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  • Frontiers  (188)
  • PANGAEA  (45)
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  • 1
    Publication Date: 2021-02-08
    Description: To enable successful management of marine bioinvasions, timely and robust scientific advice is required. This knowledge should inform managers and stakeholders on the magnitude of a pressure (rate of human-mediated introductions), the environmental state of an ecosystem (impacts of non-indigenous species), and the success of management response (prevention, eradication, mitigation). This advice often relies on baseline biodiversity information in the form of measureable parameters (metrics). This can be derived from conventional approaches such as visual surveys, but also by utilizing environmental DNA/RNA-based molecular techniques, which are increasingly being touted as promising tools for assessing biodiversity and detecting rare or invasive species. Depending on the stage of incursion, each approach has merits and limitations. In this review we assess the performance of biosecurity-relevant biodiversity parameters derived from eDNA/eRNA samples and discuss the results in relation to different stages of invasion and management applications. The overall performance of considered methods ranged between 42 and 90% based on defined criteria, with target-specific approaches scoring higher for respective biosecurity applications, followed by eDNA metabarcoding. Caveats are discussed along with avenues which may enhance these techniques and their successful uptake for marine biosecurity surveillance and management. To facilitate and encourage uptake of these techniques, there is a need for an international collaborative framework aimed at unifying molecular sampling and analysis methodologies. Improvement of quantitative capacity and cost-efficiency will also enhance their integration in biosecurity programmes.
    Type: Article , PeerReviewed
    Format: text
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  • 2
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    Frontiers
    In:  EPIC3Frontiers in Marine Science, Frontiers, 10, pp. 1234776-1234776, ISSN: 2296-7745
    Publication Date: 2024-02-13
    Description: Collaborations between artists and ocean scientists are becoming increasingly frequent. As the UN Ocean Decade (2021-2030) stresses the importance of engaging with the public, there is a growing interest in using art as a tool for communication as well as for scientific exploration and experimentation. This mini-review charts the current academic research on art-science collaborations and the ocean, focusing on literature where artists and scientists work together to produce something based on scientific research. The study finds that these relationships are never apolitical, are complex and develop differently depending on each project. In sum the paper will highlight that although the academic literature is limited, its diversity has the potential to reach numerous academic disciplines and that focusing on process and engagement should be a direction for further research to help broaden the academic reach of these important oceanic knowledges.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
    Format: application/pdf
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  • 3
    Publication Date: 2022-01-31
    Description: The Global Ocean Ship-Based Hydrographic Investigations Program (GO-SHIP) provides a globally coordinated network and oversight of 55 sustained decadal repeat hydrographic reference lines. GO-SHIP is part of the global ocean/climate observing systems (GOOS/GCOS) for study of physical oceanography, the ocean carbon, oxygen and nutrient cycles, and marine biogeochemistry. GO-SHIP enables assessment of the ocean sequestration of heat and carbon, changing ocean circulation and ventilation patterns, and their effects on ocean health and Earth's climate. Rapid quality control and open data release along with incorporation of the GO-SHIP effort in the Joint Technical Commission for Oceanography and Marine Meteorology (JCOMM) in situ Observing Programs Support Center (JCOMMOPS) have increased the profile of, and participation in, the program and led to increased data use for a range of efforts. In addition to scientific discovery, GO-SHIP provides climate quality observations for ongoing calibration of measurements from existing and new autonomous platforms. This includes biogeochemical observations for the nascent array of biogeochemical (BGC)-Argo floats; temperature and salinity for Deep Argo; and salinity for the core Argo array. GO-SHIP provides the relevant suite of global, full depth, high quality observations and co-located deployment opportunities that, for the foreseeable future, remain crucial to maintenance and evolution of Argo's unique contribution to climate science. The evolution of GO-SHIP from a program primarily focused on physical climate to increased emphasis on ocean health and sustainability has put an emphasis on the addition of essential ocean variables for biology and ecosystems in the program measurement suite. In conjunction with novel automated measurement systems, ocean color, particulate matter, and phytoplankton enumeration are being explored as GO-SHIP variables. The addition of biological and ecosystem measurements will enable GO-SHIP to determine trends and variability in these key indicators of ocean health. The active and adaptive community has sustained the network, quality and relevance of the global repeat hydrography effort through societally important scientific results, increased exposure, and interoperability with new efforts and opportunities within the community. Here we provide key recommendations for the continuation and growth of GO-SHIP in the next decade.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
