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  • 2015-2019  (13)
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  • 1
    Publication Date: 2021-02-08
    Description: In vivo confocal Raman microscopy (CRM), polarized light microscopy and Fourier transform infrared spectroscopy (FTIR) were used to determine if a significant amount of amorphous calcium carbonate (ACC) exists within larval shells of Baltic mytilid mussels (Mytilus edulis-like) and whether the amount of ACC varies during larval development. No evidence for ACC was found from the onset of shell deposition at 21 h post-fertilization (hpf) until 48 hpf. Larval Mytilus shells were crystalline from 21 hpf onwards and exhibited CRM and FTIR peaks characteristic of aragonite. Prior to shell deposition at 21 hpf, no evidence for carbonates was observed through in vivo CRM.We further analysed the composition of larval shells in three other bivalve species, Mercenaria mercenaria, Crassostrea gigas and Crassostrea virginica and observed no evidence for ACC, which is in contrast to previous work on the same species. Our findings indicate that larval bivalve shells are composed of crystalline aragonite and we demonstrate that conflicting results are related to sub-optimal measurements and misinterpretation of CRM spectra. Our results demonstrate that the common perception that ACC generally occurs as a stable and abundant precursor during larval bivalve calcification needs to be critically reviewed.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
    Format: text
    Location Call Number Limitation Availability
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  • 2
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    PANGAEA
    In:  Supplement to: Ramesh, Kirti; Melzner, Frank; Griffith, Andrew W; Gobler, Christopher J; Rouger, Caroline; Tasdemir, Deniz; Nehrke, Gernot (2018): In vivo characterization of bivalve larval shells: a confocal Raman microscopy study. Journal of The Royal Society Interface, 15(141), 20170723, https://doi.org/10.1098/rsif.2017.0723
    Publication Date: 2023-06-24
    Description: In vivo confocal Raman microscopy (CRM), polarized light microscopy and Fourier transform infrared spectroscopy (FTIR) were used to determine if a significant amount of amorphous calcium carbonate (ACC) exists within larval shells of Baltic mytilid mussels (Mytilus edulis-like) and whether the amount of ACC varies during larval development. No evidence for ACC was found from the onset of shell deposition at 21 h post-fertilization (hpf) until 48 hpf. Larval Mytilus shells were crystalline from 21 hpf onwards and exhibited CRM and FTIR peaks characteristic of aragonite. Prior to shell deposition at 21 hpf, no evidence for carbonates was observed through in vivo CRM. We further analysed the composition of larval shells in three other bivalve species, Mercenaria mercenaria, Crassostrea gigas and Crassostrea virginica and observed no evidence for ACC, which is in contrast to previous work on the same species. Our findings indicate that larval bivalve shells are composed of crystalline aragonite and we demonstrate that conflicting results are related to sub-optimal measurements and misinterpretation of CRM spectra. Our results demonstrate that the common perception that ACC generally occurs as a stable and abundant precursor during larval bivalve calcification needs to be critically reviewed.
