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  • 1
    Electronic Resource
    Electronic Resource
    Anaerobic ammonium oxidation by anammox bacteria in the Black Sea (2003)
    [s.l.] : Macmillian Magazines Ltd.
    Nature 422 (2003), S. 608-611 
    Details
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] The availability of fixed inorganic nitrogen (nitrate, nitrite and ammonium) limits primary productivity in many oceanic regions. The conversion of nitrate to N2 by heterotrophic bacteria (denitrification) is believed to be the only important sink for fixed inorganic nitrogen in the ...
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1038/nature01472
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    Paper (German National Licenses)
    Fulltext
  • 2
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    EUREC4A Campaign, Cruise No. MSM89, 17. January - 20. February 2020, Bridgetown (Barbados) - Bridgetown (Barbados), The ocean mesoscale component in the EUREC4A++ field study (2020)
    Gutachterpanel Forschungsschiffe
    Details
    Publication Date: 2022-06-28
    Description: The MSM89 expedition of Maria S Merian was a contribution to the international research initiative EUREC4A (www.eurec4a.eu). The cruise was carried out in concert with the M161 campaign on RV METEOR (Germany) and the EUREC4A-OA campaign on NO L’ATALANTE (France). Airplane and drone operations as well as well as continuous observations from the ground-based site on the Island of Barbados (BCO) were considered during the MSM89 campaign. Moreover, the cruise was coordinated with ships and Saildrone© operations in the context of the US American ATOMIC project. The overall goal of the EUREC4A field campaign was to collect observational data that will enable research on dynamic and thermodynamic processes in the atmosphere and ocean that will bring the understanding of the role of clouds in the climate system to a new level. MSM89 had its focus on the ocean/atmosphere coupling across ocean mesoscale vortices. For this purpose, both ocean and atmosphere profile measurements were carried out to observe the temporal evolution and spatial heterogeneity of the atmospheric and oceanic boundary layer. Autonomous observing platforms (underwater glider) and a ship towed platform (Cloudkite) augmented the ship-based observations. Incubation experiments were performed to determine Nitrogen fixation rates, the gas exchange for carbon dioxide and oxygen uptake.
    Type: Report , NonPeerReviewed
    Format: text
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    OceanRep: Report - Cruise Report
  • 3
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    H2S events in the Peruvian oxygen minimum zone facilitate enhanced dissolved Fe concentrations (2018)
    Nature Research
    In:  Scientific Reports, 8 . Art.Nr. 12642.
    Details
    Publication Date: 2021-04-23
    Description: Dissolved iron (DFe) concentrations in oxygen minimum zones (OMZs) of Eastern Boundary Upwelling Systems are enhanced as a result of high supply rates from anoxic sediments. However, pronounced variations in DFe concentrations in anoxic coastal waters of the Peruvian OMZ indicate that there are factors in addition to dissolved oxygen concentrations (O2) that control Fe cycling. Our study demonstrates that sediment-derived reduced Fe (Fe(II)) forms the main DFe fraction in the anoxic/euxinic water column off Peru, which is responsible for DFe accumulations of up to 200 nmol L-1. Lowest DFe values were observed in anoxic shelf waters in the presence of nitrate and nitrite. This reflects oxidation of sediment-sourced Fe(II) associated with nitrate/nitrite reduction and subsequent removal as particulate Fe(III) oxyhydroxides. Unexpectedly, the highest DFe levels were observed in waters with elevated concentrations of hydrogen sulfide (up to 4 µmol L-1) and correspondingly depleted nitrate/nitrite concentrations (〈0.18 µmol L-1). Under these conditions, Fe removal was reduced through stabilization of Fe(II) as aqueous iron sulfide (FeSaqu) which comprises complexes (e.g., FeSH+) and clusters (e.g., Fe2S2|4H2O). Sulfidic events on the Peruvian shelf consequently enhance Fe availability, and may increase in frequency in future due to projected expansion and intensification of OMZs.
    Type: Article , PeerReviewed
    Format: text
    Format: text
    DOI: 10.1038/s41598-018-30580-w
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    OceanRep: Article in a Scientific Journal - peer-reviewed
  • 4
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    Oxygen minimum zone cryptic sulfur cycling sustained by offshore transport of key sulfur oxidizing bacteria (2018)
    Nature Research
    In:  Nature Communications, 9 (1729).
    Details
    Publication Date: 2021-02-08
    Description: Members of the gammaproteobacterial clade SUP05 couple water column sulfide oxidation to nitrate reduction in sulfidic oxygen minimum zones (OMZs). Their abundance in offshore OMZ waters devoid of detectable sulfide has led to the suggestion that local sulfate reduction fuels SUP05-mediated sulfide oxidation in a so-called “cryptic sulfur cycle”. We examined the distribution and metabolic capacity of SUP05 in Peru Upwelling waters, using a combination of oceanographic, molecular, biogeochemical and single-cell techniques. A single SUP05 species, UThioglobus perditus, was found to be abundant and active in both sulfidic shelf and sulfide-free offshore OMZ waters. Our combined data indicated that mesoscale eddy-driven transport led to the dispersal of UT. perditus and elemental sulfur from the sulfidic shelf waters into the offshore OMZ region. This offshore transport of shelf waters provides an alternative explanation for the abundance and activity of sulfide-oxidizing denitrifying bacteria in sulfide-poor offshore OMZ waters.
