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  • 1
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Evolutionary Applications 11 (2018): 1915-1930, doi:10.1111/eva.12696.
    Description: Studying population genetics of deep‐sea animals helps us understand their history of habitat colonization and population divergence. Here, we report a population genetic study of the deep‐sea mussel Bathymodiolus platifrons (Bivalvia: Mytilidae) widely distributed in chemosynthesis‐based ecosystems in the Northwest Pacific. Three mitochondrial genes (i.e., atp6, cox1, and nad4) and 6,398 genomewide single nucleotide polymorphisms (SNPs) were obtained from 110 individuals from four hydrothermal vents and two methane seeps. When using the three mitochondrial genes, nearly no genetic differentiation was detected for B. platifrons in the Northwest Pacific. Nevertheless, when using SNP datasets, all individuals in the South China Sea (SCS) and three individuals in Sagami Bay (SB) together formed one genetic cluster that was distinct from the remaining individuals. Such genetic divergence indicated a genetic barrier to gene flow between the SCS and the open Northwest Pacific, resulting in the co‐occurrence of two cryptic semi‐isolated lineages. When using 125 outlier SNPs identified focusing on individuals in the Okinawa Trough (OT) and SB, a minor genetic subdivision was detected between individuals in the southern OT (S‐OT) and those in the middle OT (M‐OT) and SB. This result indicated that, although under the influence of the Kuroshio Current and the North Pacific Intermediate Water, subtle geographic barriers may exist between the S‐OT and the M‐OT. Introgression analyses based on these outlier SNPs revealed that Hatoma Knoll in the S‐OT represents a possible contact zone for individuals in the OT‐SB region. Furthermore, migration dynamic analyses uncovered stronger gene flow from Dai‐yon Yonaguni Knoll in the S‐OT to the other local populations, compared to the reverse directions. Taken together, the present study offered novel perspectives on the genetic connectivity of B. platifrons mussels, revealing the potential interaction of ocean currents and geographic barriers with adaption and reproductive isolation in shaping their migration patterns and genetic differentiation in the Northwest Pacific.
    Description: General Research Fund Grant Number: HKBU12302917; Hong Kong Baptist University Grant Number: 15‐1012‐P04
    Keywords: Bathymodiolus ; Deep‐sea ; Genetic structure ; Introgression ; Migration patterns ; Mitochondrial genes ; Population connectivity ; RAD‐seq
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2014. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 119 (2014): 2462–2479, doi:10.1002/2013JC009385.
    Description: In this study, we examine the importance of regional wind forcing in modulating advective processes and hydrographic properties along the Northwest Atlantic shelf, with a focus on the Nova Scotian Shelf (NSS)-Gulf of Maine (GoM) region. Long-term observational data of alongshore wind stress, sea level slope, and along-shelf flow are analyzed to quantify the relationship between wind forcing and hydrodynamic responses on interannual time scales. Additionally, a simplified momentum balance model is used to examine the underlying mechanisms. Our results show significant correlation among the observed interannual variability of sea level slope, along-shelf flow, and alongshore wind stress in the NSS-GoM region. A mechanism is suggested to elucidate the role of wind in modulating the sea level slope and along-shelf flow: stronger southwesterly (northeastward) winds tend to weaken the prevailing southwestward flow over the shelf, building sea level in the upstream Newfoundland Shelf region, whereas weaker southwesterly winds allow stronger southwestward flow to develop, raising sea level in the GoM region. The wind-induced flow variability can influence the transport of low-salinity water from the Gulf of St. Lawrence to the GoM, explaining interannual variations in surface salinity distributions within the region. Hence, our results offer a viable mechanism, besides the freshening of remote upstream sources, to explain interannual patterns of freshening in the GoM.
    Description: This work was supported by NOAA’s Fisheries and the Environment Program, Grant #12-03 and through NOAA Cooperative Agreement NA09OAR4320129.
    Description: 2014-10-16
    Keywords: Wind ; Sea level ; Flow ; Salinity ; Interannual variability ; Northwest Atlantic shelf
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 3
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 121 (2016); 934–948, doi:10.1002/2015JC011183.
