Description: Oxygen minimum zones are expanding globally, and at present account for around 20-40% of oceanic nitrogen loss. Heterotrophic denitrification and anammox-anaerobic ammonium oxidation with nitrite-are responsible for most nitrogen loss in these low-oxygen waters. Anammox is particularly significant in the eastern tropical South Pacific, one of the largest oxygen minimum zones globally. However, the factors that regulate anammox-driven nitrogen loss have remained unclear. Here, we present a comprehensive nitrogen budget for the eastern tropical South Pacific oxygen minimum zone, using measurements of nutrient concentrations, experimentally determined rates of nitrogen transformation and a numerical model of export production. Anammox was the dominant mode of nitrogen loss at the time of sampling. Rates of anammox, and related nitrogen transformations, were greatest in the productive shelf waters, and tailed off with distance from the coast. Within the shelf region, anammox activity peaked in both upper and bottom waters. Overall, rates of nitrogen transformation, including anammox, were strongly correlated with the export of organic matter. We suggest that the sinking of organic matter, and thus the release of ammonium into the water column, together with benthic ammonium release, fuel nitrogen loss from oxygen minimum zones.

Description: The fate of the organic matter (OM) produced by marine life controls the major biogeochemical cycles of the Earth's system. The OM produced through photosynthesis is either preserved, exported towards sediments or degraded through remineralisation in the water column. The productive eastern boundary upwelling systems (EBUSs) associated with oxygen minimum zones (OMZs) would be expected to foster OM preservation due to low O2 conditions. But their intense and diverse microbial activity should enhance OM degradation. To investigate this contradiction, sediment traps were deployed near the oxycline and in the OMZ core on an instrumented moored line off Peru. Data provided high-temporal-resolution O2 series characterising two seasonal steady states at the upper trap: suboxic ([O2] 〈 25µmolkg−1) and hypoxic–oxic (15 〈 [O2] 〈 160µmolkg−1) in austral summer and winter–spring, respectively. The OMZ vertical transfer efficiency of particulate organic carbon (POC) between traps (Teff) can be classified into three main ranges (high, intermediate, low). These different Teff ranges suggest that both predominant preservation (high Teff 〉 50%) and remineralisation (intermediate Teff 20 〈 50% or low Teff 〈 6%) configurations can occur. An efficient OMZ vertical transfer (Teff 〉 50%) has been reported in summer and winter associated with extreme limitation in O2 concentrations or OM quantity for OM degradation. However, higher levels of O2 or OM, or less refractory OM, at the oxycline, even in a co-limitation context, can decrease the OMZ transfer efficiency to below 50%. This is especially true in summer during intraseasonal wind-driven oxygenation events. In late winter and early spring, high oxygenation conditions together with high fluxes of sinking particles trigger a shutdown of the OMZ transfer (Teff 〈 6%). Transfer efficiency of chemical elements composing the majority of the flux (nitrogen, phosphorus, silica, calcium carbonate) follows the same trend as for carbon, with the lowest transfer level being in late winter and early spring. Regarding particulate isotopes, vertical transfer of δ15N suggests a complex pattern of 15N impoverishment or enrichment according to Teff modulation. This sensitivity of OM to O2 fluctuations and particle concentration calls for further investigation into OM and O2-driven remineralisation processes. This should include consideration of the intermittent behaviour of OMZ towards OM demonstrated in past studies and climate projections.

Description: Dissolved oxygen in sea water affects marine habitats and biogeochemical cycles. Oceanic zones with oxygen deficits represent 7% of the volume and 8% of the area of the oceans, and are thought to be expanding. One of the most pronounced lies in the region off Peru, where mesoscale activity in the form of fronts and eddies is strong. Here, we study the dynamics of the Peruvian oxygen minimum zone in a Lagrangian framework, using a coupled physical-biogeochemical numerical model and finite-size Lyapunov exponent fields, to evaluate the role of mesoscale activity. We find that, at depths between 380 and 600 m, mesoscale structures have two distinct roles. First, their mean positions and paths delimit and maintain the oxygen minimum zone boundaries. Second, their high-frequency fluctuations inject oxygen across the oxygen minimum zone boundaries and eddy fluxes are one order of magnitude higher than mean oxygen fluxes. We conclude that these eddy fluxes contribute to the ventilation of the Peruvian oxygen minimum zone.

Description: Oxygen minimum zones are expanding globally, and at present account for around 20–40% of oceanic nitrogen loss. Heterotrophic denitrification and anammox—anaerobic ammonium oxidation with nitrite—are responsible for most nitrogen loss in these low-oxygen waters. Anammox is particularly significant in the eastern tropical South Pacific, one of the largest oxygen minimum zones globally. However, the factors that regulate anammox-driven nitrogen loss have remained unclear. Here, we present a comprehensive nitrogen budget for the eastern tropical South Pacific oxygen minimum zone, using measurements of nutrient concentrations, experimentally determined rates of nitrogen transformation and a numerical model of export production. Anammox was the dominant mode of nitrogen loss at the time of sampling. Rates of anammox, and related nitrogen transformations, were greatest in the productive shelf waters, and tailed off with distance from the coast. Within the shelf region, anammox activity peaked in both upper and bottom waters. Overall, rates of nitrogen transformation, including anammox, were strongly correlated with the export of organic matter. We suggest that the sinking of organic matter, and thus the release of ammonium into the water column, together with benthic ammonium release, fuel nitrogen loss from oxygen minimum zones.

