Description: Ocean color satellite measurements in the Gulf of Mexico open waters evidenced a clear seasonal variability in the surface chlorophyll concentration. Recent investigations in subtropical oligotrophic regions suggested that the surface chlorophyll increase may not be systematically associated to a real biomass increase but may result from physiological mechanisms. This finding may be relevant in the Gulf of Mexico as suggested by bio-optical measurements recently acquired by APEX profiling floats. Despite the increasing amount of observations in the Gulf of Mexico open waters, data are still lacking to regionalize the seasonal and interannual variability of the chlorophyll vertical structure or to investigate how the energetic mesoscale dynamics within the Gulf of Mexico modulate the chlorophyll distribution. To overcome these limitations, we set up an eddy resolving (1/12deg) coupled bio-physical model (NEMO-PISCES) of the Gulf of Mexico. The use of recent sets of observations allowed for a careful evaluation of the vertical distribution of the nutrient and chlorophyll concentrations throughout the different seasons. The analysis of the seasonal variability of the integrated chlorophyll content revealed a much more contrasted and complex behavior than the basin scale homogeneous pattern of variability inferred from modeled and observed surface chlorophyll concentration. We show that the variability of the mixed-layer depth strongly shape the seasonal distribution of the chlorophyll concentration but also its year to year variability. Finally, we investigate some of the physical-biogeochemical coupling processes specific to GoM sub-regions and mesoscale dynamics (in particular the Loop Current and Loop Current eddies).

Description: A systematic study of Benguela Nino and Benguela Nina events during 1958 to 2015 including those that developed before the satellite era (1982) is carried out using an ocean general circulation model in combination with a linear equatorial model. Altogether, 21 strong warm and cold anomalous coastal events are identified among which 6 undocumented extreme coastal events are reported. Results suggest that most of these extreme coastal events including the newly identified ones are linked to remote equatorial forcing via mode 2 equatorial Kelvin waves. The latter propagates after approaching the African coast poleward as coastally trapped waves leading surface temperature anomalies along the Angola-Benguela current system by one month. One to two months before the peak of Benguela Ninos or Ninas usually occurring in March-April, a large-scale wind stress forcing is observed with both local (variations of alongshore coastal wind stress) and remote forcing developing simultaneously. Results further suggest that surface temperature anomalies off Southern Angola and in the Angola-Benguela Front are associated with equatorial dynamics and meridional wind stress fluctuations off the southwestern African coast north of 15 degrees S. Similar mechanisms are observed for Northern Namibia in combination with forcing by local meridional wind stress variations. Plain Language Summary The Benguela upwelling system located in the southeastern Atlantic Ocean supports a large marine ecosystem due to upwelling conditions. Every few years, anomalous warm and cold coastal events occur in the southeastern Atlantic and are detrimental for Angola, Namibia, and South Africa, as they affect fisheries and rainfall like El Nino phenomenon in the Pacific. To study these coastal events from 1958 to 2015, we use the output from a tropical Atlantic simulation in combination with the solution of a simple linear equatorial model. We study the anomalous coastal events including the ones that occurred before the satellite era (before 1982) and examine the role of the local wind forcing and the remote forcing associated with equatorial variability. We describe so far undocumented extreme events occurring from 1958 to 2015. Results suggest that most of the extreme coastal warm and cold events are associated with the propagation of equatorial Kelvin waves along the equatorial waveguide which trigger poleward-propagating coastal trapped waves along the southwestern African coast. One to two months before the peak season (usually March-April) of the anomalous coastal events, a large-scale wind pattern is observed, encompassing both variations of alongshore coastal wind in the southeastern Atlantic and zonal wind along the equatorial Atlantic.

