Description: Seasonal lipid dynamics of various developmental stages were investigated in Pseudocalanus minutus and Oithona similis. For P. minutus, the dominance of 16:1(n−7), 16:4(n−3) and 20:5(n−3) fatty acids indicated a diatom-based nutrition in spring, whereas 22:6(n−3), 16:0, 18:2(n−6) and 18:1(n−9) pointed to a flagellate-based diet during the rest of the year as well as omnivorous/carnivorous low-level feeding during winter. The shorter-chain fatty alcohols 14:0 and 16:0 prevailed, also reflecting biosynthetic processes typical of omnivores or carnivores. Altogether, the lipid signatures characterized P. minutus as an opportunistic feeder. In contrast, O. similis had consistently high amounts of the 18:1(n−9) fatty acid in all stages and during all seasons pointing to a generally omnivorous/carnivorous/detritivorous diet. Furthermore, the fatty alcohol 20:1(n−9) reached high percentages especially in adult females and males, and feeding on Calanus faecal pellets is suggested. Fatty alcohols, as wax ester moieties, revealed significant seasonal variations in O. similis and a seasonal trend towards wax ester accumulation in autumn in P. minutus. P. minutus utilized its lipid deposits for development in the copepodite stages III and IV and for gonad maturation in CV and females during the dark season. However, CVs and females depended on the spring phytoplankton bloom for final maturation processes and reproduction. O. similis fueled gonad maturation and egg production for reproduction in June by wax esters, whereas reproduction in August/September co-occurred with the accumulation of new depot lipids. Both species revealed significantly higher wax ester levels in deeper (〉50 m) as compared to surface (0–50 m) dwelling individuals related to a descent prior to overwintering.

Description: Abundance, distribution, population structure, lipid content, lipid composition and reproductive and feeding activity of Rhincalanus nasutus were studied in the Gulf of Aqaba and in the northern Red Sea during RV “Meteor”-cruise M 44-2 in February/March 1999. Rhincalanus nasutus occurred in higher numbers in the Gulf of Aqaba (585 ind m−2) than in the northern Red Sea (254 ind m−2). Young developmental stages (nauplii, copepodite stages CI and CII) were absent. In the southern Gulf of Aqaba, the bulk of the population developed from stage CV to adult in the course of the 3-week study period. In contrast, immature CV stages dominated at the adjacent stations in the northern Gulf of Aqaba and in the northern Red Sea. Development was associated with the seasonal vertical migration from wintering mid-water layers and initiation of feeding starting as early as beginning of March in the southern Gulf of Aqaba. No upward migration was observed in the northern parts of the Gulf and in the northern Red Sea, where more than 90% of the females remained immature during our study. Lipids were dominated by wax esters in females and CV. The fatty acid and fatty alcohol compositions of females were very similar throughout the study region and period. Major fatty acids were 18:1(n−9), 16:1(n−7), 16:2(n−4) and 20:5(n−3). Our results support the previous reports of a seasonal dormancy of R. nasutus in the Gulf of Aqaba and suggest that the timing of vertical migration, feeding and maturation is closely coupled to the development of the spring bloom in oligotrophic subtropical waters.

Description: The abundance and vertical distribution of microcopepods sampled by nets with 55 μm mesh size was compared for two neighbouring but hydrographically different areas, the Gulf of Aqaba and the northernmost Red Sea, during spring 1999. The vertical structure of the total microcopepod communities differed considerably between the two regimes: In the stratified waters of the Red Sea, calanoids outnumbered oncaeids as well as oithonids at 0–100 m, whereas oncaeids dominated in all meso- and bathypelagic layers below 100 m deep. In the unusually deep vertically mixed waters of the Gulf of Aqaba, calanoids outnumbered each of the non-calanoid taxa as deep as 250 or 350 m, whereas the oncaeid dominated deep water community was restricted to depth ranges below 400 m. Dominant non-calanoid species in both areas were Oncaea bispinosa, Paroithona pacifica, Oithona simplex, Spinoncaea ivlevi, O. tregoubovi and O. cristata. O. scottodicarloi occurred in exceptionally high numbers in the northern Gulf. Pronounced differences between the two areas were found in the vertical distribution of poecilostomatoid species. By comparing the present results with published data from the central and southern Red Sea and other tropical and warm-temperate oceanic areas, intra- and inter-oceanic differences in the structure of microcopepod communities in oligotrophic areas are discussed. The high abundance and vertically extended range of calanoid copepods during spring appears to be a specific feature of the Gulf of Aqaba, indicating an unusual vertical succession in the trophodynamic structure of the copepod fauna in this area.