    Keywords: Analytical method; Sample code/label; Species; Transmission of light; Wave number
    Type: Dataset
    Format: text/tab-separated-values, 143020 data points
    Location Call Number Limitation Availability
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  • 3
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    PANGAEA
    In:  Supplement to: Hattenrath-Lehmann, Theresa K; Smith, Juliette L; Wallace, Ryan B; Merlo, Lucas R; Koch, Florian; Mittelsdorf, Heidi; Goleski, Jennifer A; Anderson, Donald M; Gobler, Christopher J (2015): The effects of elevated CO2 on the growth and toxicity of field populations and cultures of the saxitoxin-producing dinoflagellate, Alexandrium fundyense. Limnology and Oceanography, 60(1), 198-214, https://doi.org/10.1002/lno.10012
    Publication Date: 2024-03-15
    Description: The effects of coastal acidification on the growth and toxicity of the saxitoxin-producing dinoflagellate Alexandrium fundyense were examined in culture and ecosystem studies. In culture experiments, Alexandrium strains isolated from Northport Bay, New York, and the Bay of Fundy, Canada, grew significantly faster (16-190%; p 〈 0.05) when exposed to elevated levels of PCO2 ( 90-190 Pa=900-1900 µatm) compared to lower levels ( 40 Pa=400 µatm). Exposure to higher levels of PCO2 also resulted in significant increases (71-81%) in total cellular toxicity (fg saxitoxin equivalents/cell) in the Northport Bay strain, while no changes in toxicity were detected in the Bay of Fundy strain. The positive relationship between PCO2 enrichment and elevated growth was reproducible in natural populations from New York waters. Alexandrium densities were significantly and consistently enhanced when natural populations were incubated at 150 Pa PCO2 compared to 39 Pa. During natural Alexandrium blooms in Northport Bay, PCO2 concentrations increased over the course of a bloom to more than 170 Pa and were highest in regions with the greatest Alexandrium abundances, suggesting Alexandrium may further exacerbate acidification and/or be especially adapted to these acidi-fied conditions. The co-occurrence of Alexandrium blooms and elevated PCO2 represents a previously unrecognized, compounding environmental threat to coastal ecosystems. The ability of elevated PCO2 to enhance the growth and toxicity of Alexandrium indicates that acidification promoted by eutrophication or climate change can intensify these, and perhaps other, harmful algal blooms.
    Keywords: Alexandrium fundyense; Alkalinity, total; Alkalinity, total, standard deviation; Aragonite saturation state; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cell density; Chromista; Coulometric titration; Date; Event label; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Immunology/Self-protection; Incubation duration; Infrared spectrometric; Laboratory experiment; Laboratory strains; Myzozoa; North Atlantic; Northport_Harbor; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Phosphate; Phytoplankton; Potentiometric; Salinity; Silicate; Single species; Species; Strain; Temperature, water; Toxicity, cellular; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 2149 data points
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  • 4
    Publication Date: 2024-03-15
    Keywords: Alkalinity, total; Allele; Animalia; Aragonite saturation state; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Brackish waters; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chordata; Coulometric titration; Date; DATE/TIME; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gene expression (incl. proteomics); Group; Identification; Laboratory experiment; LATITUDE; Locus; Long_Island; LONGITUDE; Menidia menidia; Mortality/Survival; Nekton; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Potentiometric; Replicate; Salinity; Sample ID; Single species; Species; Status; Temperate; Temperature, water; Time in days
    Type: Dataset
    Format: text/tab-separated-values, 202769 data points
    Location Call Number Limitation Availability
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  • 5
    Publication Date: 2024-03-15
    Description: While ocean acidification has different effects on herbivores and autotrophs, how acidification may influence herbivory is poorly understood. This study examined how grazing by the gastropod Lacuna vincta (hereafter Lacuna) on the macroalgae Ulva spp. (hereafter Ulva) is influenced by ocean acidification. Herbivory by Lacuna was significantly reduced under elevated partial pressure of carbon dioxide ( pCO2; 1500-2000 µatm) relative to ambient pCO2 (400 µatm). This significant decrease in herbivory was unrelated to the physiological status of Ulva but rather was specifically elicited when Lacuna was exposed to elevated pCO2 in the absence of food for 18 to 24 h prior to grazing Ulva. The negative effects of elevated pCO2 on Lacuna were absent at 400 to 800 µatm pCO2 or when fed but persisted for up to 72 h following a 24 h exposure to elevated pCO2 without food. Depressed respiration rates in Lacuna following exposure to high pCO2 without food indicated these conditions produced metabolic suppression potentially associated with acidosis. Collectively, the lasting (72 h) nature of grazing inhibition of Lacuna following brief exposure (18 h) to moderate pCO2 levels (〉1500 µatm) when food was not available suggests this process could have broad effects on the dynamics of macroalgae in estuaries where Lacuna is a dominant grazer; these effects will be amplified as climate change progresses.