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  • 1
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] Marine fixation of atmospheric nitrogen is believed to be an important source of biologically useful nitrogen to ocean surface waters, stimulating productivity of phytoplankton and so influencing the global carbon cycle. The majority of nitrogen fixation in tropical waters is carried out by the ...
    Type of Medium: Electronic Resource
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  • 2
    Publication Date: 2021-02-08
    Description: In vivo confocal Raman microscopy (CRM), polarized light microscopy and Fourier transform infrared spectroscopy (FTIR) were used to determine if a significant amount of amorphous calcium carbonate (ACC) exists within larval shells of Baltic mytilid mussels (Mytilus edulis-like) and whether the amount of ACC varies during larval development. No evidence for ACC was found from the onset of shell deposition at 21 h post-fertilization (hpf) until 48 hpf. Larval Mytilus shells were crystalline from 21 hpf onwards and exhibited CRM and FTIR peaks characteristic of aragonite. Prior to shell deposition at 21 hpf, no evidence for carbonates was observed through in vivo CRM.We further analysed the composition of larval shells in three other bivalve species, Mercenaria mercenaria, Crassostrea gigas and Crassostrea virginica and observed no evidence for ACC, which is in contrast to previous work on the same species. Our findings indicate that larval bivalve shells are composed of crystalline aragonite and we demonstrate that conflicting results are related to sub-optimal measurements and misinterpretation of CRM spectra. Our results demonstrate that the common perception that ACC generally occurs as a stable and abundant precursor during larval bivalve calcification needs to be critically reviewed.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
    Format: text
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  • 3
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    In:  Supplement to: Ramesh, Kirti; Melzner, Frank; Griffith, Andrew W; Gobler, Christopher J; Rouger, Caroline; Tasdemir, Deniz; Nehrke, Gernot (2018): In vivo characterization of bivalve larval shells: a confocal Raman microscopy study. Journal of The Royal Society Interface, 15(141), 20170723, https://doi.org/10.1098/rsif.2017.0723
    Publication Date: 2023-06-24
    Description: In vivo confocal Raman microscopy (CRM), polarized light microscopy and Fourier transform infrared spectroscopy (FTIR) were used to determine if a significant amount of amorphous calcium carbonate (ACC) exists within larval shells of Baltic mytilid mussels (Mytilus edulis-like) and whether the amount of ACC varies during larval development. No evidence for ACC was found from the onset of shell deposition at 21 h post-fertilization (hpf) until 48 hpf. Larval Mytilus shells were crystalline from 21 hpf onwards and exhibited CRM and FTIR peaks characteristic of aragonite. Prior to shell deposition at 21 hpf, no evidence for carbonates was observed through in vivo CRM. We further analysed the composition of larval shells in three other bivalve species, Mercenaria mercenaria, Crassostrea gigas and Crassostrea virginica and observed no evidence for ACC, which is in contrast to previous work on the same species. Our findings indicate that larval bivalve shells are composed of crystalline aragonite and we demonstrate that conflicting results are related to sub-optimal measurements and misinterpretation of CRM spectra. Our results demonstrate that the common perception that ACC generally occurs as a stable and abundant precursor during larval bivalve calcification needs to be critically reviewed.
    Keywords: Analytical method; Sample code/label; Species; Transmission of light; Wave number
    Type: Dataset
    Format: text/tab-separated-values, 143020 data points
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  • 4
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    In:  Supplement to: Hattenrath-Lehmann, Theresa K; Smith, Juliette L; Wallace, Ryan B; Merlo, Lucas R; Koch, Florian; Mittelsdorf, Heidi; Goleski, Jennifer A; Anderson, Donald M; Gobler, Christopher J (2015): The effects of elevated CO2 on the growth and toxicity of field populations and cultures of the saxitoxin-producing dinoflagellate, Alexandrium fundyense. Limnology and Oceanography, 60(1), 198-214, https://doi.org/10.1002/lno.10012
    Publication Date: 2024-03-15
    Description: The effects of coastal acidification on the growth and toxicity of the saxitoxin-producing dinoflagellate Alexandrium fundyense were examined in culture and ecosystem studies. In culture experiments, Alexandrium strains isolated from Northport Bay, New York, and the Bay of Fundy, Canada, grew significantly faster (16-190%; p 〈 0.05) when exposed to elevated levels of PCO2 ( 90-190 Pa=900-1900 µatm) compared to lower levels ( 40 Pa=400 µatm). Exposure to higher levels of PCO2 also resulted in significant increases (71-81%) in total cellular toxicity (fg saxitoxin equivalents/cell) in the Northport Bay strain, while no changes in toxicity were detected in the Bay of Fundy strain. The positive relationship between PCO2 enrichment and elevated growth was reproducible in natural populations from New York waters. Alexandrium densities were significantly and consistently enhanced when natural populations were incubated at 150 Pa PCO2 compared to 39 Pa. During natural Alexandrium blooms in Northport Bay, PCO2 concentrations increased over the course of a bloom to more than 170 Pa and were highest in regions with the greatest Alexandrium abundances, suggesting Alexandrium may further exacerbate acidification and/or be especially adapted to these acidi-fied conditions. The co-occurrence of Alexandrium blooms and elevated PCO2 represents a previously unrecognized, compounding environmental threat to coastal ecosystems. The ability of elevated PCO2 to enhance the growth and toxicity of Alexandrium indicates that acidification promoted by eutrophication or climate change can intensify these, and perhaps other, harmful algal blooms.
