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  • Journals
  • Articles  (33)
  • Open Access-Papers  (33)
  • WILEY-BLACKWELL PUBLISHING  (18)
  • Springer  (15)
  • 1
    Publication Date: 2022-07-23
    Description: This open access book presents the results of three years collaboration between earth scientists and data scientists, in developing and applying data science methods for scientific discovery. The book will be highly beneficial for other researchers at senior and graduate level, interested in applying visual data exploration, computational approaches and scientifc workflows.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Book , NonPeerReviewed
    Format: application/pdf
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  • 2
    Publication Date: 2024-04-24
    Description: Groundwater is a vital resource for humans, non-human species, and ecosystems. It has allowed the development of human evolution and civilizations throughout history (e.g., Wittfogel 1956, Tempelhoff et al. 2009, Cuthbert and Ashley 2014, Roberts 2014). However, it faces multiple potential threats that make it vulnerable and fragile. Climate change and human activities are the primary causes that have led to water cycle disruptions, particularly a decline in groundwater quality and quantity (e.g., Gleeson et al. 2020, Chaminé et al. 2022, Richardson et al. 2023). Climate variability has induced droughts, floods, and other extreme weather conditions, significantly impacting groundwater in many regions. Meanwhile, human activities such as over-abstraction, ground contamination, deforestation, land-use change, and other anthropogenic pressures have further compromised groundwater status. Nonetheless, groundwater continues to fulfill water demands in many regions or during specific periods. Therefore, concerted efforts are imperative to ensure its sustainability. So, conservation practices and nature-based solutions must be adopted to efficiently manage groundwater and shield it from additional potential hazards or risks (e.g., contamination, pollution, or over-abstraction). Failure to act quickly can result in the loss of this critical resource, with severe consequences for the economy, society, and ecosystems. From this perspective, it is imperative to prioritize actions underscored by technical-scientific integrity, environmental responsibility, societal sensitivity, and ethical practices.
    Description: Published
    Description: 97
    Description: OS: Terza missione
    Description: OSA5: Energia e georisorse
    Description: JCR Journal
    Keywords: groundwater ; resource management ; sustainability ; hydrogeoethics ; geoethics ; societal well-being ; 05.03. Educational, History of Science, Public Issues ; 03.02. Hydrology ; 04.04. Geology ; 05.09. Miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 3
    Publication Date: 2018-11-09
    Description: 1. A resampling of 38 small farmland ponds in Belgium after 10 years revealed a high temporal species turnover for both phytoplankton and zooplankton communities, associated with substantial changes in abiotic factors, especially a reduction in total phosphorus concentration. 2. Across ponds, phytoplankton biomass decreased while evenness and richness increased between the samplings in 2003 and 2013. By contrast, the zooplankton assemblage was characterised by lower biomass, richness and evenness in 2013. Ponds experiencing larger environmental change showed stronger changes in phytoplankton richness and evenness. 3. Resource use efficiency (RUE) of zooplankton increased with greater environmental change and zooplankton evenness, which points to a switch towards species with higher RUE or greater variety in food sources in higher trophic levels. 4. As ponds are important habitats for freshwater biodiversity and ecosystems services, the strong but predictable species turnover and the opposing effects of environmental change on different trophic levels need to be embedded in conservation and management plans.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 4
    Publication Date: 2019-12-19
    Description: 1. Reliable determination of organisms is a prerequisite to explore their spatial and temporal occurrence and to study their evolution, ecology, and dispersal. In Europe, Bavaria (Germany) provides an excellent study system for research on the origin and diversification of freshwater organisms including dinophytes, due to the presence of extensive lake districts and ice age river valleys. Bavarian freshwater environments are ecologically diverse and range from deep nutrient‐poor mountain lakes to shallow nutrient‐rich lakes and ponds. 2. We obtained amplicon sequence data (V4 region of small subunit‐rRNA, c. 410 bp long) from environmental samples collected at 11 sites in Upper Bavaria. We found 186 operational taxonomic units (OTUs) associated with Dinophyceae that were further classified by means of a phylogenetic placement approach. 3. The maximum likelihood tree inferred from a well‐curated reference alignment comprised a systematically representative set of 251 dinophytes, covering the currently known molecular diversity and OTUs linked to type material if possible. Environmental OTUs were scattered across the reference tree, but accumulated mostly in freshwater lineages, with 79% of OTUs placed in either Apocalathium, Ceratium, or Peridinium, the most frequently encountered taxa in Bavaria based on morphology. 4. Twenty‐one Bavarian OTUs showed identical sequences to already known and vouchered accessions, two of which are linked to type material, namely Palatinus apiculatus and Theleodinium calcisporum. Particularly within Peridiniaceae, delimitation of Peridinium species was based on the intraspecific sequence variation. 5. Our approach indicates that high‐throughput sequencing of environmental samples is effective for reliable determination of dinophyte species in Bavarian lakes. We further discuss the importance of well‐curated reference databases that remain to be developed in the future.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 5
