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  • 1
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    JRA-55 based surface dataset for driving ocean–sea-ice models (JRA55-do) (2018)
    Elsevier
    In:  Ocean Modelling, 130 . pp. 79-139.
    Details
    Publication Date: 2021-02-08
    Description: We present a new surface-atmospheric dataset for driving ocean–sea-ice models based on Japanese 55-year atmospheric reanalysis (JRA-55), referred to here as JRA55-do. The JRA55-do dataset aims to replace the CORE interannual forcing version 2 (hereafter called the CORE dataset), which is currently used in the framework of the Coordinated Ocean-ice Reference Experiments (COREs) and the Ocean Model Intercomparison Project (OMIP). A major improvement in JRA55-do is the refined horizontal grid spacing (∼ 55 km) and temporal interval (3 hr). The data production method for JRA55-do essentially follows that of the CORE dataset, whereby the surface fields from an atmospheric reanalysis are adjusted relative to reference datasets. To improve the adjustment method, we use high-quality products derived from satellites and from several other atmospheric reanalysis projects, as well as feedback on the CORE dataset from the ocean modelling community. Notably, the surface air temperature and specific humidity are adjusted using multi-reanalysis ensemble means. In JRA55-do, the downwelling radiative fluxes and precipitation, which are affected by an ambiguous cloud parameterisation employed in the atmospheric model used for the reanalysis, are based on the reanalysis products. This approach represents a notable change from the CORE dataset, which imported independent observational products. Consequently, the JRA55-do dataset is more self-contained than the CORE dataset, and thus can be continually updated in near real-time. The JRA55-do dataset extends from 1958 to the present, with updates expected at least annually. This paper details the adjustments to the original JRA-55 fields, the scientific rationale for these adjustments, and the evaluation of JRA55-do. The adjustments successfully corrected the biases in the original JRA-55 fields. The globally averaged features are similar between the JRA55-do and CORE datasets, implying that JRA55-do can suitably replace the CORE dataset for use in driving global ocean–sea-ice models.
    Type: Article , PeerReviewed
    Format: text
    DOI: 10.1016/j.ocemod.2018.07.002
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    OceanRep: Article in a Scientific Journal - peer-reviewed
  • 2
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    OMIP contribution to CMIP6: experimental and diagnostic protocol for the physical component of the Ocean Model Intercomparison Project (2016)
    Copernicus Publications (EGU)
    In:  Geoscientific Model Development, 9 (9). pp. 3231-3296.
    Details
    Publication Date: 2019-02-01
    Description: The Ocean Model Intercomparison Project (OMIP) is an endorsed project in the Coupled Model Intercomparison Project Phase 6 (CMIP6). OMIP addresses CMIP6 science questions, investigating the origins and consequences of systematic model biases. It does so by providing a framework for evaluating (including assessment of systematic biases), understanding, and improving ocean, sea-ice, tracer, and biogeochemical components of climate and earth system models contributing to CMIP6. Among the WCRP Grand Challenges in climate science (GCs), OMIP primarily contributes to the regional sea level change and near-term (climate/decadal) prediction GCs. OMIP provides (a) an experimental protocol for global ocean/sea-ice models run with a prescribed atmospheric forcing; and (b) a protocol for ocean diagnostics to be saved as part of CMIP6. We focus here on the physical component of OMIP, with a companion paper (Orr et al., 2016) detailing methods for the inert chemistry and interactive biogeochemistry. The physical portion of the OMIP experimental protocol follows the interannual Coordinated Ocean-ice Reference Experiments (CORE-II). Since 2009, CORE-I (Normal Year Forcing) and CORE-II (Interannual Forcing) have become the standard methods to evaluate global ocean/sea-ice simulations and to examine mechanisms for forced ocean climate variability. The OMIP diagnostic protocol is relevant for any ocean model component of CMIP6, including the DECK (Diagnostic, Evaluation and Characterization of Klima experiments), historical simulations, FAFMIP (Flux Anomaly Forced MIP), C4MIP (Coupled Carbon Cycle Climate MIP), DAMIP (Detection and Attribution MIP), DCPP (Decadal Climate Prediction Project), ScenarioMIP, HighResMIP (High Resolution MIP), as well as the ocean/sea-ice OMIP simulations
    Type: Article , PeerReviewed
    Format: text
    DOI: 10.5194/gmd-9-3231-2016
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    OceanRep: Article in a Scientific Journal - peer-reviewed
  • 3
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    Challenges and Prospects in Ocean Circulation Models (2019)
    Frontiers
    In:  Frontiers in Marine Science, 6 . Art.Nr. 65.
