GLORIA

GEOMAR Library Ocean Research Information Access

feed icon rss

Your email was sent successfully. Check your inbox.

An error occurred while sending the email. Please try again.

Proceed reservation?

Export
Filter
Document type
Keywords
  • 1
    Publication Date: 2023-08-04
    Description: Experiment measuring mass of a single coccolithophore cell every minute for near 9h. The coccolithophore is a Gephyrocapsa huxleyi culture strain RCC1216 from the Roscoff Culture Collection. A multi-well plate containing a low-density culture of calcifying cells grown in K/2 culture medium (Keller et al., 1987) was placed on the stage of an inverted microscope Leica DMi8 with a Smarteck GC3851MP camera, installed in a climate-controlled room (20°C) at the Biological Station of Roscoff and illuminated with large-spectrum white LED lights with an intensity of ca. 100 µmol.m-2.s-1. The coccolithophore produced 9 coccoliths during the experiment. The mass of individual coccospheres (in pg CaCO3) was estimated from their birefringence quantified from the images (Beaufort et al., 2014). Each produced coccolith was heavier than the previous one. The cell was most probably in G1 interphase and thus growing during the experiment.
    Keywords: coccolith; coccolithophore; culture experiment; life cycle; Mass; Quality flag, time; Sample comment; see Beaufort et al. (2014)
    Type: Dataset
    Format: text/tab-separated-values, 1612 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 2
    facet.materialart.
    Unknown
    PANGAEA
    In:  Supplement to: Ziveri, Patrizia; Thoms, Silke; Probert, Ian; Geisen, Markus; Langer, Gerald (2012): A universal carbonate ion effect on stable oxygen isotope ratios in unicellular planktonic calcifying organisms. Biogeosciences, 9, 1025-1032, https://doi.org/10.5194/bg-9-1025-2012
    Publication Date: 2023-11-25
    Description: The oxygen isotopic composition (d18O) of calcium carbonate of planktonic calcifying organisms is a key tool for reconstructing both past seawater temperature and salinity. The calibration of paloeceanographic proxies relies in general on empirical relationships derived from field experiments on extant species. Laboratory experiments have more often than not revealed that variables other than the target parameter influence the proxy signal, which makes proxy calibration a challenging task. Understanding these secondary or "vital" effects is crucial for increasing proxy accuracy. We present data from laboratory experiments showing that oxygen isotope fractionation during calcification in the coccolithophore Calcidiscus leptoporus and the calcareous dinoflagellate Thoracosphaera heimii is dependent on carbonate chemistry of seawater in addition to its dependence on temperature. A similar result has previously been reported for planktonic foraminifera, supporting the idea that the [CO3]2- effect on d18O is universal for unicellular calcifying planktonic organisms. The slopes of the d18O/[CO3]2- relationships range between -0.0243 per mil/(µmol/kg) (calcareous dinoflagellate T. heimii) and the previously published -0.0022 per mil/(µmol/kg) (non-symbiotic planktonic foramifera Orbulina universa), while C. leptoporus has a slope of -0.0048 per mil/(µmol/kg). We present a simple conceptual model, based on the contribution of d18O-enriched [HCO3]- to the [CO3]2- pool in the calcifying vesicle, which can explain the [CO3]2- effect on d18O for the different unicellular calcifiers. This approach provides a new insight into biological fractionation in calcifying organisms. The large range in d18O/[CO3]2- slopes should possibly be explored as a means for paleoreconstruction of surface [CO3]2-, particularly through comparison of the response in ecologically similar planktonic organisms.
    Keywords: Calcite saturation state; Carbonate ion; Carbon dioxide, partial pressure; Fractionation factor; Mediterranean Sea Acidification in a Changing Climate; MedSeA; pH; Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas; Species; SPP1158; Δδ18O
    Type: Dataset
    Format: text/tab-separated-values, 192 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 3
    facet.materialart.