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Behaviour; Benthic animals; Benthos; Bicarbonate ion; Bicarbonate ion, standard deviation; Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Calculated using seacarb after Orr et al. (2018); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Fugacity of carbon dioxide in seawater, standard deviation; Herbivory rate per grazer; Herbivory rate per grazer, standard deviation; Identification; Laboratory experiment; Lacuna vincta; Mollusca; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Other; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Registration number of species; Respiration; Respiration rate, oxygen; Respiration rate, oxygen, standard deviation; Salinity; Salinity, standard deviation; Shinnecock_Bay; Single species; Species; Temperate; Temperature, water; Temperature, water, standard deviation; Treatment; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 1612 data points
    Location Call Number Limitation Availability
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  • 6
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    PANGAEA
    In:  Supplement to: Stevens, Alexandra M; Gobler, Christopher J (2018): Interactive effects of acidification, hypoxia, and thermal stress on growth, respiration, and survival of four North Atlantic bivalves. Marine Ecology Progress Series, 604, 143-161, https://doi.org/10.3354/meps12725
    Publication Date: 2024-03-15
    Description: We investigated the individual and interactive effects of coastal and climate change stressors (elevated temperatures, acidification, and hypoxia) on the growth, survival, and respiration rates of 4 commercially and ecologically important North Atlantic bivalves: bay scallops Argopecten irradians, Eastern oysters Crassostrea virginica, blue mussels Mytilus edulis, and hard clams Mercenaria mercenaria. Month-long experiments were performed on multiple cohorts of post-set juveniles using conditions commonly found during summer months within eutrophied, shallow, temperate, coastal environments (24-31°C; 2-7 mg O2/l; pHT, total scale, 7.2-8.0). Elevated temperatures most consistently altered the performance of the bivalves, with both positive and negative physiological consequences. Low levels of dissolved oxygen (DO) and pH individually reduced the survival, shell growth, and/or tissue weight of each bivalve, with A. irradians being the most vulnerable species. Low DO also significantly increased respiration rates of A. irradians and M. mercenaria, evidencing a compensatory physiological response to hypoxia. M. edulis and M. mercenaria both displayed size-dependent vulnerability to acidification, with smaller individuals being more susceptible. The combination of low DO and low pH often interacted antagonistically to yield growth rates higher than would be predicted from either individual stressor, potentially suggesting that some anaerobic metabolic pathways may function optimally under hypercapnia. Elevated temperature and low pH interacted both antagonistically and synergistically, producing outcomes that could not be predicted from the responses to individual stressors. Collectively, this study revealed species- and size-specific vulnerabilities of bivalves to coastal stressors along with unpredicted interactions among those stressors.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Argopecten irradians; Benthic animals; Benthos; Bicarbonate ion; Bicarbonate ion, standard deviation; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calcite saturation state, standard deviation; Calculated using seacarb after Nisumaa et al. (2010); Calculated using seacarb after Orr et al. (2018); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Coast and continental shelf; Crassostrea virginica; Dry mass; Dry mass, standard error; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Fugacity of carbon dioxide in seawater, standard deviation; Growth/Morphology; Growth rate; Growth rate, standard error; Laboratory experiment; Mercenaria mercenaria; Mollusca; Mortality/Survival; Mytilus edulis; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Oxygen; Oxygen, standard deviation; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Registration number of species; Respiration; Respiration rate, oxygen; Respiration rate, oxygen, standard error; Salinity; Salinity, standard deviation; Shell length; Single species; Species; Survival; Survival rate, standard error; Temperate; Temperature; Temperature, water; Temperature, water, standard deviation; Treatment; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 3013 data points
    Location Call Number Limitation Availability
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  • 7
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    PANGAEA
