Description: The aim of the present work was to unravel which environmental drivers govern the dynamics of toxic dinoflagellate abundance as well as their associated paralytic shellfish toxins (PSTs), diarrhetic shellfish toxins (DSTs) and pectenotoxin-2 (PTX2) in Ambon Bay, Eastern Indonesia. Weather, biological and physicochemical parameters were investigated weekly over a 7-month period. Both PSTs and PTX2 were detected at low levels, yet they persisted throughout the research. Meanwhile, DSTs were absent. A strong correlation was found between total particulate PST and Gymnodinium catenatum cell abundance, implying that this species was the main producer of this toxin. PTX2 was positively correlated with Dinophysis miles cell abundance. Vertical mixing, tidal elevation and irradiance attenuation were the main environmental factors that regulated both toxins and cell abundances, while nutrients showed only weak correlations. The present study indicates that dinoflagellate toxins form a potential environmental, economic and health risk in this Eastern Indonesian bay.

Description: Against the background of a drastically increased demand of marine proteins, off-bottom, bivalve aquaculture, provides significant potential for production growth when moved into more energetic marine waters. Hence, research, industry and politics are currently proposing the development of new offshore sites. The highly energetic conditions at these sites present a challenging environment for bivalve aquaculture. In this work, physical experiments of suspended bivalves provide new knowledge on the commonly used design parameters: the drag and inertia coefficients. Live bivalves and manufactured surrogate models at a 1:1 scale were tested in a towing tank as well as under waves. The drag coefficient of live blue mussels was determined to be Cd = 1.6 for Reynolds numbers between 2.3 × 104 and 1.4 × 105. The inertia coefficient obtained from the wave tests was Cm = 2.1 for Keulegan Carpenter numbers KC 〈 10. In a pursuit to better understand the differences between live mussels and surrogates in laboratory conditions, the analysis revealed that appropriate surrogates can be identified. A method to determine the characteristic diameter of mussel dropper lines is suggested. The results facilitate the future design of aquaculture systems in high-energy environments and allow for an integration into numerical models.

Description: The use of assimilation tools for satellite validation requires true estimates of the accuracy of the reference data. Since its inception, the Network for Detection of Stratospheric Change (NDSC) has provided systematic lidar measurements of ozone and temperature at several places around the world that are well adapted for satellite validations. Regular exercises have been organised to ensure the data quality at each individual site. These exercises can be separated into three categories: large scale intercomparisons using multiple instruments, including a mobile lidar; using satellite observations as a geographic transfer standards to compare measurements at different sites; and comparative investigations of the analysis software. NDSC is a research network, so each system has its own history, design, and analysis, and has participated differently in validation campaigns. There are still some technological differences that may explain different accuracies. However, the comparison campaigns performed over the last decade have always proved to be very helpful in improving the measurements. To date, more efforts have been devoted to characterising ozone measurements than to temperature observations. The synthesis of the published works shows that the network can potentially be considered as homogeneous within +/-2% between 20-35 km for ozone and +/-1 K between 35-60 km for temperature. Outside this altitude range, larger biases are reported and more efforts are required. In the lower stratosphere, Raman channels seem to improve comparisons but such capabilities were not systematically compared. At the top of the profiles, more investigations on analysis methodologies are still probably needed. SAGE II and GOMOS appear to be excellent tools for future ozone lidar validations but need to be better coordinated and take more advantage of assimilation tools. Also, temperature validations face major difficulties caused by atmospheric tides and therefore require intercomparisons with the mobile systems, at all sites.

Description: Lake eutrophication is a pervasive problem globally, particularly serious in agricultural and densely pop- ulated areas. Whenever nutrients nitrogen and phosphorus do not limit phytoplankton growth directly, high growth rates will rapidly lead to biomass increases causing self-shading and light-limitation, and eventually CO2 depletion. The paradigm of phytoplankton limitation by nutrients and light is so perva- sively established, that the lack of nutrient limitation is ordinarily interpreted as sufficient evidence for the condition of light limitation, without considering the possibility of limitation by inorganic carbon. Here, we firstly evaluated how frequently CO2 undersaturation occurs in a set of eutrophic lakes in the Pampa plains. Our results confirm that conditions of CO2 undersaturation develop much more frequently (yearly 34%, summer 44%) in these agriculturally impacted lakes than in deep, temperate lakes in forested watersheds. Secondly, we used Generalized Additive Models to fit trends in CO2 concentration considering three drivers: total incident irradiance, chlorophyll a concentration, and lake depth; in eight multi-year datasets from eutrophic lakes from Europe, North and South America, Asia and New Zealand. CO2 deple- tion was more often observed at high irradiance levels, and shallow water. CO2 depletion also occurred at high chlorophyll concentration. Finally, we identified occurrences of light- and carbon-limitation at the whole-lake scale. The different responses of chlorophyll a and CO2 allowed us to develop criteria for detecting conditions of CO2 limitation. For the first time, we pro- vided whole-lake evidence of carbon limitation of phytoplankton biomass. CO2 increases and eutrophi- cation represent two major and converging environmental problems that have additive and contrasting effects, promoting phytoplankton, and also leading to carbon depletion. Their interactions deserve further exploration and imaginative approaches to deal with their effects.

