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  • 1
    Publication Date: 2024-04-02
    Description: We describe year-long experiments in which back reef and fore reef (17-m depth) communities from Moorea, French Polynesia, were incubated outdoors under pCO2 regimes reflecting endpoints of representative concentration pathways (RCPs) expected by the end the century. Incubations were completed in 3–4 flumes (5.0 × 0.3 m, 500 L) in which seawater was refreshed and circulated at 0.1 m s-1, and the response of the communities was evaluated monthly by measurements of net community calcification (NCC) and net community photosynthesis (NCP).
    Keywords: Alkalinity, total; Aragonite saturation state; Benthos; Bicarbonate ion; Calcification/Dissolution; Calcification rate of calcium carbonate; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); Coverage; Date; Day of experiment; Entire community; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Identification; Irradiance; Laboratory experiment; Local Time; Moorea_coral; Net calcification rate of calcium carbonate; Net photosynthesis rate; Net photosynthesis rate, oxygen; Number; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Period; pH; Potentiometric; Potentiometric titration; Primary production/Photosynthesis; Rocky-shore community; Salinity; South Pacific; Temperature, water; Time in hours; Treatment: partial pressure of carbon dioxide; Tropical; Type of community; Type of study
    Type: Dataset
    Format: text/tab-separated-values, 28438 data points
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2024-03-15
    Description: Ocean acidification (OA) is a major threat to coral reefs, which are built by calcareous species. However, long-term assessments of the impacts of OA are scarce, limiting the understanding of the capacity of corals and coralline algae to acclimatize to high partial pressure of carbon dioxide (pCO2) levels. Species-specific sensitivities to OA are influenced by its impacts on chemistry within the calcifying fluid (CF). Here, we investigate the capacity of multiple coral and calcifying macroalgal species to acclimatize to elevated pCO2 by determining their chemistry in the CF during a year-long experiment. We found no evidence of acclimatization to elevated pCO2 across any of the tested taxa. The effects of increasing seawater pCO2 on the CF chemistry were rapid and persisted until the end of the experiment. Our results show that acclimatization of the CF chemistry does not occur within one year, which confirms the threat of OA for future reef accretion and ecological function.
    Keywords: Acid-base regulation; Acropora pulchra; Alkalinity, total; Animalia; Aragonite saturation state; Benthic animals; Benthos; Bicarbonate ion; Biomass/Abundance/Elemental composition; Boron/Calcium ratio; Calcification/Dissolution; Calcification rate of calcium carbonate; Calcifying fluid, dissolved inorganic carbon; Calcifying fluid, pH; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chlorophyta; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Halimeda minima; Identification; Laboratory experiment; Lithophyllum kotschyanum; Macroalgae; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Plantae; Pocillopora verrucosa; Porites sp.; Potentiometric; Potentiometric titration; Psammocora profundacella; Ratio; Rhodophyta; Salinity; South Pacific; Species; Species interaction; Temperature, water; Treatment: partial pressure of carbon dioxide; Tropical; Type of study; δ11B
    Type: Dataset
    Format: text/tab-separated-values, 4181 data points
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2024-03-15
    Description: Coral reefs are threatened by ocean acidification (OA), which depresses net calcification of corals, calcified algae, and coral reef communities. These effects have been quantified for many organisms, but most experiments last weeks-to-months, and do not test for effects on community structure. Here, the effects of OA on back reef communities from Mo'orea, French Polynesia (17.492 S, 149.826 W), were tested from 12 November 2015 to 16 November 2016 in outdoor flumes maintained at mean pCO2 levels of 364 µatm, 564 µatm, 761 µatm, and 1067 µatm. The communities consisted of four corals and two calcified algae, with change in mass (Gnet, a combination of gross accretion and dissolution) and percent cover recorded monthly. For massive Porites and Montipora spp., Gnet differed among treatments, and at 1067 µatm (relative to ambient) was reduced and still positive; for Porolithon onkodes, all of which died, Gnet was negative at high pCO2, revealing dissolution (sample sizes were too small for analysis of Gnet for other taxa). Growth rates (% cover month−1) were unaffected by pCO2 for Montipora spp., P. rus, Pocillopora verrucosa, and Lithophyllum kotschyanum, but were depressed for massive Porites at 564 µatm. Multivariate community structure changed among seasons, and the variation under all elevated pCO2 treatments differed from that recorded at 364 µatm, and was greatest under 564 µatm and 761 µatm pCO2. Temporal variation in multivariate community structure could not be attributed solely to the effects of OA on the chemical and physical properties of seawater. Together, these results suggest that coral reef community structure may be more resilient to OA than suggested by the negative effects of high pCO2 on Gnet of their component organisms.
