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  • 1
    Publication Date: 2021-07-21
    Description: Large benthic foraminifera are major carbonate components in tropical carbonate platforms, important carbonate producers, stratigraphic tools and powerful bioindicators (proxies) of environmental change. The application of large benthic foraminifera in tropical coral reef environments has gained considerable momentum in recent years. These modern ecological assessments are often carried out by micropalaeontologists or ecologists with expertise in the identification of foraminifera. However, large benthic foraminifera have been under‐represented in favour of macro reef‐builders, for example, corals and calcareous algae. Large benthic foraminifera contribute about 5% to modern reef‐scale carbonate sediment production. Their substantial size and abundance are reflected by their symbiotic association with the living algae inside their tests. When the foraminiferal holobiont (the combination between the large benthic foraminifera host and the microalgal photosymbiont) dies, the remaining calcareous test renourishes sediment supply, which maintains and stabilizes shorelines and low‐lying islands. Geological records reveal episodes (i.e. late Palaeocene and early Eocene epochs) of prolific carbonate production in warmer oceans than today, and in the absence of corals. This begs for deeper consideration of how large benthic foraminifera will respond under future climatic scenarios of higher atmospheric carbon dioxide (pCO2) and to warmer oceans. In addition, studies highlighting the complex evolutionary associations between large benthic foraminifera hosts and their algal photosymbionts, as well as to associated habitats, suggest the potential for increased tolerance to a wide range of conditions. However, the full range of environments where large benthic foraminifera currently dwell is not well‐understood in terms of present and future carbonate production, and impact of stressors. The evidence for acclimatization, at least by a few species of well‐studied large benthic foraminifera, under intensifying climate change and within degrading reef ecosystems, is a prelude to future host–symbiont resilience under different climatic regimes and habitats than today. This review also highlights knowledge gaps in current understanding of large benthic foraminifera as prolific calcium carbonate producers across shallow carbonate shelf and slope environments under changing ocean conditions.
    Description: Minerva Foundation http://dx.doi.org/10.13039/501100001658
    Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659
    Keywords: 561 ; Bioindicators ; carbonate engineers ; climate change ; environmental stressors ; ocean acidification ; photosymbionts ; sea‐level rise ; water quality
    Type: article
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  • 2
    Publication Date: 2022-03-31
    Description: Early‐diagenetic cementation of tropical carbonates results from the combination of numerous physico‐chemical and biological processes. In the marine phreatic environment it represents an essential mechanism for the development and stabilization of carbonate platforms. However, diagenetic cements that developed early in the marine phreatic environment are likely to become obliterated during later stages of meteoric or burial diagenesis. When lithified sediment samples are studied, this complicates the recognition of processes involved in early cementation, and their geological implications. In this contribution, a petrographic microfacies analysis of Holocene Halimeda segments collected on a coral island in the Spermonde Archipelago, Indonesia, is presented. Through electron microscopical analyses of polished samples, this study shows that segments are characterized by intragranular cementation of fibrous aragonite, equant High‐Mg calcite (3.9 to 7.2 Mol% Mg), bladed Low‐Mg calcite (0.4 to 1.0 Mol% Mg) and mini‐micritic Low‐Mg calcite (3.2 to 3.3 Mol% Mg). The co‐existence and consecutive development of fibrous aragonite and equant High‐Mg calcite results initially from the flow of oversaturated seawater along the aragonite template of the Halimeda skeleton, followed by an adjustment of cement mineralogy towards High‐Mg calcite as a result of reduced permeability and fluid flow rates in the pores. Growth of bladed Low‐Mg calcite cements on top of etched substrates of equant High‐Mg calcite is explained by shifts in pore water pH and alkalinity through microbial sulphate reduction. Microbial activity appears to be the main trigger for the precipitation of mini‐micritic Low‐Mg calcite as well, based on the presumable detection of an extracellular polymeric matrix during an early stage of mini‐micrite Low‐Mg calcite cement precipitation. Radiocarbon analyses of five Halimeda segments furthermore indicate that virtually complete intragranular cementation in the marine phreatic environment with thermodynamically/kinetically controlled aragonite and High‐Mg calcite takes place in about 100 years. Collectively, this study shows that early‐diagenetic cements are highly diverse and provides new quantitative constraints on the rate of diagenetic cementation in tropical carbonate factories.
    Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659
    Description: https://doi.pangaea.de/10.1594/PANGAEA.923980
    Keywords: ddc:552.5
    Language: English
    Type: doc-type:article
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  • 3
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    PANGAEA
    In:  Supplement to: Stuhr, Marleen; Reymond, Claire E; Rieder, Vera; Hallock, Pamela; Rahnenführer, Jörg; Westphal, Hildegard; Kucera, Michal (2017): Reef calcifiers are adapted to episodic heat stress but vulnerable to sustained warming. PLoS ONE, 12(7), e0179753, https://doi.org/10.1371/journal.pone.0179753
    Publication Date: 2023-01-13
    Description: Shallow marine ecosystems naturally experience fluctuating physicochemical conditions across spatial and temporal scales. Widespread coral-bleaching events, induced by prolonged heat stress, highlight the importance of how the duration and frequency of thermal stress influence the adaptive physiology of photosymbiotic calcifiers. Large benthic foraminifera harboring algal endosymbionts are major tropical carbonate producers and bioindicators of ecosystem health. Like corals, they are sensitive to thermal stress and bleach at temperatures temporarily occurring in their natural habitat and projected to happen more frequently. However, their thermal tolerance has been studied so far only by chronic exposure, so how they respond under more realistic episodic heat-event scenarios remains unknown. Here, we determined the physiological responses of Amphistegina gibbosa, an abundant western Atlantic foraminifera, to four different treatments--control, single, episodic, and chronic exposure to the same thermal stress (32°C)--in controlled laboratory cultures. Exposure to chronic thermal stress reduced motility and growth, while antioxidant capacity was elevated, and photosymbiont variables (coloration, oxygen-production rates, chlorophyll a concentration) indicated extensive bleaching. In contrast, single- and episodic-stress treatments were associated with higher motility and growth, while photosymbiont variables remained stable. The effects of single and episodic heat events were similar, except for the presumable occurrence of reproduction, which seemed to be suppressed by both episodic and chronic stress. The otherwise different responses between treatments with thermal fluctuations and chronic stress indicate adaptation to thermal peaks, but not to chronic exposure expected to ensue when baseline temperatures are elevated by climate change. This firstly implies that marine habitats with a history of fluctuating thermal stress potentially support resilient physiological mechanisms among photosymbiotic organisms. Secondly, there seem to be temporal constraints related to heat events among coral reef environments and reinforces the importance of temporal fluctuations in stress exposure in global-change studies and projections.
