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  • 1
    Electronic Resource
    Electronic Resource
    [s.l.] : Nature Publishing Group
    Nature biotechnology 21 (2003), S. 618-624 
    ISSN: 1546-1696
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: [Auszug] The three decades since the first breakthroughs in biotechnology and the subsequent passage of the Bayh-Dole Act have seen an enormous rise in the direct participation of universities and academic scientists in the development of novel medicines, diagnostics and discovery techniques. Over this same ...
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    [s.l.] : Nature Publishing Group
    Nature biotechnology 24 (2006), S. 509-515 
    ISSN: 1546-1696
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: [Auszug] Since the invention of recombinant DNA techniques, monoclonal antibodies and beyond, biotech companies have relied upon academic discoveries as the foundation of their technology value. University-biotech licensing agreements have become more complex over time, but typically include one or more of ...
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    [s.l.] : Nature Publishing Group
    Nature biotechnology 22 (2004), S. 271-277 
    ISSN: 1546-1696
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: [Auszug] Biotech firms attempting to make the transition from early-stage R&D to fully integrated companies with robust pipelines face a daunting financial challenge. Given that the extraordinary costs and time required to bring not one but a series of successful compounds to market cannot be sustained ...
    Type of Medium: Electronic Resource
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  • 4
    ISSN: 1572-9788
    Keywords: disease resistance ; glucose oxidase ; Gossypium hirsutum ; Nicotiana tabacum ; Talaromyces flavus ; transgenic plant
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Glucose oxidase secreted by the fungus Talaromyces flavus generates, in the presence of glucose, hydrogen peroxide that is toxic to phytopathogenic fungi responsible for economically important diseases in many crops. A glucose oxidase gene from T. flavus, was modified with a carrot extensin signal peptide and fused to either a constitutive or root-specific plant promoter. T1 tobacco plants expressing the enzyme constitutively were protected against infection by the seedling pathogen Rhizoctonia solani. Constitutive expression in tobacco was associated with reduced root growth, and slow germination on culture medium, and with reduced seed set in glasshouse conditions. Several independent transformed cotton plants with a root-specific construct expressed high glucose oxidase activity in the roots, excluding the root tip. Selected T3 homozygous lines showed some protection against the root pathogen, Verticillium dahliae, but not against Fusarium oxysporum. High levels of glucose oxidase expression in cotton roots were associated with reduced height, seed set and seedling germination and reduced lateral root formation. If this gene is to be of value for crop protection against pathogens it will require precise control of its expression to remove the deleterious phenotypes.
    Type of Medium: Electronic Resource
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  • 5
    ISSN: 1617-4623
    Keywords: Acremonium sp. ; Transformation ; Chromosomal karyotype ; Surrogate grass transformation ; uidA andhph genes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Conditions have been developed for transforming protoplasts of the perennial ryegrass endophyteAcremonium strain 187BB. Unlike most other ryegrass endophytes, this strain does not produce the lolitrem B neurotoxin and is therefore suitable as a host for surrogate introduction of foreign genes into grasses. Transformation frequencies of 700–800 transformants/μg DNA were obtained for both linear and circular forms of pAN7-1, a hygromycin (hph) resistant plasmid. Up to 80% of the linear transformants were stable on further culturing but only 25% of the circular transformants retained hygromycin resistance. Integration of pAN7-1 into the genome was confirmed by Southern blotting and probing of genomic digests of transformant DNA. Both single and tandemly repeated copies of the plasmid were found in the genome and both the number and sites of integration varied among the transformants. At least 13 chromosomes were identified in 187BB using contour-clamped homogeneous electric field (CHEF) gel electrophoresis. Probing of Southern blots of these gels confirmed that pAN7-1 had integrated into different chromosomes. The β-glucuronidase (GUS) gene,uidA, was also introduced into 187BB by co-transformation of pNOM-2 with pAN7-1. GUS activity was detected by growing the transformants on plates containing 5-bromo-4-chloro-3-indolyl β-D-glucuronic acid and by enzyme assays of mycelial extracts. Severalhph- anduidA-containing transformants were reintroduced into ryegrass seedlings and expression of GUS visualized in vivo, demonstrating that 187BB can be used as a surrogate host to introduce foreign genes into perennial ryegrass. Molecular analysis of fungal isolates from the leaf sheath confirmed that the pattern of pAN7-1 and pNOM-2 hybridizing fragments was identical to that observed in the fungus used as inoculum.