    In:  Supplement to: Young, Craig S; Gobler, Christopher J (2018): The ability of macroalgae to mitigate the negative effects of ocean acidification on four species of North Atlantic bivalve. Biogeosciences, 15(20), 6167-6183, https://doi.org/10.5194/bg-15-6167-2018
    Publication Date: 2024-03-15
    Description: Coastal ecosystems can experience acidification via upwelling, eutrophication, riverine discharge, and climate change. While the resulting increases in pCO2 can have deleterious effects on calcifying animals, this change in carbonate chemistry may benefit some marine autotrophs. Here, we report on experiments performed with North Atlantic populations of hard clams (Mercenaria mercenaria), eastern oysters (Crassostrea virginica), bay scallops (Argopecten irradians), and blue mussels (Mytilus edulis) grown with and without North Atlantic populations of the green macroalgae, Ulva. In six of seven experiments, exposure to elevated pCO2 levels (  1700 µatm) resulted in depressed shell- and/or tissue-based growth rates of bivalves compared to control conditions, whereas rates were significantly higher in the presence of Ulva in all experiments. In many cases, the co-exposure to elevated pCO2 levels and Ulva had an antagonistic effect on bivalve growth rates whereby the presence of Ulva under elevated pCO2 levels significantly improved their performance compared to the acidification-only treatment. Saturation states for calcium carbonate (Ω) were significantly higher in the presence of Ulva under both ambient and elevated CO2 delivery rates, and growth rates of bivalves were significantly correlated with Omega in six of seven experiments. Collectively, the results suggest that photosynthesis and/or nitrate assimilation by Ulva increased alkalinity, fostering a carbonate chemistry regime more suitable for optimal growth of calcifying bivalves. This suggests that large natural and/or aquacultured collections of macroalgae in acidified environments could serve as a refuge for calcifying animals that may otherwise be negatively impacted by elevated pCO2 levels and depressed Omega.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Argopecten irradians; Benthic animals; Benthos; Bicarbonate ion; Bicarbonate ion, standard deviation; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calcite saturation state, standard deviation; Calculated using seacarb after Nisumaa et al. (2010); Calculated using seacarb after Orr et al. (2018); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Coast and continental shelf; Crassostrea virginica; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Fugacity of carbon dioxide in seawater, standard deviation; Growth/Morphology; Growth rate; Growth rate, standard deviation; Hydroxide ion; Hydroxide ion, standard deviation; Laboratory experiment; Mercenaria mercenaria; Mollusca; Mytilus edulis; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Other; Oxygen; Oxygen, standard deviation; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Registration number of species; Salinity; Salinity, standard deviation; Shell length; Single species; Species; Temperate; Temperature, water; Temperature, water, standard deviation; Treatment; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 1484 data points
    Location Call Number Limitation Availability
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  • 8
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    PANGAEA
    In:  Supplement to: Young, Craig S; Peterson, Bradley J; Gobler, Christopher J (2018): The Bloom-Forming Macroalgae, Ulva, Outcompetes the Seagrass, Zostera marina, Under High CO2 Conditions. Estuaries and Coasts, 41(8), 2340-2355, https://doi.org/10.1007/s12237-018-0437-0
    Publication Date: 2024-03-15
    Description: This study reports on experiments performed with a Northwest Atlantic species of the macroalgae, Ulva, and the seagrass, Zostera marina, grown under ambient and elevated levels of pCO2, and subjected to competition with each other. When grown individually, elevated pCO2 significantly increased growth rates and productivity of Ulva and Zostera, respectively, beyond control treatments (by threefold and 27%, respectively). For both primary producers, significant declines in tissue δ13C signatures suggested that increased growth and productivity were associated with a shift from use of HCO3− toward CO2 use. When grown under higher pCO2, Zostera experienced significant increases in leaf and rhizome carbon content as well as significant increases in leaf carbon-to-nitrogen ratios, while sediments within which high CO2 Zostera were grown had a significantly higher organic carbon content. When grown in the presence of Ulva; however, above- and below-ground productivity and tissue nitrogen content of Zostera were significantly lower, revealing an antagonistic interaction between elevated CO2 and the presence of Ulva. The presence of Zostera had no significant effect on the growth of Ulva. Collectively, this study demonstrates that while Ulva and Zostera can each individually benefit from elevated pCO2 levels, the ability of Ulva to grow more rapidly and inhibit seagrass productivity under elevated pCO2, coupled with accumulation of organic C in sediments, may offset the potential benefits for Zostera within high CO2 environments.
