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  • American Geophysical Union  (4)
  • Copernicus Publications on behalf of the European Geosciences Union  (1)
  • 1
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 112 (2007): C05017, doi:10.1029/2006JC003731.
    Description: An ecosystem model embedded in a global ocean general circulation model is used to quantify roles of biological and physical processes on seasonal oxygen variations. We find that the thermally induced seasonal net outgassing (SNO) of oxygen is overestimated by about 30% if gas phase equilibrium is assumed, and we find that seasonal variations in thermocline oxygen due to biology are approximated well using the oxygen anomaly. Outside the tropics and the north Indian Ocean, biological SNO is, on average, 56% of net community production (defined as net oxygen production above 76 m) during the outgassing period and 35% of annual net community production. In the same region the seasonal drawdown of the oxygen anomaly within the upper thermocline (76–500 m) is 76% of the remineralization during the drawdown and 48% of annual remineralization. Applying model-derived relationships to observed O2 climatologies and using independent estimates for tropical and monsoonal systems, we estimate global net community production to be 14.9 ± 2.5 Pg C yr−1.
    Description: R.N., X.J., and F.L. were supported from the following grants: NOAA NA16GP2987, NASA NAG5-6451, and NSF OCE-9711937.
    Keywords: New production ; Remineralization ; Dissolved oxygen
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 2
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 21 (2007): GB3007, doi:10.1029/2006GB002857.
    Description: Results are presented of export production, dissolved organic matter (DOM) and dissolved oxygen simulated by 12 global ocean models participating in the second phase of the Ocean Carbon-cycle Model Intercomparison Project. A common, simple biogeochemical model is utilized in different coarse-resolution ocean circulation models. The model mean (±1σ) downward flux of organic matter across 75 m depth is 17 ± 6 Pg C yr−1. Model means of globally averaged particle export, the fraction of total export in dissolved form, surface semilabile dissolved organic carbon (DOC), and seasonal net outgassing (SNO) of oxygen are in good agreement with observation-based estimates, but particle export and surface DOC are too high in the tropics. There is a high sensitivity of the results to circulation, as evidenced by (1) the correlation of surface DOC and export with circulation metrics, including chlorofluorocarbon inventory and deep-ocean radiocarbon, (2) very large intermodel differences in Southern Ocean export, and (3) greater export production, fraction of export as DOM, and SNO in models with explicit mixed layer physics. However, deep-ocean oxygen, which varies widely among the models, is poorly correlated with other model indices. Cross-model means of several biogeochemical metrics show better agreement with observation-based estimates when restricted to those models that best simulate deep-ocean radiocarbon. Overall, the results emphasize the importance of physical processes in marine biogeochemical modeling and suggest that the development of circulation models can be accelerated by evaluating them with marine biogeochemical metrics.
    Description: R. G. N. and J. L. S. acknowledge the support of NASA grants NAG5-6451 and NAG5-6591, respectively, as part of the JGOFS Synthesis and Modeling Program. G. K. P. and F. J. acknowledge support by the Swiss National Science Foundation. European contributions were supported by the EU GOSAC Project (ENV4-CT97- 0495).
    Keywords: Export production ; Numerical modeling ; Ocean circulation
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 3
    Publication Date: 2022-05-25
    Description: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Geoscientific Model Development 10 (2017): 2169-2199, doi:10.5194/gmd-10-2169-2017.
    Description: The Ocean Model Intercomparison Project (OMIP) focuses on the physics and biogeochemistry of the ocean component of Earth system models participating in the sixth phase of the Coupled Model Intercomparison Project (CMIP6). OMIP aims to provide standard protocols and diagnostics for ocean models, while offering a forum to promote their common assessment and improvement. It also offers to compare solutions of the same ocean models when forced with reanalysis data (OMIP simulations) vs. when integrated within fully coupled Earth system models (CMIP6). Here we detail simulation protocols and diagnostics for OMIP's biogeochemical and inert chemical tracers. These passive-tracer simulations will be coupled to ocean circulation models, initialized with observational data or output from a model spin-up, and forced by repeating the 1948–2009 surface fluxes of heat, fresh water, and momentum. These so-called OMIP-BGC simulations include three inert chemical tracers (CFC-11, CFC-12, SF6) and biogeochemical tracers (e.g., dissolved inorganic carbon, carbon isotopes, alkalinity, nutrients, and oxygen). Modelers will use their preferred prognostic BGC model but should follow common guidelines for gas exchange and carbonate chemistry. Simulations include both natural and total carbon tracers. The required forced simulation (omip1) will be initialized with gridded observational climatologies. An optional forced simulation (omip1-spunup) will be initialized instead with BGC fields from a long model spin-up, preferably for 2000 years or more, and forced by repeating the same 62-year meteorological forcing. That optional run will also include abiotic tracers of total dissolved inorganic carbon and radiocarbon, CTabio and 14CTabio, to assess deep-ocean ventilation and distinguish the role of physics vs. biology. These simulations will be forced by observed atmospheric histories of the three inert gases and CO2 as well as carbon isotope ratios of CO2. OMIP-BGC simulation protocols are founded on those from previous phases of the Ocean Carbon-Cycle Model Intercomparison Project. They have been merged and updated to reflect improvements concerning gas exchange, carbonate chemistry, and new data for initial conditions and atmospheric gas histories. Code is provided to facilitate their implementation.