Description: The northern Humboldt Current upwelling system (HCS) belongs to the most productive marine ecosystems, providing five to eight times higher fisheries landings per unit area than other coastal upwelling systems. To solve this “Peruvian puzzle”, to elucidate the pelagic food-web structure and to better understand trophic interactions in the HCS, a combined stable isotope and fatty acid trophic biomarker approach was adopted for key zooplankton taxa and higher trophic positions with an extensive spatial coverage from 8.5 to 16°S and a vertical range down to 1,000 m depth. A pronounced regional shift by up to ∼5‰ in the δ15N baseline of the food web occurred from North to South. Besides regional shifts, δ15N ratios of particulate organic matter (POM) also tended to increase with depth, with differences of up to 3.8‰ between surface waters and the oxygen minimum zone. In consequence, suspension-feeding zooplankton permanently residing at depth had up to ∼6‰ higher δ15N signals than surface-living species or diel vertical migrants. The comprehensive data set covered over 20 zooplankton taxa and indicated that three crustacean species usually are key in the zooplankton community, i.e., the copepods Calanus chilensis at the surface and Eucalanus inermis in the pronounced OMZ and the krill Euphausia mucronata, resulting in an overall low number of major trophic pathways toward anchovies. In addition, the semi-pelagic squat lobster Pleuroncodes monodon appears to play a key role in the benthic-pelagic coupling, as indicated by highest δ13C’ ratios of −14.7‰. If feeding on benthic resources and by diel vertical migration, they provide a unique pathway for returning carbon and energy from the seafloor to the epipelagic layer, increasing the food supply for pelagic fish. Overall, these mechanisms result in a very efficient food chain, channeling energy toward higher trophic positions and partially explaining the “Peruvian puzzle” of enormous fish production in the HCS.

Description: Highlights: • Environmental conditions cause specific zooplankton life strategies. • No ontogenetic or diel vertical migration in the life cycle of Calanus chilensis. • Spatial expansion of Calanus chilensis secondary production far offshore. • Compacted surface biomass of Calanus chilensis allows easy foraging by anchovy. Abstract: Calanid copepods of the genera Calanus and Calanoides are key components of zooplankton communities in upwelling systems. Here, we compare the life-history traits of Calanus chilensis from the Humboldt Current Systems (HCS) off northern Peru and its counterpart Calanoides natalis from the northern Benguela Current System (BCS) off Namibia. A comprehensive data set of the distribution and abundance patterns of these species along extensive horizontal and vertical scales is presented. C. chilensis from the HCS was almost exclusively restricted to the surface layer (50–0 m) above the oxygen minimum zone (OMZ), whereas C. natalis from the BCS inhabited the entire water column down to 800 m performing ontogenetic vertical migration (OVM) through the OMZ. Resting stages of C. natalis at depth accumulated high amounts of lipid (30–60% of dry mass, DM), whereas C. chilensis did not rely on lipid reserves. These findings confirm that the life cycle of C. chilensis does not include OVM with diapause at depth. Surprisingly, the regional distribution of C. chilensis secondary production extended much further offshore (〉200 km from the coast) than is typical of other coastal upwelling systems. Deviating environmental conditions forced the two key calanid species to develop specific, but different life strategies for HCS and BCS. Compacted biomass concentrations of C. chilensis in the surface layer from the shelf (≤3 g DM m−2) to offshore waters (≤1.5 g DM m−2) facilitate easy and efficient foraging by predators such as juvenile Peruvian anchovies. In contrast, a large fraction of the C. natalis biomass occurs within the OMZ and is thus out of reach for hypoxia-sensitive predators. Calanoid copepods (e.g. C. chilensis) play a crucial role as important prey for growth and recruitment of small pelagic fish. Thus, the compacted biomass and high productivity of C. chilensis at the surface derived from its adaptive life-history traits (no OVM) may explain the superior trophic transfer efficiency and hence enormous fisheries yield of the HCS compared to the BCS.

Description: The Humboldt Current Upwelling System (HCS) is the most productive eastern boundary upwelling system (EBUS) in terms of fishery yield on the planet. EBUSs are considered hotspots of climate change with predicted expansion of mesopelagic oxygen minimum zones (OMZs) and related changes in the frequency and intensity of upwelling of nutrient-rich, low-oxygen deep water. To increase our mechanistic understanding of how upwelling impacts plankton communities and trophic links, we investigated mesozooplankton community succession and gut fluorescence, fatty acid and elemental compositions (C, N, O, P), and stable isotope (δ13C, δ15N) ratios of dominant mesozooplankton and microzooplankton representatives in a mesocosm setup off Callao (Peru) after simulated upwelling with OMZ water from two different locations and different N:P signatures (moderate and extreme treatments). An oxycline between 5 and 15 m with hypoxic conditions (〈50 µmol L−1) below ∼10 m persisted in the mesocosms throughout the experiment. No treatment effects were determined for the measured parameters, but differences in nutrient concentrations established through OMZ water additions were only minor. Copepods and polychaete larvae dominated in terms of abundance and biomass. Development and reproduction of the dominant copepod genera Paracalanus sp., Hemicyclops sp., Acartia sp., and Oncaea sp. were hindered as evident from accumulation of adult copepodids but largely missing nauplii. Failed hatching of nauplii in the hypoxic bottom layer of the mesocosms and poor nutritional condition of copepods suggested from very low gut fluorescence and fatty acid compositions most likely explain the retarded copepod development. Correlation analysis revealed no particular trophic relations between dominant copepods and phytoplankton groups. Possibly, particulate organic matter with a relatively high C:N ratio was a major diet of copepods. C:N ratios of copepods and polychaetes ranged 4.8–5.8 and 4.2–4.3, respectively. δ15N was comparatively high (∼13 ‰–17 ‰), potentially because the injected OMZ source water was enriched in δ15N as a result of anoxic conditions. Elemental ratios of dinoflagellates deviated strongly from the Redfield ratio. We conclude that opportunistic feeding of copepods may have played an important role in the pelagic food web. Overall, projected changes in the frequency and intensity of upwelling hypoxic waters may make a huge difference for copepod reproduction and may be further enhanced by varying N:P ratios of upwelled OMZ water masses.