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  • 2015-2019  (17)
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  • 1
    Publication Date: 2023-03-25
    Keywords: 64PE393; 64PE393_10CTD; 64PE393_11CTD; 64PE393_12CTD; 64PE393_13CTD; 64PE393_14CTD; 64PE393_15CTD; 64PE393_16CTD; 64PE393_17CTD; 64PE393_18CTD; 64PE393_19CTD; 64PE393_1CTD; 64PE393_20CTD; 64PE393_21CTD; 64PE393_22CTD; 64PE393_23CTD; 64PE393_2CTD; 64PE393_3CTD; 64PE393_4CTD; 64PE393_5CTD; 64PE393_6CTD; 64PE393_7CTD; 64PE393_8CTD; 64PE393_9CTD; CTD/Rosette; CTD-RO; DATE/TIME; DEPTH, water; Event label; HCC; Hemiaulus hauckii; Latitude of event; Longitude of event; NIOZ_UU; NIOZ Royal Netherlands Institute for Sea Research, and Utrecht University; Pelagia; Rhizosolenia; Rhizosolenia clevei; Trichodesmium; Tropical North Atlantic
    Type: Dataset
    Format: text/tab-separated-values, 705 data points
    Location Call Number Limitation Availability
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  • 2
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    PANGAEA
    In:  Supplement to: Bale, Nicole Jane; Villareal, Tracy A; Hopmans, Ellen C; Brussaard, Corina P D; Besseling, Marc; Dorhout, Denise J C; Sinninghe Damsté, Jaap S; Schouten, Stefan (2018): C5 glycolipids of heterocystous cyanobacteria track symbiont abundance in the diatom Hemiaulus hauckii across the tropical North Atlantic. Biogeosciences, 15, 1-13
    Publication Date: 2023-01-13
    Description: TS2Diatom-diazotroph associations (DDAs) include marine heterocystous cyanobacteria found as exosymbionts and endosymbionts in multiple diatom species. Heterocysts are the site of N2 fixation and have thickened cell walls containing unique heterocyst glycolipids which maintain a low oxygen environment within the heterocyst. The endosymbiotic cyanobacterium Richelia intracellularis found in species of the diatom genus Hemiaulus and Rhizosolenia makes heterocyst glycolipids (HGs) which are composed of C30 and C32 diols and triols with pentose (C5) moieties that are distinct from limnetic cyanobacterial HGs with predominantly hexose (C6) moieties. Here we applied a method for analysis of intact polar lipids to the study of HGs in suspended particulate matter (SPM) and surface sediment from across the tropical North Atlantic. The study focused on the Amazon plume region, where DDAs are documented to form extensive surface blooms, in order to examine the utility of C5 HGs as markers for DDAs as well as their transportation to underlying sediments. C30 and C32 triols with C5 pentose moieties were detected in both marine SPM and surface sediments. We found a significant correlation between the water column concentration of these long-chain C5 HGs and DDA symbiont counts. In particular, the concentrations of both the C5 HGs (1-(O-ribose)-3,27,29-triacontanetriol (C5 HG30 triol) and 1-(O-ribose)-3,29,31-dotriacontanetriol (C5 HG32 triol)) in SPM exhibited a significant correlation with the number of Hemiaulus hauckii symbionts. This result strengthens the idea that long-chain C5 HGs can be applied as biomarkers for marine endosymbiotic heterocystous cyanobacteria. The presence of the same C5 HGs in surface sediment provides evidence that they are effectively transported to the sediment and hence have potential as biomarkers for studies of the contribution of DDAs to the paleomarine N cycle.