Description: The seasonal and interannual variability of chlorophyll in the Gulf of Mexico open waters is studied using a three‐dimensional coupled physical‐biogeochemical model. A 5 years hindcast driven by realistic open‐boundary conditions, atmospheric forcings, and freshwater discharges from rivers is performed. The use of recent in situ observations allowed an in‐depth evaluation of the model nutrient and chlorophyll seasonal distributions, including the chlorophyll vertical structure. We find that different chlorophyll patterns of temporal variability coexist in the deep basin which thereby cannot be considered as a homogeneous region with respect to chlorophyll dynamics. A partitioning of the Gulf of Mexico open waters based on the winter chlorophyll concentration increase is then proposed. This partition is basically explained by the amount of nutrients injected into the euphotic layer which is highly constrained by the dynamic of the winter mixed layer. The seasonal and interannual variability appears to be affected by the variability of atmospheric fluxes and mesoscale dynamics (Loop Current eddies in particular). Finally, estimates of primary production in the deep basin are provided.

Description: In this paper, we review observational and modelling results on the upwelling in the tropical Atlantic between 10∘ N and 20∘ S. We focus on the physical processes that drive the seasonal variability of surface cooling and the upward nutrient flux required to explain the seasonality of biological productivity. We separately consider the equatorial upwelling system, the coastal upwelling system of the Gulf of Guinea and the tropical Angolan upwelling system. All three tropical Atlantic upwelling systems have in common a strong seasonal cycle, with peak biological productivity during boreal summer. However, the physical processes driving the upwelling vary between the three systems. For the equatorial regime, we discuss the wind forcing of upwelling velocity and turbulent mixing, as well as the underlying dynamics responsible for thermocline movements and current structure. The coastal upwelling system in the Gulf of Guinea is located along its northern boundary and is driven by both local and remote forcing. Particular emphasis is placed on the Guinea Current, its separation from the coast and the shape of the coastline. For the tropical Angolan upwelling, we show that this system is not driven by local winds but instead results from the combined effect of coastally trapped waves, surface heat and freshwater fluxes, and turbulent mixing. Finally, we review recent changes in the upwelling systems associated with climate variability and global warming and address possible responses of upwelling systems in future scenarios.

Description: Surface chlorophyll concentrations inferred from satellite images suggest a strong influence of the mesoscale activity on biogeochemical variability within the oligotrophic regions of the Gulf of Mexico (GoM). More specifically, long-living anticyclonic Loop Current Eddies (LCEs) are shed episodically from the Yucatan Chanel and propagate westward. This study addresses the biogeochemical response of the LCEs to seasonal forcing and show their role in driving phytoplankton biomass distribution in the GoM. Using an eddy resolving (1/12°) interannual regional simulation based on the coupled physical-biogeochemical model NEMO-PISCES that yields a realistic representation of the surface chlorophyll distribution, it is shown that the LCEs foster a large biomass increase in winter in the upper ocean. The primary production in the LCEs is larger than the average rate in the surrounding open waters of the GoM. This behavior cannot be directly identified from surface chlorophyll distribution alone since LCEs are associated with a negative surface chlorophyll anomaly all year long. This anomalous biomass increase in the LCEs is explained by the mixed-layer response to winter convective mixing that reaches deeper and nutrient-richer waters.

Description: In this study, we use a joint observation-model approachto investigate the mixed-layer heat and salt annual mean as well as seasonalbudgets in the eastern tropical Atlantic. The regional PREFCLIM (PREFACE Climatology)observational climatology provides the budget terms with a relatively lowspatial and temporal resolution compared to the online NEMO (Nucleus for European Modelingof the Ocean; Madec, G., 2014) model, and thisis later resampled as in PREFCLIM climatology. In addition, advectionterms are recomputed offline from the model as PREFCLIM gridded advectioncomputation. In the Senegal, Angola, and Benguela regions, the seasonal cycle ofmixed-layer temperature is mainly governed by surface heat fluxes; however,it is essentially driven by vertical heat diffusion in the equatorial region.The seasonal cycle of mixed-layer salinity is largely controlled byfreshwater flux in the Senegal and Benguela regions; however, it follows thevariability of zonal and meridional salt advection in the equatorial and Angolaregions, respectively. Our results show that the time-averaged spatialdistribution of NEMO offline heat and salt advection terms compares much betterto PREFCLIM horizontal advection terms than the online heat and salt advectionterms. However, the seasonal cycle of horizontal advection in selectedregions shows that NEMO offline terms do not always compare well withPREFCLIM, sometimes less than online terms. Despite this difference, theseresults suggest the important role of small-scale variability in mixed-layerheat and salt budgets.