Description: The Southern Ocean near the Western Antarctic Peninsula (WAP) is strongly affected by climate change resulting in warmer air temperature, accompanied with reduced sea ice coverage, increased sea water temperature and potential changes in the abundances of two key grazer species Salpa thompsoni (salp) and Euphausia superba (Antarctic krill). While salp abundance is hypothesized to increase, krill abundance is hypothesized to decline with dramatic consequences for the entire food web of the Southern Ocean. A better understanding of the biotic interaction between krill and salps and their population dynamics is thus crucial. However, the life cycle of salps is complicated and barely understood. Therefore, we have developed an individual-based model describing the whole life cycle to better understand the population dynamics of salps and the conditions for blooms. The model has been used to explore if and under what conditions the empirical pattern of large variability in observed salp abundances at the WAP, generated by the long-term data of the US Antarctic Marine Living Resources Program (AMLR) can emerge from a small seeding population. The model reproduced this empirical pattern if daily growth rates of oozoids were higher than previously reported for the WAP (mean growth rate for oozoids ~ 1 mm d−1) and if growth rates of blastozooids were lower (mean growth rate ~ 0.2 mm d−1). The model suggests that a prerequisite for local salp blooms requires a small founding population in early spring. With climate change it has been suggested that more frequent and earlier transport of salps into the WAP or winter survival will occur. Hence, the risk of salp blooms in the WAP is likely to substantially increase. These findings highlight the importance for an improved quantitative understanding of how primary production and the southward advection of salps will be impacted by climate change.

Description: Dispersal and foodweb dynamics have long been studied in separate models. However, over the past decades, it has become abundantly clear that there are intricate interactions between local dynamics and spatial patterns. Trophic meta-communities, i.e. meta-foodwebs, are very complex systems that exhibit complex and often counterintuitive dynamics. Over the past decade, a broad range of modelling approaches have been used to study these systems. In this paper, we review these approaches and the insights that they have revealed. We focus particularly on recent papers that study trophic interactions in spatially extensive settings and highlight the common themes that emerged in different models. There is overwhelming evidence that dispersal (and particularly intermediate levels of dispersal) benefits the maintenance of biodiversity in several different ways. Moreover, some insights have been gained into the effect of different habitat topologies, but these results also show that the exact relationships are much more complex than previously thought, highlighting the need for further research in this area. This article is part of the theme issue ‘Integrative research perspectives on marine conservation’.

Description: Whereas the conservation and management of biodiversity has become a key issue in environmental sciences and policy in general, the conservation of marine biodiversity faces additional challenges such as the challenges of accessing field sites (e.g. polar, deep sea), knowledge gaps regarding biodiversity trends, high mobility of many organisms in fluid environments, and ecosystem-specific obstacles to stakeholder engagement and governance. This issue comprises contributions from a diverse international group of scientists in a benchmarking volume for a common research agenda on marine conservation. We begin by addressing information gaps on marine biodiversity trends through novel approaches and technologies, then linking such information to ecosystem functioning through a focus on traits. We then leverage the knowledge of these relationships to inform theory aiming at predicting the future composition and functioning of marine communities. Finally, we elucidate the linkages between marine ecosystems and human societies by examining economic, management and governance approaches that contribute to effective marine conservation in practice. This article is part of the theme issue ‘Integrative research perspectives on marine conservation’.

Description: An accurate identification of species and communities is a prerequisite for analysing and recording biodiversity and community shifts. In the context of marine biodiversity conservation and management, this review outlines past, present and forward-looking perspectives on identifying and recording planktonic diversity by illustrating the transition from traditional species identification based on morphological diagnostic characters to full molecular genetic identification of marine assemblages. In this process, the article presents the methodological advancements by discussing progress and critical aspects of the crossover from traditional to novel and future molecular genetic identifications and it outlines the advantages of integrative approaches using the strengths of both morphological and molecular techniques to identify species and assemblages. We demonstrate this process of identifying and recording marine biodiversity on pelagic copepods as model taxon. Copepods are known for their high taxonomic and ecological diversity and comprise a huge variety of behaviours, forms and life histories, making them a highly interesting and well-studied group in terms of biodiversity and ecosystem functioning. Furthermore, their short life cycles and rapid responses to changing environments make them good indicators and core research components for ecosystem health and status in the light of environmental change. This article is part of the theme issue ‘Integrative research perspectives on marine conservation’.

Description: Late Miocene to Quaternary volcanic rocks from the frontal arc to the back-arc region of the Central Volcanic Zone in the Andes show a wide range of delta 11B values (+4 to -7 ‰) and boron concentrations (6 to 60 ppm). Positive delta 11B values of samples from the volcanic front indicate involvement of a 11B-enriched slab component, most likely derived from altered oceanic crust, despite the thick Andean continental lithosphere, and rule out a pure crust-mantle origin for these lavas. The delta 11B values and B concentrations in the lavas decrease systematically with increasing depth of the Wadati-Benioff Zone. This across-arc variation in delta 11B values and decreasing B/Nb ratios from the arc to the back-arc samples are attributed to the combined effects of B-isotope fractionation during progressive dehydration in the slab and a steady decrease in slab-fluid flux towards the back arc, coupled with a relatively constant degree of crustal contamination as indicated by similar Sr, Nd and Pb isotope ratios in all samples. Modelling of fluid-mineral B-isotope fractionation as a function of temperature fits the across-arc variation in delta 11B and we conclude that the B-isotope composition of arc volcanics is dominated by changing delta 11B composition of B-rich slab-fluids during progressive dehydration. Crustal contamination becomes more important towards the back-arc due to the decrease in slab-derived fluid flux. Because of this isotope fractionation effect, high delta 11B signatures in volcanic arcs need not necessarily reflect differences in the initial composition of the subducting slab. Three-component mixing calculations for slab-derived fluid, the mantle wedge and the continental crust based on B, Sr and Nd isotope data indicate that the slab-fluid component dominates the B composition of the fertile mantle and that the primary arc magmas were contaminated by an average addition of 15 to 30 % crustal material.