    Keywords: Alkalinity, total; Animalia; Aragonite saturation state; Area; Benthic animals; Benthos; Bicarbonate ion; Calcification/Dissolution; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Coast and continental shelf; Community composition and diversity; Containers and aquaria (20-1000 L or 〈 1 m**2); Dry mass; Entire community; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Group; Identification; Laboratory experiment; Lithophyllum kotschyanum; Macroalgae; massive Porites; Month; Montipora sp.; Moorea_coral; Number; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Plantae; Pocillopora verrucosa; Porites rus; Porolithon onkodes; Potentiometric; Potentiometric titration; Rhodophyta; Rocky-shore community; Salinity; Single species; South Pacific; Species; Temperature, water; Treatment: partial pressure of carbon dioxide; Tropical; Type of study; Year of sampling
    Type: Dataset
    Format: text/tab-separated-values, 48833 data points
    Location Call Number Limitation Availability
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  • 4
    Publication Date: 2021-07-21
    Description: Large benthic foraminifera are major carbonate components in tropical carbonate platforms, important carbonate producers, stratigraphic tools and powerful bioindicators (proxies) of environmental change. The application of large benthic foraminifera in tropical coral reef environments has gained considerable momentum in recent years. These modern ecological assessments are often carried out by micropalaeontologists or ecologists with expertise in the identification of foraminifera. However, large benthic foraminifera have been under‐represented in favour of macro reef‐builders, for example, corals and calcareous algae. Large benthic foraminifera contribute about 5% to modern reef‐scale carbonate sediment production. Their substantial size and abundance are reflected by their symbiotic association with the living algae inside their tests. When the foraminiferal holobiont (the combination between the large benthic foraminifera host and the microalgal photosymbiont) dies, the remaining calcareous test renourishes sediment supply, which maintains and stabilizes shorelines and low‐lying islands. Geological records reveal episodes (i.e. late Palaeocene and early Eocene epochs) of prolific carbonate production in warmer oceans than today, and in the absence of corals. This begs for deeper consideration of how large benthic foraminifera will respond under future climatic scenarios of higher atmospheric carbon dioxide (pCO2) and to warmer oceans. In addition, studies highlighting the complex evolutionary associations between large benthic foraminifera hosts and their algal photosymbionts, as well as to associated habitats, suggest the potential for increased tolerance to a wide range of conditions. However, the full range of environments where large benthic foraminifera currently dwell is not well‐understood in terms of present and future carbonate production, and impact of stressors. The evidence for acclimatization, at least by a few species of well‐studied large benthic foraminifera, under intensifying climate change and within degrading reef ecosystems, is a prelude to future host–symbiont resilience under different climatic regimes and habitats than today. This review also highlights knowledge gaps in current understanding of large benthic foraminifera as prolific calcium carbonate producers across shallow carbonate shelf and slope environments under changing ocean conditions.