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    WILEY-BLACKWELL PUBLISHING
    In:  EPIC3Ecology Letters, WILEY-BLACKWELL PUBLISHING, ISSN: 1461-023X
    Publication Date: 2017-11-14
    Description: Ecological stability is the central framework to understand an ecosystem’s ability to absorb or recover from environmental change. Recent modelling and conceptual work suggests that stability is a multidimensional construct comprising different response aspects. Using two freshwater mesocosm experiments as case studies, we show how the response to single perturbations can be decomposed in different stability aspects (resistance, resilience, recovery, temporal stability) for both ecosystem functions and community composition. We find that extended community recovery is tightly connected to a nearly complete recovery of the function (biomass production), whereas systems with incomplete recovery of the species composition ranged widely in their biomass compared to controls. Moreover, recovery was most complete when either resistance or resilience was high, the latter associated with low temporal stability around the recovery trend. In summary, no single aspect of stability was sufficient to reflect the overall stability of the system.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 6
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    Springer
    In:  EPIC3Building Bridges at the Science-Stakeholder Interface, Building Bridges at the Science-Stakeholder Interface, Springer, 133 p., pp. 73-78, ISBN: 978-3-319-75919-7
    Publication Date: 2019-08-15
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , peerRev , info:eu-repo/semantics/other
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  • 7
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    WILEY-BLACKWELL PUBLISHING
    In:  EPIC3Journal of Applied Ichthyology, WILEY-BLACKWELL PUBLISHING, 28(5), pp. 756-765, ISSN: 0175-8659
    Publication Date: 2019-07-17
    Description: The aim of this study was to determine the macro-parasitic infestation level of oysters from the southern German Bight focussing on copepods of the genus Mytilicola. Crassostrea gigas, Ostrea edulis and Mytilus edulis were collected at five locations: three nearshore sites in the eastern Wadden Sea and two offshore cultivation sites in the German Bight. To reveal seasonal variations one sampling site was investigated in winter and summer. At the nearshore sites, Mytilicola orientalis was regularly detected in C. gigas. Prevalences ranged between 32.3% and 45.1%, intensity between 3.0 ± 0.6 and 8.2 ± 1.5. Infestation rates of C. gigas within the southern German Bight decreased from west to east: Apparently, M. orientalis has started its range extension along the German coast with gradual retardation eastwards but generally followed the invasion route of its main host, the Pacific oyster. Interestingly, we detected not only M. intestinalis but also M. orientalis as an intestinal parasite in M. edulis, which has sofar not previously been described as host within this region. We conclude that M. orientalis is flexible in its host choice. Furthermore, in the eastern Wadden Sea infestation rates of oysters and mussels by copepods are similar. These results deviate from the patterns observed for the northern Wadden Sea in terms of infestation level and host specificity. No macro-parasites were found in oysters and mussels from the offshore sites. This absence can be considered as potentially beneficial for aquaculture activities in the open ocean in terms of stamina and physiological performance.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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  • 8
    Publication Date: 2024-03-20
    Description: In a volcanic crisis, authorized decision-makers must balance the social and economic costs of mitigating actions, such as evacuation, against the potential human losses if such actions are insufficient. In making their decisions, advice is needed from volcanologists on the eruption probability. Therefore, there should be a clear separation in the roles of volcanologists and decision-makers; the volcanologists should advise on the volcano hazard and alternative potential scenarios but refrain from involvement in making decisions. Currently, volcanologists are responsible for setting volcano alert levels. Given the small handful of distinct alert levels, there is inherent ambiguity and substantial uncertainty in the interpretation of individual levels. Furthermore, changing an alert level may automatically trigger actions by decision-makers. This would violate the principle of separation of responsibility and may result in unwelcome pressure being applied to volcanologists. Just as physicians can invoke medical ethics in resisting pressure to alter their advice, so volcanologists can invoke geoethics. Freedom to abide by their scientific beliefs is a basic tenet of geoethics.