    Keywords: Alexandrium fundyense; Alkalinity, total; Alkalinity, total, standard deviation; Aragonite saturation state; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cell density; Chromista; Coulometric titration; Date; Event label; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Immunology/Self-protection; Incubation duration; Infrared spectrometric; Laboratory experiment; Laboratory strains; Myzozoa; North Atlantic; Northport_Harbor; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Phosphate; Phytoplankton; Potentiometric; Salinity; Silicate; Single species; Species; Strain; Temperature, water; Toxicity, cellular; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 2149 data points
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  • 5
    Publication Date: 2024-03-15
    Keywords: Alkalinity, total; Allele; Animalia; Aragonite saturation state; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Brackish waters; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chordata; Coulometric titration; Date; DATE/TIME; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gene expression (incl. proteomics); Group; Identification; Laboratory experiment; LATITUDE; Locus; Long_Island; LONGITUDE; Menidia menidia; Mortality/Survival; Nekton; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Potentiometric; Replicate; Salinity; Sample ID; Single species; Species; Status; Temperate; Temperature, water; Time in days
    Type: Dataset
    Format: text/tab-separated-values, 202769 data points
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  • 6
    Publication Date: 2024-03-15
    Description: While ocean acidification has different effects on herbivores and autotrophs, how acidification may influence herbivory is poorly understood. This study examined how grazing by the gastropod Lacuna vincta (hereafter Lacuna) on the macroalgae Ulva spp. (hereafter Ulva) is influenced by ocean acidification. Herbivory by Lacuna was significantly reduced under elevated partial pressure of carbon dioxide ( pCO2; 1500-2000 µatm) relative to ambient pCO2 (400 µatm). This significant decrease in herbivory was unrelated to the physiological status of Ulva but rather was specifically elicited when Lacuna was exposed to elevated pCO2 in the absence of food for 18 to 24 h prior to grazing Ulva. The negative effects of elevated pCO2 on Lacuna were absent at 400 to 800 µatm pCO2 or when fed but persisted for up to 72 h following a 24 h exposure to elevated pCO2 without food. Depressed respiration rates in Lacuna following exposure to high pCO2 without food indicated these conditions produced metabolic suppression potentially associated with acidosis. Collectively, the lasting (72 h) nature of grazing inhibition of Lacuna following brief exposure (18 h) to moderate pCO2 levels (〉1500 µatm) when food was not available suggests this process could have broad effects on the dynamics of macroalgae in estuaries where Lacuna is a dominant grazer; these effects will be amplified as climate change progresses.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Behaviour; Benthic animals; Benthos; Bicarbonate ion; Bicarbonate ion, standard deviation; Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Calculated using seacarb after Orr et al. (2018); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Fugacity of carbon dioxide in seawater, standard deviation; Herbivory rate per grazer; Herbivory rate per grazer, standard deviation; Identification; Laboratory experiment; Lacuna vincta; Mollusca; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Other; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Registration number of species; Respiration; Respiration rate, oxygen; Respiration rate, oxygen, standard deviation; Salinity; Salinity, standard deviation; Shinnecock_Bay; Single species; Species; Temperate; Temperature, water; Temperature, water, standard deviation; Treatment; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 1612 data points
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  • 7
    Publication Date: 2024-03-15
    Description: Estuaries serve as important nursery habitats for various species of early-life stage fish, but can experience cooccurring acidification and hypoxia that can vary diurnally in intensity. This study examines the effects of acidification (pH 7.2–7.4) and hypoxia (dissolved oxygen (DO) ~ 2–4 mg/L) as individual and combined stressors on four fitness metrics for three species of forage fish endemic to the U.S. East Coast: Menidia menidia, Menidia beryllina, and Cyprinodon variegatus. Additionally, the impacts of various durations of exposure to these two stressors was also assessed to explore the sensitivity threshold for larval fishes under environmentally-representative conditions. C. variegatus was resistant to chronic low pH, while M. menidia and M. beryllina experienced significantly reduced survival and hatch time, respectively. Exposure to hypoxia resulted in reduced hatch success of both Menidia species, as well as diminished survival of M. beryllina larvae. Diurnal exposure to low pH and low DO for 4 or 8 h did not alter survival of M. beryllina, although 8 or 12 h of daily exposure through the 10 days posthatch significantly depressed larval size. In contrast, M. menidia experienced significant declines in survival for all intervals of diel cycling hypoxia and acidification (4–12 h). Exposure to 12-h diurnal hypoxia generally elicited negative effects equal to, or of greater severity, than chronic exposure to low DO at the same levels despite significantly higher mean DO exposure concentrations. This evidences a substantial biological cost to adapting to changing DO levels, and implicates diurnal cycling of DO as a significant threat to fish larvae in estuaries. Larval responses to hypoxia, and to a lesser extent acidification, in this study on both continuous and diurnal timescales indicate that estuarine conditions throughout the spawning and postspawn periods could adversely affect stocks of these fish, with diverse implications for the remainder of the food web.