    Format: text
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  • 4
    Publication Date: 2024-05-13
    Description: The ²³⁴Th-²³⁸U radioactive pair has been extensively used to evaluate the efficiency with which photosyntetically fixed carbon is exported from the surface ocean by means of the biological pump since the 90's. The seminal work of Buesseler et al. (1992) proposed that particulate organic carbon (POC) flux can be indirectly calculated from ²³⁴Th distributions if the ratio of POC to ²³⁴Th measured on sinking particles (POC:²³⁴Th) at the desired export depth is known. Since then, a huge amount of ²³⁴Th depth profiles have been collected using a variety of sampling instruments and strategies that have changed along years. This is a global oceanic compilation of ²³⁴Th measurements, that collects results from innumerable researchers and laboratories over a period exceeding 50 years. The present compilation is made of a total 223 datasets: 214 from studies published either in articles in referred journals, PhD thesis or repositories, and 9 unpublished datasets. Including measurements from JGOFS, VERTIGO and GEOTRACES programs, with sampling from approximately 5000 locations spanning all the oceans. The compilation includes total ²³⁴Th profiles, dissolved and particulate ²³⁴Th concentrations, and POC:²³⁴Th ratios (both from pumps and sediment traps) for two sizes classes (1-53 μm and 〈 53 μm) when available. Appropriate metadata have been included, including geographic location, date, and sample depth, among others. When available, we also include water temperature, salinity, ²³⁸U data and particulate organic nitrogen data. Data sources and methods information (including ²³⁸U and ²³⁴Th) are also detailed along with valuable information for future data analysis such as bloom stage and steady/non-steady state conditions at the sampling moment. This undertaking is a treasure of data to understand and quantify how oceanic carbon cycle functions and how it will change in future. The compilation can be downloaded in three different ways: 1) A single merged file including all the individual excel files. This option can be accessed under "Other version: More than 50 years of Th-234 data: a comprehensive global oceanic compilation (single xlsx file)". 2) A summary table that includes details from cruise, sampling dates, techniques applied, authors and DOI of the compiled ²³⁴Th data, among others, each line corresponds to a specific dataset. The table can be accessed by clicking ""View dataset as HTML" and downloaded in "Download dataset as tab-delimited text". 3) Individual Excel files for each dataset can be manually chosen from the summary table, corresponding to the complete ²³⁴Th dataset and metadata from a specific publication or program. This option is available by clicking "View dataset as HTML". Furthermore, all files referred to can be downloaded in one go as ZIP or TAR.
    Keywords: 234Th; Author(s); Binary Object; biological carbon pump; Carbon, organic, particulate/Thorium-234 ratio; carbon export; Chief scientist(s); Cruise/expedition; DATE/TIME; ELEVATION; Gear; GEOTRACES; Global marine biogeochemical cycles of trace elements and their isotopes; JGOFS; Joint Global Ocean Flux Study; Journal/report title; LATITUDE; LONGITUDE; Multiple cruises/expeditions; Ocean; Ocean and sea region; Period; POC flux; Project; Reference of data; Thorium-234, dissolved; Thorium-234, particulate; Thorium-234, total; Uniform resource locator/link to reference; Uranium-238; Vessel; Year of publication
    Type: Dataset
    Format: text/tab-separated-values, 4056 data points
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  • 5
    Publication Date: 2024-04-27
    Description: There is a growing need for past weather and climate data to support science and decision-making. This paper describes the compilation and the construction of a global multivariable (air temperature, pressure, precipitation sum, number of precipitation days) monthly instrumental climate database that encompasses a substantial body of the known early instrumental time series. The dataset contains series compiled from existing databases that start before 1890 (though continuing to the present) as well as a large amount of newly rescued data. All series underwent a quality control procedure and subdaily series were processed to monthly mean values. An inventory was compiled, and the collection was deduplicated based on coordinates and mutual correlations. The data are provided in a common format accompanied by the inventory. The collection totals 12452 meteorological records in 118 countries. The data has been merged from 18250 original data files. The data can be used for climate reconstructions and analyses. It is the most comprehensive global monthly climate data set for the preindustrial period.