    Keywords: Alkalinity, total; Ammonium; Ammonium, standard error; Aragonite saturation state; Areal productivity; Areal productivity, standard error; Benthos; Bicarbonate ion; Bicarbonate ion, standard error; Biomass/Abundance/Elemental composition; Biomass production; Biomass production, standard error; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard error; Carbon, organic, per unit sediment mass; Carbon, organic, standard error; Carbon, per dry mass; Carbon/Nitrogen ratio; Carbon/Nitrogen ratio, standard error; Carbonate ion; Carbonate system computation flag; Carbon content per dry mass, standard error; Carbon dioxide; Chlorophyta; Coast and continental shelf; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Growth rate, standard error; Laboratory experiment; Macroalgae; Nitrate; Nitrate, standard error; Nitrogen, per dry mass; Nitrogen content per dry mass, standard error; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error; pH; pH, standard error; Phosphate; Phosphate, standard error; Plantae; Primary production/Photosynthesis; Registration number of species; Salinity; Salinity, standard error; Seagrass; Shinnecock_Bay; Single species; Species; Species interaction; Temperate; Temperature, water; Temperature, water, standard error; Tracheophyta; Treatment; Type; Ulva lactuca; Uniform resource locator/link to reference; Zostera marina; δ13C; δ13C, standard error
    Type: Dataset
    Format: text/tab-separated-values, 392 data points
    Location Call Number Limitation Availability
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  • 9
    Publication Date: 2024-04-28
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Arthropoda; Bicarbonate ion; Bicarbonate ion, standard deviation; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Calculated using seacarb after Orr et al. (2018); Callinectes sapidus; Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Coast and continental shelf; Coulometric titration; Day of experiment; Experiment; Experiment duration; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Fugacity of carbon dioxide in seawater, standard deviation; Laboratory experiment; Mortality/Survival; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Oxygen; Oxygen, dissolved; Oxygen, dissolved, standard deviation; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Potentiometric; Proportion of survival; Registration number of species; Replicate; Salinity; Salinity, standard deviation; Single species; Species; Temperate; Temperature, water; Temperature, water, standard deviation; Treatment; Type; Uniform resource locator/link to reference; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 10800 data points
    Location Call Number Limitation Availability
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  • 10
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    The Royal Society Publishing
    In:  EPIC3Journal of The Royal Society Interface, The Royal Society Publishing, 15(141), pp. 20170723, ISSN: 1742-5689
    Publication Date: 2018-04-13
    Description: In vivo confocal Raman microscopy (CRM), polarized light microscopy and Fourier transform infrared spectroscopy (FTIR) were used to determine if a significant amount of amorphous calcium carbonate (ACC) exists within larval shells of Baltic mytilid mussels (Mytilus edulis-like) and whether the amount of ACC varies during larval development. No evidence for ACC was found from the onset of shell deposition at 21 h post-fertilization (hpf) until 48 hpf. Larval Mytilus shells were crystalline from 21 hpf onwards and exhibited CRM and FTIR peaks characteristic of aragonite. Prior to shell deposition at 21 hpf, no evidence for carbonates was observed through in vivo CRM.We further analysed the composition of larval shells in three other bivalve species, Mercenaria mercenaria, Crassostrea gigas and Crassostrea virginica and observed no evidence for ACC, which is in contrast to previous work on the same species. Our findings indicate that larval bivalve shells are composed of crystalline aragonite and we demonstrate that conflicting results are related to sub-optimal measurements and misinterpretation of CRM spectra. Our results demonstrate that the common perception that ACC generally occurs as a stable and abundant precursor during larval bivalve calcification needs to be critically reviewed.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
    Format: application/pdf
    Location Call Number Limitation Availability
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