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Bicarbonate ion; Bicarbonate ion, standard deviation; Brackish waters; Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Calculated using seacarb after Orr et al. (2018); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Chordata; Containers and aquaria (20-1000 L or 〈 1 m**2); Cyprinodon variegatus; Egg hatching success; Egg hatching success, standard error; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Fugacity of carbon dioxide in seawater, standard deviation; Growth/Morphology; Hatching time; Hatching time, standard error; Laboratory experiment; Length; Length, standard error; Menidia beryllina; Menidia menidia; Mortality/Survival; Nekton; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Other; Oxygen; Oxygen, dissolved; Oxygen, dissolved, standard deviation; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Potentiometric; Registration number of species; Reproduction; Salinity; Salinity, standard deviation; Single species; Species; Survival; Survival rate, standard error; Temperate; Temperature, water; Temperature, water, standard deviation; Treatment; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 1676 data points
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  • 8
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    In:  Supplement to: Talmage, Stephanie C; Gobler, Christopher J (2010): Effects of past, present, and future ocean carbon dioxide concentrations on the growth and survival of larval shellfish. Proceedings of the National Academy of Sciences of the United States of America, 107(40), 17246-17251, https://doi.org/10.1073/pnas.0913804107
    Publication Date: 2024-03-15
    Description: The combustion of fossil fuels has enriched levels of CO2 in the world's oceans and decreased ocean pH. Although the continuation of these processes may alter the growth, survival, and diversity of marine organisms that synthesize CaCO3shells, the effects of ocean acidification since the dawn of the industrial revolution are not clear. Here we present experiments that examined the effects of the ocean's past, present, and future (21st and 22nd centuries) CO2concentrations on the growth, survival, and condition of larvae of two species of commercially and ecologically valuable bivalve shellfish (Mercenaria mercenariaand Argopecten irradians). Larvae grown under near preindustrial CO2concentrations (250 ppm) displayed significantly faster growth and metamorphosis as well as higher survival and lipid accumulation rates compared with individuals reared under modern day CO2 levels. Bivalves grown under near preindustrial CO2 levels displayed thicker, more robust shells than individuals grown at present CO2 concentrations, whereas bivalves exposed to CO2 levels expected later this century had shells that were malformed and eroded. These results suggest that the ocean acidification that has occurred during the past two centuries may be inhibiting the development and survival of larval shellfish and contributing to global declines of some bivalve populations.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Argopecten irradians; Argopecten irradians, diameter; Argopecten irradians, diameter, standard deviation; Argopecten irradians, lipid index; Argopecten irradians, lipid index, standard deviation; Argopecten irradians, metamorphosed; Argopecten irradians, pediveliger; Argopecten irradians, thickness; Argopecten irradians, thickness, standard deviation; Argopecten irradians, veliger; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, partial pressure, standard deviation; Coast and continental shelf; Development; EGM-4 Environmental Gas Analyzer (PP Systems); EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Experiment day; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Laboratory experiment; Mercenaria mercenaria; Mercenaria mercenaria, lipid index; Mercenaria mercenaria, lipid index, standard deviation; Mercenaria mercenaria, metamorphosed; Mercenaria mercenaria, pediveliger; Mercenaria mercenaria, shell size; Mercenaria mercenaria, shell size, standard deviation; Mercenaria mercenaria, thickness; Mercenaria mercenaria, thickness, standard deviation; Mercenaria mercenaria, veliger; Mollusca; Mortality/Survival; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Salinity; Salinity, standard deviation; see reference(s); Single species; Species; Temperature, standard deviation; Temperature, water; Tropical; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 2628 data points
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  • 9
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    In:  Supplement to: Murray, Christopher S; Malvezzi, Alex; Gobler, Christopher J; Baumann, Hannes (2014): Offspring sensitivity to ocean acidification changes seasonally in a coastal marine fish. Marine Ecology Progress Series, 504, 1-11, https://doi.org/10.3354/meps10791
    Publication Date: 2024-03-15