    Keywords: NIOZ_UU; NIOZ Royal Netherlands Institute for Sea Research, and Utrecht University
    Type: Dataset
    Format: application/zip, 4 datasets
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2023-03-03
    Keywords: 1-(O-ribose)-3,27,29-triacontanetriol; 1-(O-ribose)-3,29,31-dotriacontanetriol; 64PE393; 64PE393_10CTD; 64PE393_11CTD; 64PE393_12CTD; 64PE393_13CTD; 64PE393_14CTD; 64PE393_15CTD; 64PE393_16CTD; 64PE393_17CTD; 64PE393_18CTD; 64PE393_19CTD; 64PE393_1CTD; 64PE393_20CTD; 64PE393_21CTD; 64PE393_22CTD; 64PE393_23CTD; 64PE393_2CTD; 64PE393_3CTD; 64PE393_4CTD; 64PE393_5CTD; 64PE393_6CTD; 64PE393_7CTD; 64PE393_8CTD; 64PE393_9CTD; Chlorophyll a; CTD/Rosette; CTD-RO; DEPTH, water; Event label; HCC; Latitude of event; Longitude of event; NIOZ_UU; NIOZ Royal Netherlands Institute for Sea Research, and Utrecht University; Pelagia; Tropical North Atlantic
    Type: Dataset
    Format: text/tab-separated-values, 217 data points
    Location Call Number Limitation Availability
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  • 4
    Publication Date: 2023-03-03
    Keywords: 1-(O-ribose)-3,27,29-triacontanetriol; 1-(O-ribose)-3,27,29-triacontanetriol, standard deviation; 1-(O-ribose)-3,29,31-dotriacontanetriol; 1-(O-ribose)-3,29,31-dotriacontanetriol, standard deviation; 64PE393; 64PE393_10MUC; 64PE393_11MUC; 64PE393_12MUC; 64PE393_13MUC; 64PE393_14MUC; 64PE393_16MUC; 64PE393_17MUC; 64PE393_1MUC; 64PE393_20MUC; 64PE393_21MUC; 64PE393_22MUC; 64PE393_23MUC; 64PE393_3MUC; 64PE393_5MUC; 64PE393_7MUC; 64PE393_8MUC; 64PE393_9MUC; Carbon, organic, total; Carbon, organic, total, standard deviation; DEPTH, sediment/rock; Event label; HCC; Latitude of event; Longitude of event; MUC; MultiCorer; NIOZ_UU; NIOZ Royal Netherlands Institute for Sea Research, and Utrecht University; Pelagia; Tropical North Atlantic
    Type: Dataset
    Format: text/tab-separated-values, 102 data points
    Location Call Number Limitation Availability
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  • 5
    Publication Date: 2023-07-10
    Keywords: 64PE393; 64PE393_10CTD; 64PE393_11CTD; 64PE393_12CTD; 64PE393_14CTD; 64PE393_15CTD; 64PE393_16CTD; 64PE393_17CTD; 64PE393_18CTD; 64PE393_1CTD; 64PE393_20CTD; 64PE393_21CTD; 64PE393_22CTD; 64PE393_23CTD; 64PE393_2CTD; 64PE393_3CTD; 64PE393_4CTD; 64PE393_5CTD; 64PE393_6CTD; 64PE393_7CTD; 64PE393_8CTD; 64PE393_9CTD; Bacillariophyceae; Chlorophyceae; Chrysophyceae; Cryptophyceae; CTD/Rosette; CTD-RO; DATE/TIME; DEPTH, water; Dinophyceae; Event label; HCC; Latitude of event; Longitude of event; Method comment; NIOZ_UU; NIOZ Royal Netherlands Institute for Sea Research, and Utrecht University; Pelagia; Prasinophyceae; Prochlorococcus; Prymnesiophyceae; Synechococcus; Tropical North Atlantic
    Type: Dataset
    Format: text/tab-separated-values, 590 data points
    Location Call Number Limitation Availability
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  • 6
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    PANGAEA
    In:  Supplement to: Hornick, Thomas; Bach, Lennart Thomas; Crawfurd, Katharine J; Spilling, Kristian; Achterberg, Eric Pieter; Woodhouse, Jason N; Schulz, Kai Georg; Brussaard, Corina P D; Riebesell, Ulf; Grossart, Hans-Peter (2017): Ocean acidification impacts bacteria–phytoplankton coupling at low-nutrient conditions. Biogeosciences, 14(1), 1-15, https://doi.org/10.5194/bg-14-1-2017
    Publication Date: 2024-03-06
    Description: The oceans absorb about a quarter of the annually produced anthropogenic atmospheric carbon dioxide (CO2), resulting in a decrease in surface water pH, a process termed ocean acidification (OA). Surprisingly little is known about how OA affects the physiology of heterotrophic bacteria or the coupling of heterotrophic bacteria to phytoplankton when nutrients are limited. Previous experiments were, for the most part, undertaken during productive phases or following nutrient additions designed to stimulate algal blooms. Therefore, we performed an in situ large-volume mesocosm (ca. 55 m**3) experiment in the Baltic Sea by simulating different fugacities of CO2 (fCO2) extending from present to future conditions. The study was conducted in July?August after the nominal spring bloom, in order to maintain low-nutrient conditions throughout the experiment. This resulted in phytoplankton communities dominated by small-sized functional groups (picophytoplankton). There was no consistent fCO2-induced effect on bacterial protein production (BPP), cell-specific BPP (csBPP) or biovolumes (BVs) of either free-living (FL) or particle-associated (PA) heterotrophic bacteria, when considered as individual components (univariate analyses). Permutational Multivariate Analysis of Variance (PERMANOVA) revealed a significant effect of the fCO2 treatment on entire assemblages of dissolved and particulate nutrients, metabolic parameters and the bacteria?phytoplankton community. However, distance-based linear modelling only identified fCO2 as a factor explaining the variability observed amongst the microbial community composition, but not for explaining variability within the metabolic parameters. This suggests that fCO2 impacts on microbial metabolic parameters occurred indirectly through varying physicochemical parameters and microbial species composition. Cluster analyses examining the co-occurrence of different functional groups of bacteria and phytoplankton further revealed a separation of the four fCO2-treated mesocosms from both control mesocosms, indicating that complex trophic interactions might be altered in a future acidified ocean. Possible consequences for nutrient cycling and carbon export are still largely unknown, in particular in a nutrient-limited ocean.