    Details
    Publication Date: 2022-01-31
    Description: We revisit the challenges and prospects for ocean circulation models following Griffies et al. (2010). Over the past decade, ocean circulation models evolved through improved understanding, numerics, spatial discretization, grid configurations, parameterizations, data assimilation, environmental monitoring, and process-level observations and modeling. Important large scale applications over the last decade are simulations of the Southern Ocean, the Meridional Overturning Circulation and its variability, and regional sea level change. Submesoscale variability is now routinely resolved in process models and permitted in a few global models, and submesoscale effects are parameterized in most global models. The scales where nonhydrostatic effects become important are beginning to be resolved in regional and process models. Coupling to sea ice, ice shelves, and high-resolution atmospheric models has stimulated new ideas and driven improvements in numerics. Observations have provided insight into turbulence and mixing around the globe and its consequences are assessed through perturbed physics models. Relatedly, parameterizations of the mixing and overturning processes in boundary layers and the ocean interior have improved. New diagnostics being used for evaluating models alongside present and novel observations are briefly referenced. The overall goal is summarizing new developments in ocean modeling, including: how new and existing observations can be used, what modeling challenges remain, and how simulations can be used to support observations.
    Type: Article , PeerReviewed
    Format: text
    DOI: 10.3389/fmars.2019.00065
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    OceanRep: Article in a Scientific Journal - peer-reviewed
  • 4
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    Global Perspectives on Observing Ocean Boundary Current Systems (2019)
    Frontiers
    In:  Frontiers in Marine Science, 6 . Art.Nr. 423.
    Details
    Publication Date: 2022-01-31
    Description: Ocean boundary current systems are key components of the climate system, are home to highly productive ecosystems, and have numerous societal impacts. Establishment of a global network of boundary current observing systems is a critical part of ongoing development of the Global Ocean Observing System. The characteristics of boundary current systems are reviewed, focusing on scientific and societal motivations for sustained observing. Techniques currently used to observe boundary current systems are reviewed, followed by a census of the current state of boundary current observing systems globally. The next steps in the development of boundary current observing systems are considered, leading to several specific recommendations.
    Type: Article , PeerReviewed
    Format: text
    DOI: 10.3389/fmars.2019.00423
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    OceanRep: Article in a Scientific Journal - peer-reviewed
  • 5
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    JRA-55 based surface dataset for driving ocean–sea-ice models (JRA55-do) (2019)
    Details
    Publication Date: 2020-12-02
    Description: We present a new surface-atmospheric dataset for driving ocean–sea-ice models based on Japanese 55-year atmospheric reanalysis (JRA-55), referred to here as JRA55-do. The JRA55-do dataset aims to replace the CORE interannual forcing version 2 (hereafter called the CORE dataset), which is currently used in the framework of the Coordinated Ocean-ice Reference Experiments (COREs) and the Ocean Model Intercomparison Project (OMIP). A major improvement in JRA55-do is the refined horizontal grid spacing (∼ 55 km) and temporal interval (3 hr). The data production method for JRA55-do essentially follows that of the CORE dataset, whereby the surface fields from an atmospheric reanalysis are adjusted relative to reference datasets. To improve the adjustment method, we use high-quality products derived from satellites and from several other atmospheric reanalysis projects, as well as feedback on the CORE dataset from the ocean modelling community. Notably, the surface air temperature and specific humidity are adjusted using multi-reanalysis ensemble means. In JRA55-do, the downwelling radiative fluxes and precipitation, which are affected by an ambiguous cloud parameterisation employed in the atmospheric model used for the reanalysis, are based on the reanalysis products. This approach represents a notable change from the CORE dataset, which imported independent observational products. Consequently, the JRA55-do dataset is more self-contained than the CORE dataset, and thus can be continually updated in near real-time. The JRA55-do dataset extends from 1958 to the present, with updates expected at least annually. This paper details the adjustments to the original JRA-55 fields, the scientific rationale for these adjustments, and the evaluation of JRA55-do. The adjustments successfully corrected the biases in the original JRA-55 fields. The globally averaged features are similar between the JRA55-do and CORE datasets, implying that JRA55-do can suitably replace the CORE dataset for use in driving global ocean–sea-ice models.