    Type of Medium: Electronic Resource
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  • 6
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    Unknown
    PANGAEA
    In:  Supplement to: Gori, Andrea; Ferrier-Pagès, Christine; Hennige, Sebastian J; Murray, Fiona; Rottier, Céline; Wicks, L C; Roberts, J Murray (2016): Physiological response of the cold-water coral Desmophyllum dianthus to thermal stress and ocean acidification. PeerJ, 4, e1606, https://doi.org/10.7717/peerj.1606
    Publication Date: 2024-03-15
    Description: Rising temperatures and ocean acidification driven by anthropogenic carbon emissions threaten both tropical and temperate corals. However, the synergistic effect of these stressors on coral physiology is still poorly understood, in particular for cold-water corals. This study assessed changes in key physiological parameters (calcification, respiration and ammonium excretion) of the widespread cold-water coral Desmophyllum dianthus maintained for 8 months at two temperatures (ambient 12 °C and elevated 15 °C) and two pCO2 conditions (ambient 390 ppm and elevated 750 ppm). At ambient temperatures no change in instantaneous calcification, respiration or ammonium excretion rates was observed at either pCO2 levels. Conversely, elevated temperature (15 °C) significantly reduced calcification rates, and combined elevated temperature and pCO2 significantly reduced respiration rates. Changes in the ratio of respired oxygen to excreted nitrogen (O:N), which provides information on the main sources of energy being metabolized, indicated a shift from mixed use of protein and carbohydrate/lipid as metabolic substrates under control conditions, to less efficient protein-dominated catabolism under both stressors. Overall, this study shows that the physiology of D. dianthus is more sensitive to thermal than pCO2 stress, and that the predicted combination of rising temperatures and ocean acidification in the coming decades may severely impact this cold-water coral species.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Ammonium, excretion; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Benthic animals; Benthos; Bicarbonate ion; Calcification/Dissolution; Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2calc; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Containers and aquaria (20-1000 L or 〈 1 m**2); Deep-sea; Desmophyllum dianthus; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Laboratory experiment; Mediterranean Sea; Net calcification rate of calcium carbonate; OA-ICC; Ocean Acidification International Coordination Centre; Other metabolic rates; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Potentiometric; Potentiometric titration; Registration number of species; Replicate; Respiration; Respiration rate, carbon; Salinity; Salinity, standard deviation; Single species; Species; Temperate; Temperature; Temperature, water; Temperature, water, standard deviation; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 432 data points
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  • 7
    Publication Date: 2018-09-28
    Description: Maritime industries routinely collect critical environmental data needed for sustainable management of marine ecosystems, supporting both the blue economy and future growth. Collating this information would provide a valuable resource for all stakeholders. For the North Sea, the oil and gas industry has been a dominant presence for over 50 years that has contributed to a wealth of knowledge about the environment. As the industry begins to decommission its offshore structures, this information will be critical for avoiding duplication of effort in data collection and ensuring best environmental management of offshore activities. This paper summarises the outcomes of a Blue Growth Data Challenge Workshop held in 2017 with participants from: the oil and gas industry; the key UK regulatory and management bodies for oil and gas decommissioning; open access data facilitators; and academic and research institutes. Here, environmental data collection and archiving by oil and gas operators in the North Sea are described, alongside how this compares to other offshore industries; what the barriers and opportunities surrounding environmental data sharing are; and how wider data sharing from offshore industries could be achieved. Five primary barriers to data sharing were identified: 1) Incentives, 2) Risk Perception, 3) Working Cultures, 4) Financial Models, and 5) Data Ownership. Active and transparent communication and collaboration between stakeholders including industry, regulatory bodies, data portals and academic institutions will be key to unlocking the data that will be critical to informing responsible decommissioning decisions for offshore oil and gas structures in the North Sea.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
    Format: application/pdf
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  • 8
    Publication Date: 2019-10-23
