Description: We document differences in shell damage and shell thickness in a bivalve mollusc (Laternula elliptica) from seven sites around Antarctica with differing exposures to ice movement. These range from 60% of the sea bed impacted by ice per year (Hangar Cove, Antarctic Peninsula) to those protected by virtually permanent sea ice cover (McMurdo Sound). Patterns of shell damage consistent with blunt force trauma were observed in populations where ice scour frequently occurs; damage repair frequencies and the thickness of shells correlated positively with the frequency of iceberg scour at the different sites with the highest repair rates and thicker shells at Hangar Cove (74.2% of animals damaged) compared to the other less impacted sites (less than 10% at McMurdo Sound). Genetic analysis of population structure using Amplified Fragment Length Polymorphisms (AFLPs) revealed no genetic differences between the two sites showing the greatest difference in shell morphology and repair rates. Taken together, our results suggest that L. elliptica exhibits considerable phenotypic plasticity in response to geographic variation in physical disturbance.

Description: The three mussel species comprising the Mytilus complex are widespread across Europe and readily hybridize when they occur in sympatry, resulting in a mosaic of populations with varying genomic backgrounds. Two of these species, M. edulis and M. galloprovincialis, are extensively cultivated across Europe, with annual produc- tion exceeding 230,000 tonnes. The third species, M. trossulus, is considered com- mercially damaging as hybridization with this species results in weaker shells and poor meat quality. We therefore used restriction site associated DNA sequencing to generate high-resolution insights into the structure of the Mytilus complex across Europe and to resolve patterns of introgression. Inferred species distributions were concordant with the results of previous studies based on smaller numbers of ge- netic markers, with M. edulis and M. galloprovincialis predominating in northern and southern Europe respectively, while introgression between these species was most pronounced in northern France and the Shetland Islands. We also detected traces of M. trossulus ancestry in several northern European populations, especially around the Baltic and in northern Scotland. Finally, genome-wide heterozygosity, whether quantified at the population or individual level, was lowest in M. edulis, intermediate in M. galloprovincialis, and highest in M. trossulus, while introgression was positively associated with heterozygosity in M. edulis but negatively associated with heterozy- gosity in M. galloprovincialis. Our study will help to inform mussel aquaculture by providing baseline information on the genomic backgrounds of different Mytilus pop- ulations across Europe and by elucidating the effects of introgression on genome- wide heterozygosity, which is known to influence commercially important traits such as growth, viability, and fecundity in mussels

Description: This paper was initiated by a multidisciplinary Topic Workshop in the frame of the Deutsche Forschungsgemeinschaft Priority Program 1158 “Antarctic Research with Comparative Investigations in Arctic Ice Areas”, and hence it represents only the national view without claiming to be complete but is intended to provide awareness and suggestions for the current discussion on so-called big data in many scientific fields. The importance of the polar regions and their essential role for the Earth system are both undoubtedly recognized. However, dramatic changes in the climate and environment have been observed first in the Arctic and later in Antarctica over the past few decades. While important data have been collected and observation networks have been built in Antarctica and the Southern Ocean, this is a relatively data-scarce region due to the challenges of remote data acquisition, expensive labor, and harsh environmental conditions. There are many approaches crossing multiple scientific disciplines to better understand Antarctic processes; to evaluate ongoing climatic and environmental changes and their manifold ecological, physical, chemical, and geological consequences; and to make (improved) predictions. Together, these approaches generate very large, multivariate data sets, which can be broadly classified as “Antarctic big data”. For these large data sets, there is a pressing need for improved data acquisition, curation, integration, service, and application to support fundamental scientific research. Based on deficiencies in crossing disciplines and to attract further interest in big data in Antarctic sciences, this article will (i) describe and evaluate the current status of big data in various Antarctic-related scientific disciplines, (ii) identify current gaps, (iii) and provide solutions to fill these gaps. How to cite. Graiff, A., Braun, M., Driemel, A., Ebbing, J., Grossart, H.-P., Harder, T., Hoffman, J. I., Koch, B., Leese, F., Piontek, J., Scheinert, M., Quillfeldt, P., Zimmermann, J., and Karsten, U.: Big data in Antarctic sciences – current status, gaps, and future perspectives, Polarforschung, 91, 45–57, https://doi.org/10.5194/polf-91-45-2023, 2023. Received: 19 Dec 2022 – Revised: 01 Aug 2023 – Accepted: 04 Aug 2023 – Published: 04 Sep 2023

Description: Most molluscs possess shells, constructed from a vast array of microstructures and architectures. The fully formed shell is composed of calcite or aragonite. These CaCO3 crystals form complex biocomposites with proteins, which although typically less than 5% of total shell mass, play significant roles in determining shell microstructure. Despite much research effort, large knowledge gaps remain in how molluscs construct and maintain their shells, and how they produce such a great diversity of forms. Here we synthesize results on how shell shape, microstructure, composition and organic content vary among, and within, species in response to numerous biotic and abiotic factors. At the local level, temperature, food supply and predation cues significantly affect shell morphology, whilst salinity has a much stronger influence across latitudes. Moreover, we emphasize how advances in genomic technologies [e.g. restriction site-associated DNA sequencing (RAD-Seq) and epigenetics] allow detailed examinations of whether morphological changes result from phenotypic plasticity or genetic adaptation, or a combination of these. RAD-Seq has already identified single nucleotide polymorphisms associated with temperature and aquaculture practices, whilst epigenetic processes have been shown significantly to modify shell construction to local conditions in, for example, Antarctica and New Zealand. We also synthesize results on the costs of shell construction and explore how these affect energetic trade-offs in animal metabolism. The cellular costs are still debated, with CaCO3 precipitation estimates ranging from 1–2 J/mg to 17–55 J/mg depending on experimental and environmental conditions. However, organic components are more expensive (~29 J/mg) and recent data indicate transmembrane calcium ion transporters can involve considerable costs. This review emphasizes the role that molecular analyses have played in demonstrating multiple evolutionary origins of biomineralization genes. Although these are characterized by lineage-specific proteins and unique combinations of co-opted genes, a small set of protein domains have been identified as a conserved biomineralization tool box. We further highlight the use of sequence data sets in providing candidate genes for in situ localization and protein function studies. The former has elucidated gene expression modularity in mantle tissue, improving understanding of the diversity of shell morphology synthesis. RNA interference (RNAi) and clustered regularly interspersed short palindromic repeats - CRISPR-associated protein 9 (CRISPR-Cas9) experiments have provided proof of concept for use in the functional investigation of mollusc gene sequences, showing for example that Pif (aragonite-binding) protein plays a significant role in structured nacre crystal growth and that the Lsdia1 gene sets shell chirality in Lymnaea stagnalis. Much research has focused on the impacts of ocean acidification on molluscs. Initial studies were predominantly pessimistic for future molluscan biodiversity. However, more sophisticated experiments incorporating selective breeding and multiple generations are identifying subtle effects and that variability within mollusc genomes has potential for adaption to future conditions. Furthermore, we highlight recent historical studies based on museum collections that demonstrate a greater resilience of molluscs to climate change compared with experimental data. The future of mollusc research lies not solely with ecological investigations into biodiversity, and this review synthesizes knowledge across disciplines to understand biomineralization. It spans research ranging from evolution and development, through predictions of biodiversity prospects and future-proofing of aquaculture to identifying new biomimetic opportunities and societal benefits from recycling shell products.