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  • 1
    Publication Date: 2022-10-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Bracco, A., Paris, C. B., Esbaugh, A. J., Frasier, K., Joye, S. B., Liu, G., Polzin, K. L., & Vaz, A. C. Transport, fate and impacts of the deep plume of petroleum hydrocarbons formed during the Macondo blowout. Frontiers in Marine Science, 7, (2020): 542147, doi:10.3389/fmars.2020.542147.
    Description: The 2010 Macondo oil well blowout consisted in a localized, intense infusion of petroleum hydrocarbons to the deep waters of the Gulf of Mexico. A substantial amount of these hydrocarbons did not reach the ocean surface but remained confined at depth within subsurface plumes, the largest and deepest of which was found at ∼ 1000–1200 m of depth, along the continental slope (the deep plume). This review outlines the challenges the science community overcame since 2010, the discoveries and the remaining open questions in interpreting and predicting the distribution, fate and impact of the Macondo oil entrained in the deep plume. In the past 10 years, the scientific community supported by the Gulf of Mexico Research Initiative (GoMRI) and others, has achieved key milestones in observing, conceptualizing and understanding the physical oceanography of the Gulf of Mexico along its northern continental shelf and slope. Major progress has been made in modeling the transport, evolution and degradation of hydrocarbons. Here we review this new knowledge and modeling tools, how our understanding of the deep plume formation and evolution has evolved, and how research in the past decade may help preparing the scientific community in the event of a future spill in the Gulf or elsewhere. We also summarize briefly current knowledge of the plume fate – in terms of microbial degradation and geochemistry – and impacts on fish, deep corals and mammals. Finally, we discuss observational, theoretical, and modeling limitations that constrain our ability to predict the three-dimensional movement of waters in this basin and the fate and impacts of the hydrocarbons they may carry, and we discuss research priorities to overcome them.
    Description: This review was made possible by funding from the Gulf of Mexico Research Initiative (GoMRI) and is a product of the Core Area 1 Synthesis workshop. The authors have contributed research on the Gulf deep circulation and the deep plume through GoMRI-funded consortia (ECOGIG for AB, SJ and GL, C-IMAGE for CP, AV and KF, and RECOVER for AE) and one of the RFP-5 grant (KP). KP was partially supported also by NSF OCE-1536779.
    Keywords: Deepwater Horizon ; Deepwater plume ; Ocean modeling ; Oil modeling ; Transport and mixing processes ; Active tracer
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2022-05-26
    Description: Dataset: AT42-05 Sediment geochemistry
    Description: Sediment geochemistry from push cores obtained using the human-occupied deep-diving vehicle (HOV) Alvin dives 4991-5000 during the R/V Atlantis cruise AT42-05 in Guaymas Basin, Gulf of California (27 00.00 N, -111 20.00 W) in November 2018. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/817797
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1357360
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2022-10-26
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Teske, A., Wegener, G., Chanton, J. P., White, D., MacGregor, B., Hoer, D., de Beer, D., Zhuang, G., Saxton, M. A., Joye, S. B., Lizarralde, D., Soule, S. A., & Ruff, S. E. Microbial communities under distinct thermal and geochemical regimes in axial and off-axis sediments of Guaymas Basin. Frontiers in Microbiology, 12, (2021): 633649, https://doi.org/10.3389/fmicb.2021.633649.
    Description: Cold seeps and hydrothermal vents are seafloor habitats fueled by subsurface energy sources. Both habitat types coexist in Guaymas Basin in the Gulf of California, providing an opportunity to compare microbial communities with distinct physiologies adapted to different thermal regimes. Hydrothermally active sites in the southern Guaymas Basin axial valley, and cold seep sites at Octopus Mound, a carbonate mound with abundant methanotrophic cold seep fauna at the Central Seep location on the northern off-axis flanking regions, show consistent geochemical and microbial differences between hot, temperate, cold seep, and background sites. The changing microbial actors include autotrophic and heterotrophic bacterial and archaeal lineages that catalyze sulfur, nitrogen, and methane cycling, organic matter degradation, and hydrocarbon oxidation. Thermal, biogeochemical, and microbiological characteristics of the sampling locations indicate that sediment thermal regime and seep-derived or hydrothermal energy sources structure the microbial communities at the sediment surface.