    Keywords: A Palaeoreanalysis To Understand Decadal Climate Variability; de-duplication; early instrumental; GlobCover; PALAEO-RA; paleoclimatology; Paleometeorology; quality control; Time series
    Type: Dataset
    Format: application/zip, 24 datasets
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  • 6
    Publication Date: 2023-10-30
    Description: 〈jats:p〉In many of the Pacific Islands, local communities have long-held cultural and spiritual attachments to the sea, in particular to species and specific marine areas, processes, habitats, islands, and natural seabed formations. Traditional knowledge, customary marine management approaches and integrated relationships between biodiversity, ecosystems and local communities promote conservation and ensure that marine benefits are reaped in a holistic, sustainable and equitable manner. However, the interaction between local traditional knowledge, contemporary scientific approaches to marine resource management and specific regulatory frameworks has often been challenging. To some extent, the value of community practices and customary law, which have provided an incentive for regional cooperation and coordination around ocean governance, is acknowledged in several legal systems in the Pacific and a number of regional and international instruments, but this important connection can be further enhanced. In this article we present a science-based overview of the marine habitats that would be affected by deep seabed mining (DSM) along with an analysis of some traditional dimensions and cultural/societal aspects of marine resource management. We then assess whether the applicable legal frameworks at different levels attach sufficient importance to these traditional dimensions and to the human and societal aspects of seabed (mineral) resource management in the region. On the basis of this analysis, we identify best practices and formulate recommendations with regard to the current regulatory frameworks and seabed resource management approaches. Indeed, the policies and practices developed in the Pacific could well serve as a suitable model elsewhere to reconcile commercial, ecological, cultural and social values within the context of deep sea mineral exploitation in addition to sustaining the Human Well-being and Sustainable Livelihoods (HWSL) of the Pacific communities and the health of the Global Ocean.〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
    Format: application/pdf
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  • 7
    Publication Date: 2023-08-01
    Description: Zooplankton plays a major role in ocean food webs and biogeochemical cycles, and provides major ecosystem services as a main driver of the biological carbon pump and in sustaining fish communities. Zooplankton is also sensitive to its environment and reacts to its changes. To better understand the importance of zooplankton, and to inform prognostic models that try to represent them, spatially-resolved biomass estimates of key plankton taxa are desirable. In this study we predict, for the first time, the global biomass distribution of 19 zooplankton taxa (1-50 mm Equivalent Spherical Diameter) using observations with the Underwater Vision Profiler 5, a quantitative in situ imaging instrument. After classification of 466,872 organisms from more than 3,549 profiles (0-500 m) obtained between 2008 and 2019 throughout the globe, we estimated their individual biovolumes and converted them to biomass using taxa-specific conversion factors. We then associated these biomass estimates with climatologies of environmental variables (temperature, salinity, oxygen, etc.), to build habitat models using boosted regression trees. The results reveal maximal zooplankton biomass values around 60°N and 55°S as well as minimal values around the oceanic gyres. An increased zooplankton biomass is also predicted for the equator. Global integrated biomass (0-500 m) was estimated at 0.403 PgC. It was largely dominated by Copepoda (35.7%, mostly in polar regions), followed by Eumalacostraca (26.6%) Rhizaria (16.4%, mostly in the intertropical convergence zone). The machine learning approach used here is sensitive to the size of the training set and generates reliable predictions for abundant groups such as Copepoda (R2 ≈ 20-66%) but not for rare ones (Ctenophora, Cnidaria, R2 〈 5%). Still, this study offers a first protocol to estimate global, spatially resolved zooplankton biomass and community composition from in situ imaging observations of individual organisms. The underlying dataset covers a period of 10 years while approaches that rely on net samples utilized datasets gathered since the 1960s. Increased use of digital imaging approaches should enable us to obtain zooplankton biomass distribution estimates at basin to global scales in shorter time frames in the future.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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  • 8
    Publication Date: 2021-02-08
    Description: Silicon (Si) is the second most abundant element in the Earth’s crust and is an important nutrient in the ocean. The global Si cycle plays a critical role in regulating primary productivity and carbon cycling on the continents and in the oceans. Development of the analytical tools used to study the sources, sinks, and fluxes of the global Si cycle (e.g., elemental and stable isotope ratio data for Ge, Si, Zn, etc.) have recently led to major advances in our understanding of the mechanisms and processes that constrain the cycling of Si in the modern environment and in the past. Here, we provide background on the geochemical tools that are available for studying the Si cycle and highlight our current understanding of the marine, freshwater and terrestrial systems. We place emphasis on the geochemistry (e.g., Al/Si, Ge/Si, Zn/Si, δ13 C, δ15 N, δ18 O, δ30 Si) of dissolved and biogenic Si, present case studies, such as the Silicic Acid Leakage Hypothesis, and discuss challenges associated with the development of these environmental proxies for the global Si cycle. We also discuss how each system within the global Si cycle might change over time (i.e., sources, sinks, and processes) and the potential technical and conceptual limitations that need to be considered for future studies.