    Type: Article , PeerReviewed
    Format: text
    Format: text
    DOI: 10.1038/s41467-018-04041-x
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    OceanRep: Article in a Scientific Journal - peer-reviewed
  • 5
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    Aquatic Respiration Rate Measurements at Low Oxygen Concentrations (2014)
    Public Library of Science
    In:  PLoS ONE, 9 (2). e89369.
    Details
    Publication Date: 2014-08-11
    Description: Despite its huge ecological importance, microbial oxygen respiration in pelagic waters is little studied, primarily due to methodological difficulties. Respiration measurements are challenging because of the required high resolution of oxygen concentration measurements. Recent improvements in oxygen sensing techniques bear great potential to overcome these limitations. Here we compare 3 different methods to measure oxygen consumption rates at low oxygen concentrations, utilizing amperometric Clark type sensors (STOX), optical sensors (optodes), and mass spectrometry in combination with 18-18O2 labeling. Oxygen concentrations and consumption rates agreed well between the different methods when applied in the same experimental setting. Oxygen consumption rates between 30 and 400 nmol L−1 h−1 were measured with high precision and relative standard errors of less than 3%. Rate detection limits in the range of 1 nmol L−1 h−1 were suitable for rate determinations in open ocean water and were lowest at the lowest applied O2 concentration.
    Type: Article , PeerReviewed
    Format: text
    Format: text
    DOI: 10.1371/journal.pone.0089369
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    OceanRep: Article in a Scientific Journal - peer-reviewed
  • 6
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    Nitrogen cycling driven by organic matter export in the South Pacific oxygen minimum zone (2013)
    Nature Publishing Group
    In:  Nature Geoscience, 6 (3). pp. 228-234.
    Details
    Publication Date: 2019-09-23
    Description: Oxygen minimum zones are expanding globally, and at present account for around 20–40% of oceanic nitrogen loss. Heterotrophic denitrification and anammox—anaerobic ammonium oxidation with nitrite—are responsible for most nitrogen loss in these low-oxygen waters. Anammox is particularly significant in the eastern tropical South Pacific, one of the largest oxygen minimum zones globally. However, the factors that regulate anammox-driven nitrogen loss have remained unclear. Here, we present a comprehensive nitrogen budget for the eastern tropical South Pacific oxygen minimum zone, using measurements of nutrient concentrations, experimentally determined rates of nitrogen transformation and a numerical model of export production. Anammox was the dominant mode of nitrogen loss at the time of sampling. Rates of anammox, and related nitrogen transformations, were greatest in the productive shelf waters, and tailed off with distance from the coast. Within the shelf region, anammox activity peaked in both upper and bottom waters. Overall, rates of nitrogen transformation, including anammox, were strongly correlated with the export of organic matter. We suggest that the sinking of organic matter, and thus the release of ammonium into the water column, together with benthic ammonium release, fuel nitrogen loss from oxygen minimum zones.
    Type: Article , PeerReviewed
    Format: text
    DOI: 10.1038/ngeo1739
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    OceanRep: Article in a Scientific Journal - peer-reviewed
  • 7
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    Facets of diazotrophy in the oxygen minimum zone waters off Peru (2014)
    Nature Publishing Group
    In:  The ISME Journal, 8 (11). pp. 2180-2192.
    Details
    Publication Date: 2017-03-09
    Description: Nitrogen fixation, the biological reduction of dinitrogen gas (N2) to ammonium (NH4+), is quantitatively the most important external source of new nitrogen (N) to the open ocean. Classically, the ecological niche of oceanic N2 fixers (diazotrophs) is ascribed to tropical oligotrophic surface waters, often depleted in fixed N, with a diazotrophic community dominated by cyanobacteria. Although this applies for large areas of the ocean, biogeochemical models and phylogenetic studies suggest that the oceanic diazotrophic niche may be much broader than previously considered, resulting in major implications for the global N-budget. Here, we report on the composition, distribution and abundance of nifH, the functional gene marker for N2 fixation. Our results show the presence of eight clades of diazotrophs in the oxygen minimum zone (OMZ) off Peru. Although proteobacterial clades dominated overall, two clusters affiliated to spirochaeta and archaea were identified. N2 fixation was detected within OMZ waters and was stimulated by the addition of organic carbon sources supporting the view that non-phototrophic diazotrophs were actively fixing dinitrogen. The observed co-occurrence of key functional genes for N2 fixation, nitrification, anammox and denitrification suggests that a close spatial coupling of N-input and N-loss processes exists in the OMZ off Peru. The wide distribution of diazotrophs throughout the water column adds to the emerging view that the habitat of marine diazotrophs can be extended to low oxygen/high nitrate areas. Furthermore, our statistical analysis suggests that NO2− and PO43− are the major factors affecting diazotrophic distribution throughout the OMZ. In view of the predicted increase in ocean deoxygenation resulting from global warming, our findings indicate that the importance of OMZs as niches for N2 fixation may increase in the futur
    Type: Article , PeerReviewed
    Format: text
    Format: text
    DOI: 10.1038/ismej.2014.71
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    OceanRep: Article in a Scientific Journal - peer-reviewed
  • 8
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    Giant Hydrogen Sulfide Plume in the Oxygen Minimum Zone off Peru Supports Chemolithoautotrophy (2013)
    Public Library of Science
    In:  PLoS ONE, 8 (8). e68661.