    Description: Minerva Foundation http://dx.doi.org/10.13039/501100001658
    Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659
    Keywords: 561 ; Bioindicators ; carbonate engineers ; climate change ; environmental stressors ; ocean acidification ; photosymbionts ; sea‐level rise ; water quality
    Type: article
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  • 5
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: Edmunds et al. 2019b: Sizes of organisms not fixed to flume floor
    Description: These data describe the mobile fauna in the flumes that were not fixed to the bottom of the flume. These data are results of an experiment incubating a back reef community from Moorea, French Polynesia, for one year at high pCO2 (published in Edmunds et al. 2019) from Nov of 2015 to Nov of 2016. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/793628
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1415268
    Keywords: Ocean acidification ; OA ; Flume ; LTER ; Coral reefs ; Moorea ; Moorea Coral Reef LTER ; Coral community
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
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  • 6
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-10-31
    Description: Dataset: Edmunds et al. 2019b: Sizes of organisms fixed to flume floor
    Description: These data describe the fauna that was secured to a metal grid in the bottom of the flume. These data are results of an experiment incubating a back reef community from Moorea, French Polynesia, for one year at high pCO2 (published in Edmunds et al. 2019) from Nov of 2015 to Nov of 2016. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/793674
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1415268
    Keywords: Ocean acidification ; OA ; Flume ; LTER ; Coral reefs ; Moorea ; Moorea Coral Reef LTER ; Coral community
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
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  • 7
    Publication Date: 2022-10-31
    Description: Dataset: Edmunds et al. 2019b: Sizes of organisms used to calculate growth and for community analysis 
    Description: These data include sizes of organisms used to calculate growth and for community analysis and percent cover of each organism described from planar photographs. These data are results of an experiment incubating a back reef community from Moorea, French Polynesia, for one year at high pCO2 (published in Edmunds et al. 2019) from Nov of 2015 to Nov of 2016. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/793682
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1415268
    Keywords: Ocean acidification ; OA ; Flume ; LTER ; Coral reefs ; Moorea ; Moorea Coral Reef LTER ; Coral community
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
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  • 8
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Doo, S. S., Kealoha, A., Andersson, A., Cohen, A. L., Hicks, T. L., Johnson, Z., I., Long, M. H., McElhany, P., Mollica, N., Shamberger, K. E. F., Silbiger, N. J., Takeshita, Y., & Busch, D. S. The challenges of detecting and attributing ocean acidification impacts on marine ecosystems. ICES Journal of Marine Science, 77(7-8), (2020): 2411-2422, https://doi.org/10.1093/icesjms/fsaa094.
    Description: A substantial body of research now exists demonstrating sensitivities of marine organisms to ocean acidification (OA) in laboratory settings. However, corresponding in situ observations of marine species or ecosystem changes that can be unequivocally attributed to anthropogenic OA are limited. Challenges remain in detecting and attributing OA effects in nature, in part because multiple environmental changes are co-occurring with OA, all of which have the potential to influence marine ecosystem responses. Furthermore, the change in ocean pH since the industrial revolution is small relative to the natural variability within many systems, making it difficult to detect, and in some cases, has yet to cross physiological thresholds. The small number of studies that clearly document OA impacts in nature cannot be interpreted as a lack of larger-scale attributable impacts at the present time or in the future but highlights the need for innovative research approaches and analyses. We summarize the general findings in four relatively well-studied marine groups (seagrasses, pteropods, oysters, and coral reefs) and integrate overarching themes to highlight the challenges involved in detecting and attributing the effects of OA in natural environments. We then discuss four potential strategies to better evaluate and attribute OA impacts on species and ecosystems. First, we highlight the need for work quantifying the anthropogenic input of CO2 in coastal and open-ocean waters to understand how this increase in CO2 interacts with other physical and chemical factors to drive organismal conditions. Second, understanding OA-induced changes in population-level demography, potentially increased sensitivities in certain life stages, and how these effects scale to ecosystem-level processes (e.g. community metabolism) will improve our ability to attribute impacts to OA among co-varying parameters. Third, there is a great need to understand the potential modulation of OA impacts through the interplay of ecology and evolution (eco–evo dynamics). Lastly, further research efforts designed to detect, quantify, and project the effects of OA on marine organisms and ecosystems utilizing a comparative approach with long-term data sets will also provide critical information for informing the management of marine ecosystems.
    Description: SSD was funded by NSF OCE (grant # 1415268). DSB and PM were supported by the NOAA Ocean Acidification Program and Northwest Fisheries Science Center, MHL was supported by NSF OCE (grant # 1633951), ZIJ was supported by NSF OCE (grant # 1416665) and DOE EERE (grant #DE-EE008518), NJS was supported by NSF OCE (grant # 1924281), ALC was supported by NSF OCE (grant # 1737311), and AA was supported by NSF OCE (grant # 1416518). KEFS, AK, and TLH were supported by Texas A&M University. This is CSUN Marine Biology contribution (# 306).
    Repository Name: Woods Hole Open Access Server
    Type: Article
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