    Description: Previous observational studies have found increasing primary production (PP) in response to declining sea ice cover in the Arctic Ocean. In this study, under-ice PP was assessed based on three coupled ice-ocean-ecosystem models participating in the Forum for Arctic Modeling and Observational Synthesis (FAMOS) project. All models showed good agreement with under-ice measurements of surface chlorophyll-a concentration and vertically integrated PP rates during the main under-ice production period, from mid-May to September. Further, modeled 30-year (1980–2009) mean values and spatial patterns of sea ice concentration compared well with remote sensing data. Under-ice PP was higher in the Arctic shelf seas than in the Arctic Basin, but ratios of under-ice PP over total PP were spatially correlated with annual mean sea ice concentration, with higher ratios in higher ice concentration regions. Decreases in sea ice from 1980 to 2009 were correlated significantly with increases in total PP and decreases in the under-ice PP/total PP ratio for most of the Arctic, but nonsignificantly related to under-ice PP, especially in marginal ice zones. Total PP within the Arctic Circle increased at an annual rate of between 3.2 and 8.0 Tg C/yr from 1980 to 2009. This increase in total PP was due mainly to a PP increase in open water, including increases in both open water area and PP rate per unit area, and therefore much stronger than the changes in under-ice PP. All models suggested that, on a pan-Arctic scale, the fraction of under-ice PP declined with declining sea ice cover over the last three decades.
    Description: NASA Grant Number: NNX13AE81G; the NSF Office of Polar Programs Grant Number: (ARC-0968676, PLR-1417925, PLR-1417677 and PLR-1416920); the NASA Cryosphere Grant Number: (NNX12AB31G); Climate and Biological Response Grant Number: (NNX11AO91G)
    Description: 2016-07-27
    Keywords: Ecosystem modeling ; Sea ice ; Under-ice production ; Phenology ; Primary production ; Arctic Ocean
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 4
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 121 (2016): 6137-6158, doi:10.1002/2016JC011784.
    Description: Early ice retreat and ocean warming are changing various facets of the Arctic marine ecosystem, including the biogeographic distribution of marine organisms. Here an endemic copepod species, Calanus glacialis, was used as a model organism, to understand how and why Arctic marine environmental changes may induce biogeographic boundary shifts. A copepod individual-based model was coupled to an ice-ocean-ecosystem model to simulate temperature- and food-dependent copepod life history development. Numerical experiments were conducted for two contrasting years: a relatively cold and normal sea ice year (2001) and a well-known warm year with early ice retreat (2007). Model results agreed with commonly known biogeographic distributions of C. glacialis, which is a shelf/slope species and cannot colonize the vast majority of the central Arctic basins. Individuals along the northern boundaries of this species' distribution were most susceptible to reproduction timing and early food availability (released sea ice algae). In the Beaufort, Chukchi, East Siberian, and Laptev Seas where severe ocean warming and loss of sea ice occurred in summer 2007, relatively early ice retreat, elevated ocean temperature (about 1–2°C higher than 2001), increased phytoplankton food, and prolonged growth season created favorable conditions for C. glacialis development and caused a remarkable poleward expansion of its distribution. From a pan-Arctic perspective, despite the great heterogeneity in the temperature and food regimes, common biogeographic zones were identified from model simulations, thus allowing a better characterization of habitats and prediction of potential future biogeographic boundary shifts.
    Description: National Science Foundation Polar Programs Grant Number: (PLR-1417677, PLR-1417339, and PLR-1416920)
    Description: 2017-02-20
    Keywords: Arctic Ocean ; Marine ecosystem ; Climate change ; Biogeography ; Individual-based model ; C. glacialis
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 5
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 43 (2016): 2086–2093, doi:10.1002/2016GL067937.
    Description: Phytoplankton in Antarctic coastal polynyas has a temporally short yet spatially variant growth window constrained by ice cover and day length. Using 18-year satellite measurements (1997–2015) of sea ice and chlorophyll concentrations, we assessed the synchronicity between the spring phytoplankton bloom and light availability, taking into account the ice cover and the incident solar irradiance, for 50 circum-Antarctic coastal polynyas. The synchronicity was strong (i.e., earlier ice-adjusted light onset leads to earlier bloom and vice versa) in most of the western Antarctic polynyas but weak in a majority of the eastern Antarctic polynyas. The west-east asymmetry is related to sea ice production rate: the formation of many eastern Antarctic polynyas is associated with strong katabatic wind and high sea ice production rate, leading to stronger water column mixing that could damp phytoplankton blooms and weaken the synchronicity.
    Description: This research was funded by NASA (grant NNX14AH74G) and U.S. National Science Foundation (grant PLR-1341558).
    Description: 2016-09-05
    Keywords: Phenology ; Synchronicity ; Phytoplankton ; Ice retreat ; Antarctic polynya
    Repository Name: Woods Hole Open Access Server
    Type: Article
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