    Description: J. C. Orr and L. Bopp were supported by the EU H2020 CRESCENDO project (grant 641816). J. L. Bullister was supported by the NOAA Climate Program Office H. Graven was supported by an EU Marie Curie Career Integration Grant. A. Mouchet benefited from an EU H2020 Marie Curie project (grant 660893). R. G. Najjar was supported by NASA’s Ocean Biology and Biogeochemistry Program and NASA’s Interdisciplinary Science Program. F. Joos was supported by the Swiss National Science Foundation.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 4
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2004. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 31 (2004): L07303, doi:10.1029/2003GL018970.
    Description: New radiocarbon and chlorofluorocarbon-11 data from the World Ocean Circulation Experiment are used to assess a suite of 19 ocean carbon cycle models. We use the distributions and inventories of these tracers as quantitative metrics of model skill and find that only about a quarter of the suite is consistent with the new data-based metrics. This should serve as a warning bell to the larger community that not all is well with current generation of ocean carbon cycle models. At the same time, this highlights the danger in simply using the available models to represent the state-of-the-art modeling without considering the credibility of each model.
    Description: K. Matsumoto was supported by NSF grants OCE-9819144 and OCE0097316.
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 5
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2004. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 18 (2004): GB3017, doi:10.1029/2003GB002150.
    Description: A suite of standard ocean hydrographic and circulation metrics are applied to the equilibrium physical solutions from 13 global carbon models participating in phase 2 of the Ocean Carbon-cycle Model Intercomparison Project (OCMIP-2). Model-data comparisons are presented for sea surface temperature and salinity, seasonal mixed layer depth, meridional heat and freshwater transport, 3-D hydrographic fields, and meridional overturning. Considerable variation exists among the OCMIP-2 simulations, with some of the solutions falling noticeably outside available observational constraints. For some cases, model-model and model-data differences can be related to variations in surface forcing, subgrid-scale parameterizations, and model architecture. These errors in the physical metrics point to significant problems in the underlying model representations of ocean transport and dynamics, problems that directly affect the OCMIP predicted ocean tracer and carbon cycle variables (e.g., air-sea CO2 flux, chlorofluorocarbon and anthropogenic CO2 uptake, and export production). A substantial fraction of the large model-model ranges in OCMIP-2 biogeochemical fields (±25–40%) represents the propagation of known errors in model physics. Therefore the model-model spread likely overstates the uncertainty in our current understanding of the ocean carbon system, particularly for transport-dominated fields such as the historical uptake of anthropogenic CO2. A full error assessment, however, would need to account for additional sources of uncertainty such as more complex biological-chemical-physical interactions, biases arising from poorly resolved or neglected physical processes, and climate change.
    Description: S. Doney and K. Lindsay acknowledge support from NASA through the U.S. OCMIP program and the U.S. JGOFS Synthesis and Modeling Project (NASA grant W-19,274). The National Center for Atmospheric Research is sponsored by the National Science Foundation. N. Gruber acknowledges support from NASA grant OCEAN- 0250-0231. F. Joos and G.-K. Plattner acknowledge support by the Swiss National Science Foundation and the Swiss Federal Office of Science and Education through the EU-projects GOSAC and MilECLim and enjoyed scientific advice by T. F. Stocker, G. Delaygue, R. Knutti, and O. Marchal. European model contributions were supported by the EU GOSAC project (contract ENV4-CT97-0495). We also acknowledge support from IGBP/ GAIM to maintain the OCMIP project.
    Keywords: Global carbon models ; Ocean carbon systems ; OCMIP-2
    Repository Name: Woods Hole Open Access Server
    Type: Article
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