    Description: Published
    Description: 79-139
    Description: 4A. Oceanografia e clima
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 6
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    Challenges and Prospects in Ocean Circulation Models (2020)
    Details
    Publication Date: 2020-03-12
    Description: We revisit the challenges and prospects for ocean circulation models following Griffies et al. (2010). Over the past decade, ocean circulation models evolved through improved understanding, numerics, spatial discretization, grid configurations, parameterizations, data assimilation, environmental monitoring, and process-level observations and modeling. Important large scale applications over the last decade are simulations of the Southern Ocean, the Meridional Overturning Circulation and its variability, and regional sea level change. Submesoscale variability is now routinely resolved in process models and permitted in a few global models, and submesoscale effects are parameterized in most global models. The scales where nonhydrostatic effects become important are beginning to be resolved in regional and process models. Coupling to sea ice, ice shelves, and high-resolution atmospheric models has stimulated new ideas and driven improvements in numerics. Observations have provided insight into turbulence and mixing around the globe and its consequences are assessed through perturbed physics models. Relatedly, parameterizations of the mixing and overturning processes in boundary layers and the ocean interior have improved. New diagnostics being used for evaluating models alongside present and novel observations are briefly referenced. The overall goal is summarizing new developments in ocean modeling, including: how new and existing observations can be used, what modeling challenges remain, and how simulations can be used to support observations
    Description: Published
    Description: Article 65
    Description: 4A. Oceanografia e clima
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 7
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    Interannual variability of the Mid-Atlantic bight cold pool (2020)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2020. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 125(8), (2020): e2020JC016445, doi:10.1029/2020JC016445.
    Description: The Mid‐Atlantic Bight (MAB) Cold Pool is a bottom‐trapped, cold (temperature below 10°C) and fresh (practical salinity below 34) water mass that is isolated from the surface by the seasonal thermocline and is located over the midshelf and outer shelf of the MAB. The interannual variability of the Cold Pool with regard to its persistence time, volume, temperature, and seasonal along‐shelf propagation is investigated based on a long‐term (1958–2007) high‐resolution regional model of the northwest Atlantic Ocean. A Cold Pool Index is defined and computed in order to quantify the strength of the Cold Pool on the interannual timescale. Anomalous strong, weak, and normal years are categorized and compared based on the Cold Pool Index. A detailed quantitative study of the volume‐averaged heat budget of the Cold Pool region (CPR) has been examined on the interannual timescale. Results suggest that the initial temperature and abnormal warming/cooling due to advection are the primary drivers in the interannual variability of the near‐bottom CPR temperature anomaly during stratified seasons. The long persistence of temperature anomalies from winter to summer in the CPR also suggests a potential for seasonal predictability.
    Description: This work was funded by the National Oceanic and Atmospheric Administration through Awards NOAA‐NA‐15OAR4310133 and NOAA‐NA‐13OAR4830233 and the National Science Foundation Awards OCE‐1049088, OCE‐1419584, and OCE‐0961545.