    Details
    Publication Date: 2019-09-23
    Description: In Eastern Boundary Upwelling Systems nutrient-rich waters are transported to the ocean surface, fuelling high photoautotrophic primary production. Subsequent heterotrophic decomposition of the produced biomass increases the oxygen-depletion at intermediate water depths, which can result in the formation of oxygen minimum zones (OMZ). OMZs can sporadically accumulate hydrogen sulfide (H2S), which is toxic to most multicellular organisms and has been implicated in massive fish kills. During a cruise to the OMZ off Peru in January 2009 we found a sulfidic plume in continental shelf waters, covering an area 〉5500 km2, which contained ~2.2×104 tons of H2S. This was the first time that H2S was measured in the Peruvian OMZ and with ~440 km3 the largest plume ever reported for oceanic waters. We assessed the phylogenetic and functional diversity of the inhabiting microbial community by high-throughput sequencing of DNA and RNA, while its metabolic activity was determined with rate measurements of carbon fixation and nitrogen transformation processes. The waters were dominated by several distinct γ-, δ- and ε-proteobacterial taxa associated with either sulfur oxidation or sulfate reduction. Our results suggest that these chemolithoautotrophic bacteria utilized several oxidants (oxygen, nitrate, nitrite, nitric oxide and nitrous oxide) to detoxify the sulfidic waters well below the oxic surface. The chemolithoautotrophic activity at our sampling site led to high rates of dark carbon fixation. Assuming that these chemolithoautotrophic rates were maintained throughout the sulfidic waters, they could be representing as much as ~30% of the photoautotrophic carbon fixation. Postulated changes such as eutrophication and global warming, which lead to an expansion and intensification of OMZs, might also increase the frequency of sulfidic waters. We suggest that the chemolithoautotrophically fixed carbon may be involved in a negative feedback loop that could fuel further sulfate reduction and potentially stabilize the sulfidic OMZ waters
    Type: Article , PeerReviewed
    Format: text
    DOI: 10.1371/journal.pone.0068661
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    OceanRep: Article in a Scientific Journal - peer-reviewed
  • 9
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    Contribution of chemolithoautotrophes to dark primary production during asulfidic event in the Peruvian upwelling (2014)
    In:  [Poster] In: 15. International Symposium on Microbiology Ecology, 24.-19.08.2014, Seoul, South Korea .
    Details
    Publication Date: 2014-12-02
    Type: Conference or Workshop Item , NonPeerReviewed
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    OceanRep: Poster
  • 10
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    The effect of nutrient supply ratios on organic matter dynamics, phytoplankton community composition and diazotrophy in the eastern tropical South Pacific (2015)
    In:  [Poster] In: AGU Fall Meeting 2015, 14.-18.12.2015, San Francisco, USA .
    Details
    Publication Date: 2016-01-27
    Description: Upwelling of nutrient loaded water masses with low inorganic nitrogen (N) to phosphorus (P) ratios is thought to favor non-Redfield primary production by phytoplankton species adapted to exponential growth. Additionally, an excess of P (P*) in OMZ-influenced waters is also supposed to provide a niche for nitrogen fixing organisms. In order to assess the influence of low inorganic nutrient ratios on the stoichiometry and composition of primary producers, biogeochemical measurements were carried out in the eastern tropical South Pacific during R/V Meteor cruise M93. A succession of different functional types of phytoplankton was observed along onshore – offshore transects with diatoms dominating the productive upwelling region, while haptophytes, cryptophytes and crysophytes prevailed in the more oligotrophic open ocean. Simultaneously, particulate organic nitrogen to phosphorus ratios increased with increasing distance from shore. The stoichiometry of organic matter, however, always exceeded ratios of 16:1, although nutrient supply ratios were below Redfield proportions in the whole sampling area. A considerable amount of P* was detected in the surface ocean layer above the shelf, which decreased as water masses were advected beyond the shelf slope. Phytoplankton pigment analyses with HPLC revealed the existence of diazotrophic marker pigments in the study area, hinting towards a local replenishment of the N-deficit via nitrogen fixation.
    Type: Conference or Workshop Item , NonPeerReviewed
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    OceanRep: Poster
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