    Unknown
    PANGAEA
    In:  Supplement to: Langer, Gerald; Probert, Ian; Nehrke, Gernot; Ziveri, Patrizia (2011): The morphological response of Emiliania huxleyi to seawater carbonate chemistry changes: an inter-strain comparison. Journal of Nannoplankton Research, 32(1), 29-34, hdl:10013/epic.37875.d001
    Publication Date: 2024-03-15
    Description: Four strains of the coccolithophore Emiliania huxleyi (RCC1212, RCC1216, RCC1238, RCC1256) were grown in dilute batch culture at four CO2 levels ranging from ~200 µatm to ~1200 µatm. Coccolith morphology was analyzed based on scanning electron micrographs. Three of the four strains did not exhibit a change in morphology over the CO2 range tested. One strain (RCC1256) displayed an increase in the percentage of malformed coccoliths with increasing CO2 concentration. We conclude that the sensitivity of the coccolith-shaping machinery to carbonate chemistry changes is strain-specific. Although it has been shown before that carbonate chemistry related changes in growth- and calcification rate are strain-specific, there seems to be no consistent correlation between coccolith morphology and growth or calcification rate. We did not observe an increase in the percentage of incomplete coccoliths in RCC1256, indicating that the coccolith-shaping machinery per se is affected by acidification and not the signalling pathway that produces the stop-signal for coccolith growth.
    Keywords: Alkalinity, total; Aragonite saturation state; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chromista; Coccoliths, incomplete; Coccoliths, incomplete, standard deviation; Coccoliths, malformed and incomplete; Coccoliths, malformed and incomplete, standard deviation; Coccoliths, normal; Coccoliths, normal, standard deviation; Emiliania huxleyi; EPOCA; European Project on Ocean Acidification; Event label; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Haptophyta; Laboratory experiment; Laboratory strains; Malformation rate; Malformation rate, standard deviation; Mediterranean Sea Acidification in a Changing Climate; MedSeA; Nitrate; North_Atlantic_OA; North_Pacific_OA; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Phosphate; Phytoplankton; Potentiometric titration; Replicates; Salinity; Single species; South_Atlantic_OA; Species; Strain; Tasman_Sea_OA; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 496 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 4
    Publication Date: 2024-03-15
    Description: Coccolithophores are a calcifying unicellular phytoplankton group that are at the base of the marine food web, and their lipid content provides a source of energy to consumers. Coccolithophores are vulnerable to ocean acidification and warming, therefore it is critical to establish the effects of climate change on these significant marine primary producers, and determine potential consequences that these changes can have on their consumers. Here, we quantified the impact of changes in pH and temperature on the nutritional condition (lipid content, particulate organic carbon/nitrogen), growth rate, and morphology of the most abundant living coccolithophore species, Emiliania huxleyi. We used a regression type approach with nine pH levels (ranging from 7.66 to 8.44) and two temperatures (15°C and 20°C). Lipid production was greater under reduced pH, and growth rates were distinctly lower at 15°C than at 20°C. The production potential of lipids, which estimates the availability of lipids to consumers, increased under 20°C, but decreased under low pH. The results indicate that, while consumers will benefit energetically under ocean warming, this benefit will be mitigated by ocean acidification. The carbon to nitrogen ratio was higher at 20°C and low pH, indicating that the nutritional quality of coccolithophores for consumers will decline under climate change. The impact of low pH on the structural integrity of the coccosphere may also mean that coccolithophores are easier to digest for consumers. Many responses suggest cellular stress, indicating that increases in temperature and reductions in pH may have a negative impact on the ecophysiology of coccolithophores.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Aragonite saturation state; Bicarbonate ion; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, particulate, per cell; Carbon, inorganic, particulate, standard deviation; Carbon, organic, particulate, per cell; Carbon, organic, particulate, standard deviation; Carbon, organic, particulate/Nitrogen, particulate ratio; Carbon, organic, particulate/Nitrogen, particulate ratio, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cellular lipid quota/cellular particulate organic carbon quota; Cellular lipid quota/cellular particulate organic carbon quota, standard deviation; Chlorophyll a, production, standard deviation; Chlorophyll a, standard deviation; Chlorophyll a per cell; Chlorophyll a production per cell; Chromista; Coccosphere, diameter; Coccosphere, diameter, standard deviation; Coccospheres; Diameter; Diameter, standard deviation; Distal shield, length; Distal shield, length, standard deviation; Distal shield, width; Distal shield, width, standard deviation; Emiliania huxleyi; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Growth rate, standard deviation; Haptophyta; Laboratory experiment; Laboratory strains; Lipid production per cell; Lipid production per cell, standard deviation; Lipids, standard deviation; Lipids per cell; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Particulate inorganic carbon, production, standard deviation; Particulate inorganic carbon/particulate organic carbon ratio; Particulate inorganic carbon/particulate organic carbon ratio, standard deviation; Particulate inorganic carbon/total particulate nitrogen ratio; Particulate inorganic carbon/total particulate nitrogen ratio, standard deviation; Particulate inorganic carbon production per cell; Particulate organic carbon, production, standard deviation; Particulate organic carbon production per cell; Pelagos; pH; Phytoplankton; Primary production/Photosynthesis; Salinity; Single species; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Temperature; Temperature, water; Type; Width; Width, standard deviation
    Type: Dataset
    Format: text/tab-separated-values, 979 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 5
    facet.materialart.