    Description: 2021-02-03
    Keywords: Mid‐Atlantic Bight ; Cold Pool ; continental shelf ; temperature balance ; interannual variability ; near‐bottom temperature
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 8
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    PICES Advisory Report on the decline of Fraser River sockeye salmon Oncorhynchus nerka (Steller, 1743) in relation to marine ecology (2021)
    North Pacific Marine Science Organization (PICES) | Sidney, British Columbia
    In:  http://aquaticcommons.org/id/eprint/21578 | 121 | 2017-09-28 19:50:26 | 21578 | North Pacific Marine Science Organization (PICES)
    Details
    Publication Date: 2021-07-15
    Description: In the spring of 2010, the Government of Canada invited PICES to participate in a Commission of Inquiry into the Decline of Sockeye Salmon in the Fraser River by considering how marine ecology may have affected their abundance. A major objective that was achieved in this report was to assemble, within an eight week period, as comprehensive a summary as was possible of what is known about Fraser River sockeye salmon (Oncorhynchus nerka) in the ocean. While much of this effort involved summarizing information published in data/technical reports and the primary literature, where necessary, original data have been re-examined and new analyses conducted to fulfill the terms of the Statement of Work. The compilation provides a background of knowledge against which to judge what can be known regarding the two major questions posed by the Cohen Commission to PICES:-Can the decline in Fraser River sockeye in 2009 be explained by the conditions the fish experienced in the marine environment?-Is there any evidence for declines in marine productivity or changes in Fraser River sockeye distribution that can be associated with the 15-year gradual decrease in Fraser River sockeye productivity?
    Keywords: Ecology ; Environment ; Fisheries ; Oceanography ; advisory report ; Fraser River ; sockeye salmon ; Cohen Commission ; sockeye decline
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
    Format: 149
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  • 9
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    Global perspectives on observing ocean boundary current systems (2019)
    Frontiers Media
    Details
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Todd, R. E., Chavez, F. P., Clayton, S., Cravatte, S., Goes, M., Greco, M., Ling, X., Sprintall, J., Zilberman, N., V., Archer, M., Aristegui, J., Balmaseda, M., Bane, J. M., Baringer, M. O., Barth, J. A., Beal, L. M., Brandt, P., Calil, P. H. R., Campos, E., Centurioni, L. R., Chidichimo, M. P., Cirano, M., Cronin, M. F., Curchitser, E. N., Davis, R. E., Dengler, M., deYoung, B., Dong, S., Escribano, R., Fassbender, A. J., Fawcett, S. E., Feng, M., Goni, G. J., Gray, A. R., Gutierrez, D., Hebert, D., Hummels, R., Ito, S., Krug, M., Lacan, F., Laurindo, L., Lazar, A., Lee, C. M., Lengaigne, M., Levine, N. M., Middleton, J., Montes, I., Muglia, M., Nagai, T., Palevsky, H., I., Palter, J. B., Phillips, H. E., Piola, A., Plueddemann, A. J., Qiu, B., Rodrigues, R. R., Roughan, M., Rudnick, D. L., Rykaczewski, R. R., Saraceno, M., Seim, H., Sen Gupta, A., Shannon, L., Sloyan, B. M., Sutton, A. J., Thompson, L., van der Plas, A. K., Volkov, D., Wilkin, J., Zhang, D., & Zhang, L. Global perspectives on observing ocean boundary current systems. Frontiers in Marine Science, 6, (2010); 423, doi: 10.3389/fmars.2019.00423.
    Description: Ocean boundary current systems are key components of the climate system, are home to highly productive ecosystems, and have numerous societal impacts. Establishment of a global network of boundary current observing systems is a critical part of ongoing development of the Global Ocean Observing System. The characteristics of boundary current systems are reviewed, focusing on scientific and societal motivations for sustained observing. Techniques currently used to observe boundary current systems are reviewed, followed by a census of the current state of boundary current observing systems globally. The next steps in the development of boundary current observing systems are considered, leading to several specific recommendations.
