Description: As part of the activities of the Global Ecology and Oceanography of Harmful Algal Blooms (GEOHAB)programme, Open Science Meetings (OSMs) have been organized to discuss and synthesize research efforts on various aspects of harmful algal blooms (HABs), and to plan future collaborative activities relevant to the research theme. Within this framework, the steering committee of the GEOHAB Core Research Project on HABs in Fjords and Coastal Embayments has organized two OSMs. The first OSM was held in 2004 in Santiago, Chile; the major goals were to identify the primary research priorities and to initiate an agenda to further our understanding of HAB dynamics in these small-scale coastal systems. The second OSM was held in May 2012 in Victoria,Canada to highlight the progress accomplished since the first OSM and to focus attention on the importance of a comparative approach in conducting ecosystem studies to improve our understanding of HABs. This second OSM addressed four major themes for which significant advances have been made in recent years, with particular focus on their application to semi-enclosed basins linked to coastal ecosystems: (1) Life history of HAB species; (2) Chemical ecological and toxin interactions; (3) Genetic diversity and (4) Transport and mixing of blooms in small-scale, mesoscale and semi-confined systems. This Report presents the major outcomes of this OSM, followed by recommendations for future collaborative studies. These recommendations include the maintenance of international activities on the ecology and oceanography of HABs after the end of the GEOHAB programme in December 2013. A future agenda should focus on a few key questions with clearly identifiable deliverables. These questions should include the development of (i) improved methods to determine the rates of cyst formation and germination in the field, and (ii) coupled biological-physical-chemical models more appropriate to small-scale environments and which incorporate the role of allelochemicals and toxins, as well as the pelagic and benthic coupling components. Research devoted to life history stages should be continued, particularly with respect to fish-killing algal species that cause particular damage in coastal environments. The influence of aquaculture activities on the development of HABs is poorly understood and should be of greater concern in future research on HABs. The influence of climate change, which may be exacerbated in coastal environments, also should be a focus of future research. Long-term ecological research should be encouraged in this respect, in order to make better predictions in the future concerning the development of HABs in coastal environments.

Description: Consumption of natural resources should not exceed sustainable levels. The increasing use of biofuels and to some extent biomaterials, on top of rising food and feed demands, is causing countries to use a growing amount of global land, which may lead to land use conflicts and the expansion of cropland and intensive cultivation at the expense of natural ecosystems. Selective product certification cannot control the land use change triggered by growing overall biomass consumption. We propose a comprehensive approach to account for the global land use of countries for their domestic consumption, and assess this level with regard to globally acceptable levels of resource use, based on the concept of safe operating space. It is shown that the European Union currently uses one-third more cropland than globally available on a per capita basis and that with constant consumption levels it would exceed its fair share of acceptable resource use in 2030. As the use of global forests to meet renewable energy targets is becoming a concern, an approach to account for sustainable levels of timber flows is also proposed, based on the use of net annual increment, exemplified with preliminary data for Switzerland. Altogether, our approach would integrate the concept of sustainable consumption into national resource management plans; offering a conceptual basis and concrete reference values for informed policy making and urging countries to monitor and adjust their levels of resource consumption in a comprehensive way, respectful of the limits of sustainable supply.

Description: Tourism in Antarctica is increasing, with visitors mostly choosing ship cruises often advertised as “Last chance tourism” taking advantage of increasing climate change awareness. While the existing guidelines for tourist operators are designed to protect this fragile region, many aspects of the local fauna, such as animal distribution and behavior, are still largely unknown due to difficulties studying these species. Without supporting data, it is challenging to design effective measures that minimize negative impacts of cruise ships on the Antarctic environment. A potential negative impact is the anthropogenic underwater noise generated by the vessels visiting the areas. Marine mammals rely on sound for many purposes such as foraging, orientation and reproduction. Ship noise can therefore potentially affect critical life phases of these species. Here we present a case study investigating how vessel acoustic presence affects the vocal behavior and timing of acoustic presence of leopard seals (Hydrurga leptonyx, LS) and Ross seals (Ommatophoca rossii, RS). RS are one of the least studied Antarctic species. Both pinniped spe cies are known to mainly produce underwater sounds during the mating season, presumably to attract mating partners in pack-ice areas. The German research icebreaker Polarstern (PS) annually resupplies Neumayer Station III (NS) - the German Antarctic Research Facility. Its arrival at the pier where cargo is unloaded has been noted to coincide with the onset of pinniped vocal activity in this area. Here, we use passive acoustic data that were recorded close to the pier over a 5-year period to investigate and compare how seal vocal behavior and vocal activity relate to the timing of ship arrival, presence and departure. The seals’ behavior over the relatively short analysis period of 5 years was complex due to their natural calling variation within life phases (before, during and after mating season). Thus, interpretation was not always straightforward. The arrival timing of the PS had an effect on RS, which delayed their appearance in 2010 and 2011 coinciding with the anticipated arrival of the ice-breaker. However, once arrived, both species showed no avoidance behavior and calling times remained unchanged despite PS. LS and RS calling activity decreased significantly during PS presence, but tended to recover instantly post PS departure. It is therefore unlikely that the animals left the area completely and decrease in calling may instead be related to masking. However, further research is needed to further explore what caused the decrease in calling. Both LS and RS seemed to use higher frequency call types during PS presence. The seals’ arrival times are also affected by prevailing ice conditions and associated food distribution. LS arrival time differed within the 5 years, whereas the RS arrived slightly earlier each year. The marine soundscape planning approach was applied to explore how ship arrivals can be timed to minimize potential disturbances. Ship quietening techniques and reduced ship speeds can also contribute to reduced underwater noise levels. Lastly, stricter legislative measures are needed to regulate which regions during which periods can be used for tourism.

Description: The study "Review of voluntary approaches in the European Union" has been conducted in the context of the project "Feasibility study on demonstration of voluntary approaches for industrial environmental management in China" and aims at evaluating the experience with voluntary agreements between industry and public authorities in the European Union. It is part of a comparative study between Europe and China. The study aims at providing a basis for adoption and further development of voluntary agreements in China. Therefore, conceptual information and case studies are presented in order to illustrate the instrument, its chances and risks as well as success factors.

Description: Widespread global declines in shellfish reefs (ecosystem-forming bivalves such as oysters and mussels) have led to growing interest in their restoration and protection. With restoration projects now occurring on four continents and in at least seven countries, global restoration guidelines for these ecosystems have been developed based on experience over the past two decades. The following key elements of the guidelines are outlined: (a) the case for shellfish reef resto- ration and securing financial resources; (b) planning, feasibility, and goal set- ting; (c) biosecurity and permitting; (d) restoration in practice; (e) scaling up from pilot to larger scale restoration, (f) monitoring, (g) restoration beyond oyster reefs (specifically mussels), and (h) successful communication for shell- fish reef restoration projects.

Description: The application of semantic technologies to the integration of biological data and the interoperability of bioinformatics analysis and visualization tools has been the common theme of a series of annual BioHackathons hosted in Japan for the past five years. Here we provide a review of the activities and outcomes from the BioHackathons held in 2011 in Kyoto and 2012 in Toyama. In order to efficiently implement semantic technologies in the life sciences, participants formed various sub-groups and worked on the following topics: Resource Description Framework (RDF) models for specific domains, text mining of the literature, ontology development, essential metadata for biological databases, platforms to enable efficient Semantic Web technology development and interoperability, and the development of applications for Semantic Web data. In this review, we briefly introduce the themes covered by these sub-groups. The observations made, conclusions drawn, and software development projects that emerged from these activities are discussed.