    Description: Knowledge on basic biological functions of organisms is essential to understand not only the role they play in the ecosystems but also to manage and protect their populations. The study of biological processes, such as growth, reproduction and physiology, which can be approached in situ or by collecting specimens and rearing them in aquaria, is particularly challenging for deep-sea organisms like cold-water corals. Field experimental work and monitoring of deep-sea populations is still a chimera. Only a handful of research institutes or companies has been able to install in situ marine observatories in the Mediterranean Sea or elsewhere, which facilitate a continuous monitoring of deep-sea ecosystems. Hence, today’s best way to obtain basic biological information on these organisms is (1) working with collected samples and analysing them post-mortem and / or (2) cultivating corals in aquaria in order to monitor biological processes and investigate coral behaviour and physiological responses under different experimental treatments. The first challenging aspect is the collection process, which implies the use of oceanographic research vessels in most occasions since these organisms inhabit areas between ca. 150 m to more than 1000 m depth, and specific sampling gears. The next challenge is the maintenance of the animals on board (in situations where cruises may take weeks) and their transport to home laboratories. Maintenance in the home laboratories is also extremely challenging since special conditions and set-ups are needed to conduct experimental studies to obtain information on the biological processes of these animals. The complexity of the natural environment from which the corals were collected cannot be exactly replicated within the laboratory setting; a fact which has led some researchers to question the validity of work and conclusions drawn from such undertakings. It is evident that aquaria experiments cannot perfectly reflect the real environmental and trophic conditions where these organisms occur, but: (1) in most cases we do not have the possibility to obtain equivalent in situ information and (2) even with limitations, they produce relevant information about the biological limits of the species, which is especially valuable when considering potential future climate change scenarios. This chapter includes many contributions from different authors and is envisioned as both to be a practical “handbook” for conducting cold-water coral aquaria work, whilst at the same time offering an overview on the cold-water coral research conducted in Mediterranean laboratories equipped with aquaria infrastructure. Experiences from Atlantic and Pacific laboratories with extensive experience with cold-water coral work have also contributed to this chapter, as their procedures are valuable to any researcher interested in conducting experimental work with cold-water corals in aquaria. It was impossible to include contributions from all laboratories in the world currently working experimentally with cold-water corals in the laboratory, but at the conclusion of the chapter we attempt, to our best of our knowledge, to supply a list of several laboratories with operational cold-water coral aquaria facilities.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , peerRev
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  • 9
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    Springer International Publishing
    In:  In: The Cnidaria, Past, Present and Future. , ed. by Goffredo, S. and Dubinsky, Z. Springer International Publishing, Cham, pp. 593-606.
    Publication Date: 2018-03-07
    Description: Cold-water corals create highly complex biogenic habitats that promote and sustain high biological diversity in the deep sea and play critical roles in deep-water ecosystem functioning across the globe. However, these often out of sight and out of mind ecosystems are increasingly under pressure both from human activities in the deep sea such as fishing and mineral extraction, and from a rapidly changing climate. This chapter gives an overview of the importance of cold-water coral habitats, the threats they face and how recent advances in understanding of both past and present cold-water coral ecosystems helps us to understand how well they may be able to adapt to current and future climate change. We address key knowledge gaps and the ongoing efforts at national and international scales to promote and protect these important yet vulnerable ecosystems.
    Type: Book chapter , NonPeerReviewed
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  • 10
    Publication Date: 2018-08-02
    Description: The ability of disseminated cancer cells to evade the immune response is a critical step for efficient metastatic progression. Protection against an immune attack is often provided by the tumor microenvironment that suppresses and excludes cytotoxic CD8+ T cells. Pancreatic ductal adenocarcinoma (PDAC) is a highly aggressive metastatic disease with unmet needs, yet the immunoprotective role of the metastatic tumor microenvironment in pancreatic cancer is not completely understood. In this study, we find that macrophage-derived granulin contributes to cytotoxic CD8+ T-cell exclusion in metastatic livers. Granulin expression by macrophages was induced in response to colony-stimulating factor 1. Genetic depletion of granulin reduced the formation of a fibrotic stroma, thereby allowing T-cell entry at the metastatic site. Although metastatic PDAC tumors are largely resistant to anti–PD-1 therapy, blockade of PD-1 in granulin-depleted tumors restored the antitumor immune defense and dramatically decreased metastatic tumor burden. These findings suggest that targeting granulin may serve as a potential therapeutic strategy to restore CD8+ T-cell infiltration in metastatic PDAC, thereby converting PDAC metastatic tumors, which are refractory to immune checkpoint inhibitors, into tumors that respond to immune checkpoint inhibition therapies.Significance: These findings uncover a mechanism by which metastatic PDAC tumors evade the immune response and provide the rationale for targeting granulin in combination with immune checkpoint inhibitors for the treatment of metastatic PDAC.Graphical Abstract: http://cancerres.aacrjournals.org/content/canres/78/15/4253/F1.large.jpg. Cancer Res; 78(15); 4253–69. ©2018 AACR.
    Print ISSN: 0008-5472
    Electronic ISSN: 1538-7445
    Topics: Medicine
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