    Description: RT was supported by The Andrew W. Mellon Foundation Endowed Fund for Innovative Research at WHOI. FC was supported by the David and Lucile Packard Foundation. MGo was funded by NSF and NOAA/AOML. XL was funded by China’s National Key Research and Development Projects (2016YFA0601803), the National Natural Science Foundation of China (41490641, 41521091, and U1606402), and the Qingdao National Laboratory for Marine Science and Technology (2017ASKJ01). JS was supported by NOAA’s Global Ocean Monitoring and Observing Program (Award NA15OAR4320071). DZ was partially funded by the Joint Institute for the Study of the Atmosphere and Ocean (JISAO) under NOAA Cooperative Agreement NA15OAR4320063. BS was supported by IMOS and CSIRO’s Decadal Climate Forecasting Project. We gratefully acknowledge the wide range of funding sources from many nations that have enabled the observations and analyses reviewed here.
    Keywords: Western boundary current systems ; Eastern boundary current systems ; Ocean observing systems ; Time series ; Autonomous underwater gliders ; Drifters ; Remote sensing ; Moorings
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 10
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    Projected effects of climate change on Pseudo-nitzschia bloom dynamics in the Gulf of Maine (2022)
    Elsevier
    Details
    Publication Date: 2022-07-20
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Clark, S., Hubbard, K., Ralston, D., McGillicuddy, D., Stock, C., Alexander, M., & Curchitser, E. Projected effects of climate change on Pseudo-nitzschia bloom dynamics in the Gulf of Maine. Journal of Marine Systems, 230, (2022): 103737, https://doi.org/10.1016/j.jmarsys.2022.103737.
    Description: Worldwide, warming ocean temperatures have contributed to extreme harmful algal bloom events and shifts in phytoplankton species composition. In 2016 in the Gulf of Maine (GOM), an unprecedented Pseudo-nitzschia bloom led to the first domoic-acid induced shellfishery closures in the region. Potential links between climate change, warming temperatures, and the GOM Pseudo-nitzschia assemblage, however, remain unexplored. In this study, a global climate change projection previously downscaled to 7-km resolution for the Northwest Atlantic was further refined with a 1–3-km resolution simulation of the GOM to investigate the effects of climate change on HAB dynamics. A 25-year time slice of projected conditions at the end of the 21st century (2073–2097) was compared to a 25-year hindcast of contemporary ocean conditions (1994–2018) and analyzed for changes to GOM inflows, transport, and Pseudo-nitzschia australis growth potential. On average, climate change is predicted to lead to increased temperatures, decreased salinity, and increased stratification in the GOM, with the largest changes occurring in the late summer. Inflows from the Scotian Shelf are projected to increase, and alongshore transport in the Eastern Maine Coastal Current is projected to intensify. Increasing ocean temperatures will likely make P. australis growth conditions less favorable in the southern and western GOM but improve P. australis growth conditions in the eastern GOM, including a later growing season in the fall, and a longer growing season in the spring. Combined, these changes suggest that P. australis blooms in the eastern GOM could intensify in the 21st century, and that the overall Pseudo-nitzschia species assemblage might shift to warmer-adapted species such as P. plurisecta or other Pseudo-nitzschia species that may be introduced.
    Description: This research was funded by the National Science Foundation (Grant Number OCE-1840381), the National Institute of Environmental Health Sciences (Grant Number 1P01ES028938), the Woods Hole Center for Oceans and Human Health, and the Academic Programs Office of the Woods Hole Oceanographic Institution.
    Keywords: Gulf of Maine ; ROMS ; Pseudo-nitzschia ; Climate change ; Harmful algal blooms
    Repository Name: Woods Hole Open Access Server
    Type: Article
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