    Description: Published
    Description: 19-23
    Description: Terceira Island, Azores (Portugal)
    Description: 4SR TERREMOTI - Preparazione alla comunicazione in emergenza
    Description: 6SR VULCANI – Servizi e ricerca per la società
    Description: 1TM. Formazione
    Description: 3TM. Comunicazione
    Keywords: volcano ; crisis ; evacuation ; geoethics ; responsibility ; 05.03. Educational, History of Science, Public Issues ; 05.09. Miscellaneous ; 04.08. Volcanology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: book chapter
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  • 9
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    WILEY-BLACKWELL PUBLISHING
    In:  EPIC3Reviews in Aquaculture, WILEY-BLACKWELL PUBLISHING, ISSN: 1753-5131
    Publication Date: 2019-07-17
    Description: There is significant commercial and research interest in the application of sea cucumbers as nutrient recyclers and processors of particulate waste in polyculture or integrated multitrophic aquaculture (IMTA) systems. The following article reviews examples of existing IMTA systems operating with sea cucumbers, and details the role and effect of several sea cucumber species in experimental and pilot IMTA systems worldwide. Historical observations and quantification of impacts of sea cucumber deposit-feeding and locomotion are examined, as is the development and testing of concepts for the application of sea cucumbers in sediment remediation and site recovery. The extension of applied IMTA systems is reported, from basic piloting through to economically viable farming systems operating at commercial scales. The near-global recognition of the ecological and economic value of deposit-feeding sea cucumbers in IMTA applications within existing and developing aquaculture industries is discussed. Predictions and recommendations are offered for optimal development of sea cucumber IMTA globally. Future directions within the industry are indicated, and key areas of ecological, biological and commercial concern are highlighted to be kept in mind and addressed in a precautionary manner as the industry develops.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 10
    Publication Date: 2018-12-21
    Description: Gambierdiscus, a benthic dinoflagellate, produces ciguatoxins that cause the human illness Ciguatera. Ciguatoxins are polyether ladder compounds that have a polyketide origin, indicating that polyketide synthases (PKS) are involved in their production. We sequenced transcriptomes of Gambierdiscus excentricus and Gambierdiscus polynesiensis and found 264 contigs encoding single domain ketoacyl synthases (KS; G. excentricus: 106, G. polynesiensis: 143) and ketoreductases (KR; G. excentricus: 7, G. polynesiensis: 8) with sequence similarity to type I PKSs, as reported in other dinoflagellates. In addition, 24 contigs (G. excentricus: 3, G. polynesiensis: 21) encoding multiple PKS domains (forming typical type I PKSs modules) were found. The proposed structure produced by one of these megasynthases resembles a partial carbon backbone of a polyether ladder compound. Seventeen contigs encoding single domain KS, KR, s-malonyltransacylase, dehydratase and enoyl reductase with sequence similarity to type II fatty acid synthases (FAS) in plants were found. Type I PKS and type II FAS genes were distinguished based on the arrangement of domains on the contigs and their sequence similarity and phylogenetic clustering with known PKS/FAS genes in other organisms. This differentiation of PKS and FAS pathways in Gambierdiscus is important, as it will facilitate approaches to investigating toxin biosynthesis pathways in dinoflagellates.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
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