    Description: Research on Guaymas Basin in the Teske lab is supported by NSF Molecular and cellular Biology grant 1817381 “Collaborative Research: Next generation physiology: a systems-level understanding of microbes driving carbon cycling in marine sediments”. Sampling in Guaymas Basin was supported by collaborative NSF Biological Oceanography grants 1357238 and 1357360 “Collaborative Research: Microbial carbon cycling and its interaction with sulfur and nitrogen transformations in Guaymas Basin hydrothermal sediments” to AT and SJ, respectively. SER was supported by an AITF/Eyes High Postdoctoral Fellowship and start-up funds provided by the Marine Biological Laboratory.
    Keywords: Cold seep ; Hydrothermal sediment ; Porewater profiles ; Bacteria, archaea ; Guaymas Basin
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 4
    Publication Date: 2022-06-06
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ramirez, G. A., Mara, P., Sehein, T., Wegener, G., Chambers, C. R., Joye, S. B., Peterson, R. N., Philippe, A., Burgaud, G., Edgcomb, V. P., & Teske, A. P. Environmental factors shaping bacterial, archaeal and fungal community structure in hydrothermal sediments of Guaymas Basin, Gulf of California. Plos One, 16(9), (2021): e0256321, https://doi.org/10.1371/journal.pone.0256321.
    Description: The flanking regions of Guaymas Basin, a young marginal rift basin located in the Gulf of California, are covered with thick sediment layers that are hydrothermally altered due to magmatic intrusions. To explore environmental controls on microbial community structure in this complex environment, we analyzed site- and depth-related patterns of microbial community composition (bacteria, archaea, and fungi) in hydrothermally influenced sediments with different thermal conditions, geochemical regimes, and extent of microbial mats. We compared communities in hot hydrothermal sediments (75-100°C at ~40 cm depth) covered by orange-pigmented Beggiatoaceae mats in the Cathedral Hill area, temperate sediments (25-30°C at ~40 cm depth) covered by yellow sulfur precipitates and filamentous sulfur oxidizers at the Aceto Balsamico location, hot sediments (〉115°C at ~40 cm depth) with orange-pigmented mats surrounded by yellow and white mats at the Marker 14 location, and background, non-hydrothermal sediments (3.8°C at ~45 cm depth) overlain with ambient seawater. Whereas bacterial and archaeal communities are clearly structured by site-specific in-situ thermal gradients and geochemical conditions, fungal communities are generally structured by sediment depth. Unexpectedly, chytrid sequence biosignatures are ubiquitous in surficial sediments whereas deeper sediments contain diverse yeasts and filamentous fungi. In correlation analyses across different sites and sediment depths, fungal phylotypes correlate to each other to a much greater degree than Bacteria and Archaea do to each other or to fungi, further substantiating that site-specific in-situ thermal gradients and geochemical conditions that control bacteria and archaea do not extend to fungi.
    Description: This project was supported by collaborative NSF Biological Oceanography grants 1829903 and 1829680 “Hydrothermal fungi in the Guaymas Basin Hydrocarbon Ecosystem” to V. Edgcomb and A. Teske, respectively. Postdoc G. Ramirez and Graduate student C.R. Chambers were supported by NSF Molecular and Cellular Biology grant 1817381 “Next Generation Physiology” and by ARPA-E grant “Mining the Deep Sea for Microbial Ethano- and Propanogenesis”. Sampling in Guaymas Basin was supported by collaborative NSF Biological Oceanography grants 1357238 and 1357360 “Collaborative Research: Microbial carbon cycling and its interaction with sulfur and nitrogen transformations in Guaymas Basin hydrothermal sediments” to A. Teske and S. B. Joye, respectively.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 5
    Publication Date: 2022-05-26
    Description: Dataset: Guaymas porewater methane
    Description: Porewater methane concentrations and d13C-CH4 values in Alvin pushcore samples from Guaymas Basin hydrothermal sediments collected on R/V Atlantis cruise AT37-06 in December 2016. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/842974
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1357238, NSF Division of Ocean Sciences (NSF OCE) OCE-1357360
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 6
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-05-26
    Description: Dataset: Geochemistry and radiotracer rates
    Description: This dataset contains porewater geochemistry and rate data obtained from Gulf of Mexico sediments collected using both push core and multiple core technology. Sediment push cores were collected across multiple dives of HOV Alvin, during cruises AT18-02 (2010) and AT26-13 (2014) aboard the R/V Atlantis. Multiple cores were collected during cruises EN527, EN528, EN529, and EN586 aboard the R/V Endeavor. Procedures for sample processing were identical for both types of cores. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/830008