    Unknown
    PANGAEA
    In:  Supplement to: Langer, Gerald; Nehrke, Gernot; Probert, Ian; Ly, J; Ziveri, Patrizia (2009): Strain-specific responses of Emiliania huxleyi to changing seawater carbonate chemistry. Biogeosciences, 6(11), 2637-2646, https://doi.org/10.5194/bg-6-2637-2009
    Publication Date: 2024-03-15
    Description: Four strains of the coccolithophore E. huxleyi (RCC1212, RCC1216, RCC1238, RCC1256) were grown in dilute batch culture at four CO2 levels ranging from ~200 µatm to ~1200 µatm. Growth rate, particulate organic carbon content, and particulate inorganic carbon content were measured, and organic and inorganic carbon production calculated. The four strains did not show a uniform response to carbonate chemistry changes in any of the analysed parameters and none of the four strains displayed a response pattern previously described for this species. We conclude that the sensitivity of different strains of E. huxleyi to acidification differs substantially and that this likely has a genetic basis. We propose that this can explain apparently contradictory results reported in the literature.
    Keywords: Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Aragonite saturation state; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcite saturation state; Calculated; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Chromista; Conductivity meter (WTW, Weilheim, Gemany); Element analyser CNS, EURO EA; Emiliania huxleyi; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Event label; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Growth rate, standard deviation; Haptophyta; Identification; Laboratory experiment; Laboratory strains; Nitrate; North_Atlantic_OA; North_Pacific_OA; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Particulate inorganic carbon, production, standard deviation; Particulate inorganic carbon/particulate organic carbon ratio; Particulate inorganic carbon/particulate organic carbon ratio, standard deviation; Particulate inorganic carbon per cell; Particulate inorganic carbon per cell, standard deviation; Particulate inorganic carbon production per cell; Particulate organic carbon, per cell; Particulate organic carbon, production, standard deviation; Particulate organic carbon content per cell, standard deviation; Particulate organic carbon production per cell; Pelagos; pH; Phosphate; Photometry; Phytoplankton; Primary production/Photosynthesis; Radiation, photosynthetically active; Salinity; Single species; South_Atlantic_OA; Tasman_Sea_OA; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 496 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 6
    facet.materialart.
    Unknown
    PANGAEA
    In:  Supplement to: Beaufort, Luc; Probert, Ian; de Garidel-Thoron, Thibault; Bendif, E M; Ruiz-Pino, Diana; Metzi, N; Goyet, Catherine; Buchet, Noëlle; Coupel, Pierre; Grelaud, Michaël; Rost, Björn; Rickaby, Rosalind E M; De Vargas, Colomban (2011): Sensitivity of coccolithophores to carbonate chemistry and ocean acidification. Nature, 476, 80-83, https://doi.org/10.1038/nature10295
    Publication Date: 2024-03-15
    Description: About one-third of the carbon dioxide (CO2) released into the atmosphere as a result of human activity has been absorbed by the oceans, where it partitions into the constituent ions of carbonic acid. This leads to ocean acidification, one of the major threats to marine ecosystems and particularly to calcifying organisms such as corals, foraminifera and coccolithophores. Coccolithophores are abundant phytoplankton that are responsible for a large part of modern oceanic carbonate production. Culture experiments investigating the physiological response of coccolithophore calcification to increased CO2 have yielded contradictory results between and even within species. Here we quantified the calcite mass of dominant coccolithophores in the present ocean and over the past forty thousand years, and found a marked pattern of decreasing calcification with increasing partial pressure of CO2 and concomitant decreasing concentrations of CO3. Our analyses revealed that differentially calcified species and morphotypes are distributed in the ocean according to carbonate chemistry. A substantial impact on the marine carbon cycle might be expected upon extrapolation of this correlation to predicted ocean acidification in the future. However, our discovery of a heavily calcified Emiliania huxleyi morphotype in modern waters with low pH highlights the complexity of assemblage-level responses to environmental forcing factors.