    Keywords: BIOACID; Biological Impacts of Ocean Acidification; DATE/TIME; Day of experiment; KOSMOS_2012_Tvaerminne; MESO; Mesocosm experiment; Mesocosm label; Prokaryotes, heterotroph, particle associated; Protein production, free-living bacteria; Protein production, particle associated bacteria; SOPRAN; Surface Ocean Processes in the Anthropocene
    Type: Dataset
    Format: text/tab-separated-values, 568 data points
    Location Call Number Limitation Availability
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  • 7
    Publication Date: 2024-03-15
    Keywords: Alkalinity, total; Aragonite saturation state; Baltic Sea; Behaviour; Bicarbonate ion; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coast and continental shelf; Community composition and diversity; Day of experiment; DEPTH, water, experiment; Entire community; Field experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Grazing rate; Grazing rate, standard deviation; Group; Growth/Morphology; KOSMOS_2012_Tvaerminne; MESO; Mesocosm experiment; Mesocosm label; Mesocosm or benthocosm; Mortality; Mortality/Survival; Nanoeukaryotes; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Phytoplankton growth rate; Picoeukaryotes; Prokaryotes; Salinity; Synechococcus spp.; Temperate; Temperature, water; Type; Viral abundance; Viral lysis, phytoplankton loss; Viral lysis, prokaryotes loss
    Type: Dataset
    Format: text/tab-separated-values, 14456 data points
    Location Call Number Limitation Availability
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  • 8
    Publication Date: 2024-03-15
    Keywords: Alkalinity, total; Aragonite saturation state; Baltic Sea; Bicarbonate ion; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chloroiodomethane; Coast and continental shelf; DATE/TIME; Day of experiment; Dibromochloromethane; Dibromomethane; Diiodomethane; Dimethyl sulfide, dissolved; Dissolved silica, colorimetric (Mullin & Riley, 1955); Entire community; Field experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Iodoethane; Iodomethane; KOSMOS_2012_Tvaerminne; MESO; Mesocosm experiment; Mesocosm label; Mesocosm or benthocosm; OA-ICC; Ocean Acidification International Coordination Centre; Other metabolic rates; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Phosphorus, inorganic, dissolved; Salinity; Silicate; SOPRAN; Surface Ocean Processes in the Anthropocene; Temperate; Temperature, water; Treatment; Tribromomethane; Type
    Type: Dataset
    Format: text/tab-separated-values, 4098 data points
    Location Call Number Limitation Availability
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  • 9
    Publication Date: 2024-03-15
    Keywords: Alkalinity, total; Aragonite saturation state; Baltic Sea; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Coast and continental shelf; DATE/TIME; Day of experiment; Entire community; Field experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); KOSMOS_2012_Tvaerminne; MESO; Mesocosm experiment; Mesocosm label; Mesocosm or benthocosm; OA-ICC; Ocean Acidification International Coordination Centre; Other metabolic rates; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Prokaryotes, heterotroph, particle associated; Protein production, free-living bacteria; Protein production, particle associated bacteria; Salinity; SOPRAN; Surface Ocean Processes in the Anthropocene; Temperate; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 2122 data points
    Location Call Number Limitation Availability
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  • 10
    Publication Date: 2020-02-06
    Description: Ocean acidification resulting from the uptake of anthropogenic carbon dioxide (CO2) by the ocean is considered a major threat to marine ecosystems. Here we examined the effects of ocean acidification on microbial community dynamics in the eastern Baltic Sea during the summer of 2012 when inorganic nitrogen and phosphorus were strongly depleted. Large-volume in situ mesocosms were employed to mimic present, future and far future CO2 scenarios. All six groups of phytoplankton enumerated by flow cytometry ( 〈  20 µm cell diameter) showed distinct trends in net growth and abundance with CO2 enrichment. The picoeukaryotic phytoplankton groups Pico-I and Pico-II displayed enhanced abundances, whilst Pico-III, Synechococcus and the nanoeukaryotic phytoplankton groups were negatively affected by elevated fugacity of CO2 (fCO2). Specifically, the numerically dominant eukaryote, Pico-I, demonstrated increases in gross growth rate with increasing fCO2 sufficient to double its abundance. The dynamics of the prokaryote community closely followed trends in total algal biomass despite differential effects of fCO2 on algal groups. Similarly, viral abundances corresponded to prokaryotic host population dynamics. Viral lysis and grazing were both important in controlling microbial abundances. Overall our results point to a shift, with increasing fCO2, towards a more regenerative system with production dominated by small picoeukaryotic phytoplankton.
    Type: Article , PeerReviewed
    Format: text
    Format: text
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