    Keywords: Leibniz Centre for Tropical Marine Research; ZMT
    Type: Dataset
    Format: application/zip, 10 datasets
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  • 4
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    PANGAEA
    In:  Supplement to: Stuhr, Marleen; Blank-Landeshammer, Bernhard; Reymond, Claire E; Kollipara, Laxmikanth; Sickmann, Albert; Kucera, Michal; Westphal, Hildegard (2018): Disentangling thermal stress responses in a reef-calcifier and its photosymbionts by shotgun proteomics. Scientific Reports, 8(1), https://doi.org/10.1038/s41598-018-21875-z
    Publication Date: 2023-01-14
    Description: The proliferation of key marine ecological engineers and carbonate producers often relies on their association with photosymbiotic algae. Evaluating stress responses of these organisms is important to predict their fate under future climate projections. Physiological approaches are limited in their ability to resolve the involved molecular mechanisms and attribute stress effects to the host or symbiont, while probing and partitioning of proteins cannot be applied in organisms where the host and symbiont are small and cannot be physically separated. Here we apply a label-free quantitative proteomics approach to detect changes of proteome composition in the diatom-bearing benthic foraminifera Amphistegina gibbosa experimentally exposed to three thermal-stress scenarios. We developed a workflow for protein extraction from less than ten specimens and simultaneously analysed host and symbiont proteomes. Despite little genomic data for the host, 1,618 proteins could be partially assembled and assigned. The proteomes revealed identical pattern of stress response among stress scenarios as that indicated by physiological measurements, but allowed identification of compartment-specific stress reactions. In the symbiont, stress-response and proteolysis-related proteins were up regulated while photosynthesis-related proteins declined. In contrast, host homeostasis was maintained through chaperone up-regulation associated with elevated proteosynthesis and proteolysis, and the host metabolism shifted to heterotrophy.
    Keywords: Leibniz Centre for Tropical Marine Research; ZMT
    Type: Dataset
    Format: application/zip, 1.2 MBytes
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  • 5
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    PANGAEA
    In:  Supplement to: Stuhr, Marleen; Meyer, Achim; Reymond, Claire E; Narayan, Gita R; Rieder, Vera; Rahnenführer, Jörg; Kucera, Michal; Westphal, Hildegard; Muhando, Christopher A; Hallock, Pamela (2018): Variable thermal stress tolerance of the reef-associated symbiont-bearing foraminifera Amphistegina linked to differences in symbiont type. Coral Reefs, 37(3), 811-824, https://doi.org/10.1007/s00338-018-1707-9
    Publication Date: 2023-01-13
    Description: We compared the responses of large benthic foraminifera to thermal stress in specimens from a population of Amphistegina lessonii, an abundant Indo-Pacific species, to specimens of A. gibbosa, its Atlantic counterpart, from a similar environment but two different water depths (5 m and 18 m). The test groups were exposed in a common experiment to three thermal-stress scenarios over a four-week period: (a) no thermal stress, i.e., control conditions at constant 25.5°C; (b) a single thermal stress event up to 32°C for three days, followed by control conditions; (c) episodic thermal stress events alternating with periods of six days at control conditions, and (d) chronic thermal stress at 32°C. Growth, respiration, mortality, and motility were measured to characterize the holobiont response. Coloration, photosynthesis, and chlorophyll a content were measured to determine the response of the endosymbiotic diatoms.
    Keywords: Leibniz Centre for Tropical Marine Research; ZMT
    Type: Dataset
    Format: application/vnd.openxmlformats-officedocument.spreadsheetml.sheet, 76.5 kBytes
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  • 6
    Publication Date: 2023-01-13
    Keywords: Bleaching frequency, proportion; Calculated; Leibniz Centre for Tropical Marine Research; Treatment; ZMT
    Type: Dataset
    Format: text/tab-separated-values, 59 data points
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  • 7
    Publication Date: 2023-01-13
    Keywords: Chlorophyll a per unit dry mass; Leibniz Centre for Tropical Marine Research; Treatment; ZMT
    Type: Dataset
    Format: text/tab-separated-values, 63 data points
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  • 8
    Publication Date: 2023-01-13
    Keywords: Leibniz Centre for Tropical Marine Research; Respiration rate, oxygen; Treatment; ZMT
    Type: Dataset
    Format: text/tab-separated-values, 59 data points
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  • 9
    Publication Date: 2023-01-13
    Keywords: Leibniz Centre for Tropical Marine Research; Motility index; Treatment; ZMT
    Type: Dataset
    Format: text/tab-separated-values, 65 data points
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  • 10
    Publication Date: 2023-01-13
    Keywords: Color, a*; Color, b*; Color, L*, lightness; Leibniz Centre for Tropical Marine Research; Treatment; ZMT
    Type: Dataset
    Format: text/tab-separated-values, 189 data points
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