    Description: Experimental assessments of species vulnerabilities to ocean acidification are rapidly increasing in number, yet the potential for short- and long-term adaptation to high CO2 by contemporary marine organisms remains poorly understood. We used a novel experimental approach that combined bi-weekly sampling of a wild, spawning fish population (Atlantic silverside Menidia menidia) with standardized offspring CO2 exposure experiments and parallel pH monitoring of a coastal ecosystem. We assessed whether offspring produced at different times of the spawning season (April to July) would be similarly susceptible to elevated (1100 µatm, pHNIST = 7.77) and high CO2 levels (2300 µatm, pHNIST = 7.47). Early in the season (April), high CO2 levels significantly (p 〈 0.05) reduced fish survival by 54% (2012) and 33% (2013) and reduced 1 to 10 d post-hatch growth by 17% relative to ambient conditions. However, offspring from parents collected later in the season became increasingly CO2-tolerant until, by mid-May, offspring survival was equally high at all CO2 levels. This interannually consistent plasticity coincided with the rapid annual pH decline in the species' spawning habitat (mean pH: 1 April/31 May = 8.05/7.67). It suggests that parents can condition their offspring to seasonally acidifying environments, either via changes in maternal provisioning and/or epigenetic transgenerational plasticity (TGP). TGP to increasing CO2 has been shown in the laboratory but never before in a wild population. Our novel findings of direct CO2-related survival reductions in wild fish offspring and seasonally plastic responses imply that realistic assessments of species CO2-sensitivities must control for parental environments that are seasonally variable in coastal habitats.
    Keywords: Alkalinity, total; Animalia; Aragonite saturation state; Bicarbonate ion; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chordata; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); Coulometric titration; Date; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Growth rate, standard error; Laboratory experiment; Length, standard; Length, standard error; Menidia menidia; Mortality/Survival; Nekton; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Potentiometric; Replicates; Reproduction; Salinity; Single species; Species; Survival; Survival rate, standard error; Temperate; Temperature, water; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 952 data points
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  • 10
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    In:  Supplement to: Stevens, Alexandra M; Gobler, Christopher J (2018): Interactive effects of acidification, hypoxia, and thermal stress on growth, respiration, and survival of four North Atlantic bivalves. Marine Ecology Progress Series, 604, 143-161, https://doi.org/10.3354/meps12725
    Publication Date: 2024-03-15
    Description: We investigated the individual and interactive effects of coastal and climate change stressors (elevated temperatures, acidification, and hypoxia) on the growth, survival, and respiration rates of 4 commercially and ecologically important North Atlantic bivalves: bay scallops Argopecten irradians, Eastern oysters Crassostrea virginica, blue mussels Mytilus edulis, and hard clams Mercenaria mercenaria. Month-long experiments were performed on multiple cohorts of post-set juveniles using conditions commonly found during summer months within eutrophied, shallow, temperate, coastal environments (24-31°C; 2-7 mg O2/l; pHT, total scale, 7.2-8.0). Elevated temperatures most consistently altered the performance of the bivalves, with both positive and negative physiological consequences. Low levels of dissolved oxygen (DO) and pH individually reduced the survival, shell growth, and/or tissue weight of each bivalve, with A. irradians being the most vulnerable species. Low DO also significantly increased respiration rates of A. irradians and M. mercenaria, evidencing a compensatory physiological response to hypoxia. M. edulis and M. mercenaria both displayed size-dependent vulnerability to acidification, with smaller individuals being more susceptible. The combination of low DO and low pH often interacted antagonistically to yield growth rates higher than would be predicted from either individual stressor, potentially suggesting that some anaerobic metabolic pathways may function optimally under hypercapnia. Elevated temperature and low pH interacted both antagonistically and synergistically, producing outcomes that could not be predicted from the responses to individual stressors. Collectively, this study revealed species- and size-specific vulnerabilities of bivalves to coastal stressors along with unpredicted interactions among those stressors.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Argopecten irradians; Benthic animals; Benthos; Bicarbonate ion; Bicarbonate ion, standard deviation; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calcite saturation state, standard deviation; Calculated using seacarb after Nisumaa et al. (2010); Calculated using seacarb after Orr et al. (2018); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Coast and continental shelf; Crassostrea virginica; Dry mass; Dry mass, standard error; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Fugacity of carbon dioxide in seawater, standard deviation; Growth/Morphology; Growth rate; Growth rate, standard error; Laboratory experiment; Mercenaria mercenaria; Mollusca; Mortality/Survival; Mytilus edulis; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Oxygen; Oxygen, standard deviation; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Registration number of species; Respiration; Respiration rate, oxygen; Respiration rate, oxygen, standard error; Salinity; Salinity, standard deviation; Shell length; Single species; Species; Survival; Survival rate, standard error; Temperate; Temperature; Temperature, water; Temperature, water, standard deviation; Treatment; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 3013 data points
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