    Keywords: Age, dated; Alkalinity, total; Antarctic; Aragonite saturation state; Bicarbonate ion; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; CTD, Sea-Bird SBE 911plus; Emiliania huxleyi; Emiliania huxleyi, diameter; Emiliania huxleyi, weight; Emiliania huxleyi, weight, standard error; EPOCA; Estimated by measuring brightness in cross-polarized light (birefringence); EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Indian Ocean; LATITUDE; LONGITUDE; Measured and/or detected by SYRACO software; North Atlantic; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Phytoplankton; Replicates; Salinity; Sample ID; South Atlantic; South Pacific; Temperature, water; Titration potentiometric
    Type: Dataset
    Format: text/tab-separated-values, 16400 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 7
    facet.materialart.
    Unknown
    International Nannoplankton Association
    In:  Journal of Nannoplankton Research, 32 (1). pp. 29-34.
    Publication Date: 2020-07-21
    Type: Article , PeerReviewed
    Format: text
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 8
    Publication Date: 2019-03-08
    Description: Coccolithophores have influenced the global climate for over 200 million years1. These marine phytoplankton can account for 20 per cent of total carbon fixation in some systems2. They form blooms that can occupy hundreds of thousands of square kilometres and are distinguished by their elegantly sculpted calcium carbonate exoskeletons (coccoliths), rendering themvisible fromspace3.Although coccolithophores export carbon in the form of organic matter and calcite to the sea floor, they also release CO2 in the calcification process. Hence, they have a complex influence on the carbon cycle, driving either CO2 production or uptake, sequestration and export to the deep ocean4. Here we report the first haptophyte reference genome, from the coccolithophore Emiliania huxleyi strain CCMP1516, and sequences from 13 additional isolates. Our analyses reveal a pan genome (core genes plus genes distributed variably between strains) probably supported by an atypical complement of repetitive sequence in the genome. Comparisons across strains demonstrate thatE. huxleyi, which has long been considered a single species, harbours extensive genome variability reflected in different metabolic repertoires. Genome variability within this species complex seems to underpin its capacity both to thrive in habitats ranging from the equator to the subarctic and to form large-scale episodic blooms under a wide variety of environmental conditions.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 9
    Publication Date: 2020-08-21
    Description: Emiliania huxleyi cells were grown in artificial seawater of different Li and Ca concentrations and coccolith Li/Ca ratios determined. Coccolith Li/Ca ratios were positively correlated to seawater Li/Ca ratios only if the seawater Li concentration was changed, not if the seawater Ca concentration was changed. This Li partitioning pattern of E. huxleyi was previously also observed in the benthic foraminifer Amphistegina lessonii and inorganically precipitated calcite. We argue that Li partitioning in both E. huxleyi and A. lessonii is dominated by a coupled transmembrane transport of Li and Ca from seawater to the site of calcification. We present a refined version of a recently proposed transmembrane transport model for Li and Ca. The model assumes that Li and Ca enter the cell via Ca channels, the Li flux being dependent on the Ca flux. While the original model features a linear function to describe the experimental data, our refined version uses a power function, changing the stoichiometry of Li and Ca. The version presented here accurately predicts the observed dependence of DLi on seawater Li/Ca ratios. Our data demonstrate that minor element partitioning in calcifying organisms is partly mediated by biological processes even if the partitioning behavior of the calcifying organism is indistinguishable from that of inorganically precipitated calcium carbonate.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
    Format: application/pdf
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 10
    facet.materialart.
    Unknown
    Springer
    In:  EPIC3Handbook of the Protists, Handbook of the Protists, Springer, pp. 1-61, ISBN: 978-3-319-32669-6
    Publication Date: 2016-11-17
    Description: Haptophyta are predominantly planktonic and phototrophic organisms that have their main distribution in marine environments worldwide. They are a major component of the microbial ecosystem, some form massive blooms and some are toxic. Haptophytes are significant players in the global carbonate cycle through photosynthesis and calcification. They are characterized by the haptonema, a third appendage used for attachment and food handling, two similar flagella, two golden-brown chloroplasts, and organic body scales that serve in species identification. Coccolithophores have calcified scales termed coccoliths. Phylogenetically Haptophyta form a well-defined group and are divided into two classes Pavlovophyceae and Coccolithophyceae (Prymnesiophyceae). Currently, about 330 species are described. Environmental DNA sequencing shows high haptophyte diversity in the marine pico- and nanoplankton, of which many likely represent novel species and lineages. Haptophyte diversity is believed to have peaked in the past and their presence is documented in the fossil record back to the Triassic, approximately 225 million years ago. Some biomolecules of haptophyte origin are extraordinarily resistant to decay and are thus used by geologists as sedimentary proxies of past climatic conditions.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , peerRev
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
Close ⊗
This website uses cookies and the analysis tool Matomo. More information can be found here...