    Type: Article , PeerReviewed
    Format: text
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  • 9
    Publication Date: 2022-01-31
    Description: Ocean surface winds, currents, and waves play a crucial role in exchanges of momentum, energy, heat, freshwater, gases, and other tracers between the ocean, atmosphere, and ice. Despite surface waves being strongly coupled to the upper ocean circulation and the overlying atmosphere, efforts to improve ocean, atmospheric, and wave observations and models have evolved somewhat independently. From an observational point of view, community efforts to bridge this gap have led to proposals for satellite Doppler oceanography mission concepts, which could provide unprecedented measurements of absolute surface velocity and directional wave spectrum at global scales. This paper reviews the present state of observations of surface winds, currents, and waves, and it outlines observational gaps that limit our current understanding of coupled processes that happen at the air-sea-ice interface. A significant challenge for the coming decade of wind, current, and wave observations will come in combining and interpreting measurements from (a) wave-buoys and high-frequency radars in coastal regions, (b) surface drifters and wave-enabled drifters in the open-ocean, marginal ice zones, and wave-current interaction “hot-spots,” and (c) simultaneous measurements of absolute surface currents, ocean surface wind vector, and directional wave spectrum from Doppler satellite sensors.
    Type: Article , PeerReviewed
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  • 10
    Publication Date: 2024-02-07
    Description: In this paper, we outline the need for a coordinated international effort toward the building of an open-access Global Ocean Oxygen Database and ATlas (GO2DAT) complying with the FAIR principles (Findable, Accessible, Interoperable, and Reusable). GO2DAT will combine data from the coastal and open ocean, as measured by the chemical Winkler titration method or by sensors (e.g., optodes, electrodes) from Eulerian and Lagrangian platforms (e.g., ships, moorings, profiling floats, gliders, ships of opportunities, marine mammals, cabled observatories). GO2DAT will further adopt a community-agreed, fully documented metadata format and a consistent quality control (QC) procedure and quality flagging (QF) system. GO2DAT will serve to support the development of advanced data analysis and biogeochemical models for improving our mapping, understanding and forecasting capabilities for ocean O2 changes and deoxygenation trends. It will offer the opportunity to develop quality-controlled data synthesis products with unprecedented spatial (vertical and horizontal) and temporal (sub-seasonal to multi-decadal) resolution. These products will support model assessment, improvement and evaluation as well as the development of climate and ocean health indicators. They will further support the decision-making processes associated with the emerging blue economy, the conservation of marine resources and their associated ecosystem services and the development of management tools required by a diverse community of users (e.g., environmental agencies, aquaculture, and fishing sectors). A better knowledge base of the spatial and temporal variations of marine O2 will improve our understanding of the ocean O2 budget, and allow better quantification of the Earth’s carbon and heat budgets. With the ever-increasing need to protect and sustainably manage ocean services, GO2DAT will allow scientists to fully harness the increasing volumes of O2 data already delivered by the expanding global ocean observing system and enable smooth incorporation of much higher quantities of data from autonomous platforms in the open ocean and coastal areas into comprehensive data products in the years to come. This paper aims at engaging the community (e.g., scientists, data managers, policy makers, service users) toward the development of GO2DAT within the framework of the UN Global Ocean Oxygen Decade (GOOD) program recently endorsed by IOC-UNESCO. A roadmap toward GO2DAT is proposed highlighting the efforts needed (e.g., in terms of human resources).
    Type: Article , PeerReviewed
    Format: text
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