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-0939564
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 7
    Publication Date: 2022-05-26
    Description: Dataset: Guaymas porewater nutrients
    Description: Porewater sulfate, sulfide, ammonia, phosphate, and silicate concentrations in Alvin pushcore samples from Guaymas Basin hydrothermal sediments collected on R/V Atlantis cruise AT37-06 in December 2016. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/843000
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1357238, NSF Division of Ocean Sciences (NSF OCE) OCE-1357360
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 8
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-05-26
    Description: Dataset: AT37-06 Sediment geochemistry
    Description: Sediment geochemistry from push cores obtained using the human-occupied deep-diving vehicle (HOV) Alvin dives 4867-4872 during the R/V Atlantis cruise AT37-06 in Guaymas Basin, Gulf of California (27 00.00 N, -111 20.00 W) in December 2016. These data were published in (Zhuang et al., 2018). For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/814391
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1357360
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 9
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Wilson, S. T., Al-Haj, A. N., Bourbonnais, A., Frey, C., Fulweiler, R. W., Kessler, J. D., Marchant, H. K., Milucka, J., Ray, N. E., Suntharalingam, P., Thornton, B. F., Upstill-Goddard, R. C., Weber, T. S., Arevalo-Martinez, D. L., Bange, H. W., Benway, H. M., Bianchi, D., Borges, A., V., Chang, B. X., Crill, P. M., del Valle, D. A., Farias, L., Joye, S. B., Kock, A., Labidi, J., Manning, C. C., Pohlman, J. W., Rehder, G., Sparrow, K. J., Tortell, P. D., Treude, T., Valentine, D. L., Ward, B. B., Yang, S., & Yurganov, L. N. Ideas and perspectives: a strategic assessment of methane and nitrous oxide measurements in the marine environment. Biogeosciences, 17(22), (2020): 5809-5828, https://doi.org/10.5194/bg-17-5809-2020.
    Description: In the current era of rapid climate change, accurate characterization of climate-relevant gas dynamics – namely production, consumption, and net emissions – is required for all biomes, especially those ecosystems most susceptible to the impact of change. Marine environments include regions that act as net sources or sinks for numerous climate-active trace gases including methane (CH4) and nitrous oxide (N2O). The temporal and spatial distributions of CH4 and N2O are controlled by the interaction of complex biogeochemical and physical processes. To evaluate and quantify how these mechanisms affect marine CH4 and N2O cycling requires a combination of traditional scientific disciplines including oceanography, microbiology, and numerical modeling. Fundamental to these efforts is ensuring that the datasets produced by independent scientists are comparable and interoperable. Equally critical is transparent communication within the research community about the technical improvements required to increase our collective understanding of marine CH4 and N2O. A workshop sponsored by Ocean Carbon and Biogeochemistry (OCB) was organized to enhance dialogue and collaborations pertaining to marine CH4 and N2O. Here, we summarize the outcomes from the workshop to describe the challenges and opportunities for near-future CH4 and N2O research in the marine environment.
    Description: This article was an outcome of a workshop organized by the Ocean Carbon and Biogeochemistry (OCB) project office, which is supported by the US National Science Foundation (grant no. 1558412) and the National Aeronautics and Space Administration (grant no. NNX17AB17G). The workshop received additional funding from the Scientific Committee on Ocean Research (SCOR) which receives funding from the US National Science Foundation (grant no. 1840868) and contributions by additional national SCOR committees. The Chilean COPAS N2O time-series measurements were supported by Agencia Nacional de Investigación y Desarrollo (grant no. 1200861).
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 10
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    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-05-26
    Description: Dataset: AT37-06 Sediment Geochemistry Summary
    Description: Sediment geochemistry summary from push cores collected during HOV Alvin dives during the R/V Atlantis cruise AT37-06 in the Guaymas Basin from December 2016. Part of this dataset was published in Zhuang et al., 2018. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/819127
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1357360
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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