nutrient limitation is ordinarily interpreted as sufficient evidence for the condition of light limitation, without considering the possibility of limitation by inorganic carbon. Here, we firstly evaluated how frequently CO2 undersaturation occurs in a set of eutrophic lakes in the Pampa plains. Our results confirm that conditions of CO2 undersaturation develop much more frequently (yearly 34%, summer 44%) in these agriculturally impacted lakes than in deep, temperate lakes in forested watersheds. Secondly, we used Generalized Additive Models to fit trends in CO2 concentration considering three drivers: total incident irradiance, chlorophyll a concentration, and lake depth; in eight multi-year datasets from eutrophic lakes from Europe, North and South America, Asia and New Zealand. CO2 deple- tion was more often observed at high irradiance levels, and shallow water. CO2 depletion also occurred at high chlorophyll concentration. Finally, we identified occurrences of light- and carbon-limitation at the whole-lake scale. The different responses of chlorophyll a and CO2 allowed us to develop criteria for detecting conditions of CO2 limitation. For the first time, we pro- vided whole-lake evidence of carbon limitation of phytoplankton biomass. CO2 increases and eutrophi- cation represent two major and converging environmental problems that have additive and contrasting effects, promoting phytoplankton, and also leading to carbon depletion. Their interactions deserve further exploration and imaginative approaches to deal with their effects.

Description: The initial, anthropocentric view of the deep ocean was that of a hostile environment inhabited by organisms rendered lethargic by constant high pressure, low temperature and sparse food supply, hence evolving slowly. This conceptual framework of a spatially and temporally homogeneous, connected, strongly bottom-up controlled habitat implied a strong constraint on, or poor incentive for, speciation. Hence, the discovery in the late 1960s of high species diversity of abyssal benthic invertebrates came as a surprise. Since then, the slow-motion view of deep-sea ecology and evolution has speeded up and diversified in the light of increasing evidence accumulating from in situ visual observations complemented by molecular and other tools. The emerging picture is that of a much livelier, highly diversified and more complex deep-sea fauna than previously assumed. In this review we examine the consequences of the incoming information for developing a broader view of evolutionary ecology in the deep sea, and for scavenging amphipods in particular. We revisit the food supply to the deep-sea floor and hypothesize that the dead bodies of animals, ranging from zooplankton to large fish are likely to be a more important source of food than their friable faeces. Camera observations of baited traps indicate that amphipod carrion-feeders arrive within hours at the bait which continues to draw new individuals for days to months later, presumably by scent trails in tidal currents. We explore the different stages of food acquisition upon which natural selection may have acted, from detection to ingestion, and discuss the possibility of a broader range of food acquisition strategies, including predation and specializations. Although currently neglected in deep-sea ecology, top-down factors are likely to play a more important role in the evolution of deep-sea organisms. Predation on amphipods at baits by bathyal and abyssal fishes, and large predatory crustaceans in the hadal zone, is often observed. Finally, we develop hypotheses regarding the effects of past, present and imminent anthropogenic activities on scavenger biomass and how these can be tested with the most modern tools.

Description: The west Antarctic Peninsula (WAP) region has undergone significant changes in temperature and seasonal ice dynamics since the mid-twentieth century, with strong impacts on the regional ecosystem, ocean chemistry and hydrographic properties. Changes to these long-term trends of warming and sea ice decline have been observed in the 21st century, but their consequences for ocean physics, chemistry and the ecology of the high-productivity shelf ecosystem are yet to be fully established. The WAP shelf is important for regional krill stocks and higher trophic levels, whilst the degree of variability and change in the physical environment and documented biological and biogeochemical responses make this a model system for how climate and sea ice changes might restructure high-latitude ecosystems. Although this region is arguably the best-measured and best-understood shelf region around Antarctica, significant gaps remain in spatial and temporal data capable of resolving the atmosphere-ice-ocean-ecosystem feedbacks that control the dynamics and evolution of this complex polar system. Here we summarise the current state of knowledge regarding the key mechanisms and interactions regulating the physical, biogeochemical and biological processes at work, the ways in which the shelf environment is changing, and the ecosystem response to the changes underway. We outline the overarching cross-disciplinary priorities for future research, as well as the most important discipline-specific objectives. Underpinning these priorities and objectives is the need to better-define the causes, magnitude and timescales of variability and change at all levels of the system. A combination of traditional and innovative approaches will be critical to addressing these priorities and developing a co-ordinated observing system for the WAP shelf, which is required to detect and elucidate change into the future.

Description: The dumping of dredged sediments represents a major stressor for coastal ecosystems. The impact on the ecosystem function is determined by its complexity not easy to assess. In the present study, we evaluated the potential of bacterial community analyses to act as ecological indicators in environmental monitoring programmes. We investigated the functional structure of bacterial communities, applying functional gene arrays (GeoChip 4.2). The relationship between functional genes and environmental factors was analysed using distance-based multivariate multiple regression. Apparently, both the function and structure of the bacterial communities are impacted by dumping activities. The bacterial community at the dumping centre displayed a significant reduction of its entire functional diversity compared with that found at a reference site. DDX compounds separated bacterial communities of the dumping site from those of un-impacted sites. Thus, bacterial community analyses show great potential as ecological indicators in environmental monitoring.