Description: In Eastern Boundary Upwelling Systems nutrient-rich waters are transported to the ocean surface, fuelling high photoautotrophic primary production. Subsequent heterotrophic decomposition of the produced biomass increases the oxygen-depletion at intermediate water depths, which can result in the formation of oxygen minimum zones (OMZ). OMZs can sporadically accumulate hydrogen sulfide (H2S), which is toxic to most multicellular organisms and has been implicated in massive fish kills. During a cruise to the OMZ off Peru in January 2009 we found a sulfidic plume in continental shelf waters, covering an area 〉5500 km2, which contained ~2.2×104 tons of H2S. This was the first time that H2S was measured in the Peruvian OMZ and with ~440 km3 the largest plume ever reported for oceanic waters. We assessed the phylogenetic and functional diversity of the inhabiting microbial community by high-throughput sequencing of DNA and RNA, while its metabolic activity was determined with rate measurements of carbon fixation and nitrogen transformation processes. The waters were dominated by several distinct γ-, δ- and ε-proteobacterial taxa associated with either sulfur oxidation or sulfate reduction. Our results suggest that these chemolithoautotrophic bacteria utilized several oxidants (oxygen, nitrate, nitrite, nitric oxide and nitrous oxide) to detoxify the sulfidic waters well below the oxic surface. The chemolithoautotrophic activity at our sampling site led to high rates of dark carbon fixation. Assuming that these chemolithoautotrophic rates were maintained throughout the sulfidic waters, they could be representing as much as ~30% of the photoautotrophic carbon fixation. Postulated changes such as eutrophication and global warming, which lead to an expansion and intensification of OMZs, might also increase the frequency of sulfidic waters. We suggest that the chemolithoautotrophically fixed carbon may be involved in a negative feedback loop that could fuel further sulfate reduction and potentially stabilize the sulfidic OMZ waters

Description: The connection between the equatorial mean circulation and the oxygen minimum zone (OMZ) in the Eastern Tropical Pacific is investigated through sensitivity experiments with a high-resolution coupled physical-biogeochemical model. A validation against in situ observations indicates a realistic simulation of the vertical and horizontal oxygen distribution by the model. Two sets of climatological open-boundary conditions for the physical variables, which differ slightly with respect to the intensity and vertical structure of the Equatorial Current System, are shown to lead to contrasting characteristics of the simulated OMZ dynamics. From a Lagrangian perspective, the mean differences near the coast originate to a large extent from the different transport of deoxygenated waters by the secondary Tsuchiya Jet (secondary Southern Subsurface Countercurrent, sSSCC). The O2 budget further indicates a large difference in the balance between tendency terms, with advection exhibiting the largest difference between both simulations, which is shown to result from both linear and nonlinear advection. At regional scale, we also find that the variability of the physical contribution to the rate of O2 change is one order of magnitude larger than the variability associated with the biogeochemical contribution, which originates from internal high-frequency variability. Overall our study illustrates the large sensitivity of the OMZ dynamics to the equatorial circulation.

Description: This review focuses on critical issues in ocean–atmosphere exchange that will be addressed by new research strategies developed by the international Surface Ocean–Lower Atmosphere Study (SOLAS) research community. Eastern boundary upwelling systems are important sites for CO2 and trace gas emission to the atmosphere, and the proposed research will examine how heterotrophic processes in the underlying oxygen-deficient waters interact with the climate system. The second regional research focus will examine the role of sea-ice biogeochemistry and its interaction with atmospheric chemistry. Marine aerosols are the focus of a research theme directed at understanding the processes that determine their abundance, chemistry and radiative properties. A further area of aerosol-related research examines atmospheric nutrient deposition in the surface ocean, and how differences in origin, atmospheric processing and composition influence surface ocean biogeochemistry. Ship emissions are an increasing source of aerosols, nutrients and toxins to the atmosphere and ocean surface, and an emerging area of research will examine their effect on ocean biogeochemistry and atmospheric chemistry. The primary role of SOLAS is to coordinate coupled multi-disciplinary research within research strategies that address these issues, to achieve robust representation of critical ocean–atmosphere exchange processes in Earth System models.

Description: While observations suggest a long-term expansion of the Oxygen Minimum Zone (OMZ) in the South Eastern Pacific (SEP), it also exhibits a large interannual to decadal variability in its upper and lower limits. The uncertainty of the fate of the SEP OMZ in a warmer climate as simulated by Earth system models also questions to which extent natural variability in the OMZ can obscure the detection of externally forced trends. Here we analyze long-term simulations from a hierarchy of models of the OMZ off Peru and Chile and show that a significant share of the variability is not linearly related to climate modes (including ENSO), suggesting that it originates from internal dynamics associated to both local non-linear physical and biogeochemical processes. Still the OMZ volume tends to shrink during strong Eastern Pacific El Niño while it expands during La Niña and Central Pacific El Niño events. It is shown in particular that La Niña and strong El Niño events significantly modulate the OMZ volume through the transport of water masses of equatorial origin by the Peru/Chile undercurrent and the propagation of extra-tropical Rossby waves. Implications of our results are discussed in terms of the challenge for developing an Eastern Pacific observing system in the frame of the TPOS2020 program, considering the time of emergence for climate-trend detection above background variability.