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GEOMAR Library Ocean Research Information Access

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  • Springer Nature  (12)
  • PANGAEA  (10)
  • 2020-2024  (20)
  • 2020-2022  (2)
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  • 1
    Publication Date: 2024-06-09
    Description: The ²³⁴Th-²³⁸U radioactive pair has been extensively used to evaluate the efficiency with which photosyntetically fixed carbon is exported from the surface ocean by means of the biological pump since the 90's. The seminal work of Buesseler et al. (1992) proposed that particulate organic carbon (POC) flux can be indirectly calculated from ²³⁴Th distributions if the ratio of POC to ²³⁴Th measured on sinking particles (POC:²³⁴Th) at the desired export depth is known. Since then, a huge amount of ²³⁴Th depth profiles have been collected using a variety of sampling instruments and strategies that have changed along years. This is a global oceanic compilation of ²³⁴Th measurements, that collects results from innumerable researchers and laboratories over a period exceeding 50 years. The present compilation is made of a total 223 datasets: 214 from studies published either in articles in referred journals, PhD thesis or repositories, and 9 unpublished datasets. Including measurements from JGOFS, VERTIGO and GEOTRACES programs, with sampling from approximately 5000 locations spanning all the oceans. The compilation includes total ²³⁴Th profiles, dissolved and particulate ²³⁴Th concentrations, and POC:²³⁴Th ratios (both from pumps and sediment traps) for two sizes classes (1-53 μm and 〈 53 μm) when available. Appropriate metadata have been included, including geographic location, date, and sample depth, among others. When available, we also include water temperature, salinity, ²³⁸U data and particulate organic nitrogen data. Data sources and methods information (including ²³⁸U and ²³⁴Th) are also detailed along with valuable information for future data analysis such as bloom stage and steady/non-steady state conditions at the sampling moment. This undertaking is a treasure of data to understand and quantify how oceanic carbon cycle functions and how it will change in future. The compilation can be downloaded in three different ways: 1) A single merged file including all the individual excel files. This option can be accessed under "Other version: More than 50 years of Th-234 data: a comprehensive global oceanic compilation (single xlsx file)". 2) A summary table that includes details from cruise, sampling dates, techniques applied, authors and DOI of the compiled ²³⁴Th data, among others, each line corresponds to a specific dataset. The table can be accessed by clicking ""View dataset as HTML" and downloaded in "Download dataset as tab-delimited text". 3) Individual Excel files for each dataset can be manually chosen from the summary table, corresponding to the complete ²³⁴Th dataset and metadata from a specific publication or program. This option is available by clicking "View dataset as HTML". Furthermore, all files referred to can be downloaded in one go as ZIP or TAR.
    Keywords: 234Th; Author(s); Binary Object; biological carbon pump; Carbon, organic, particulate/Thorium-234 ratio; carbon export; Chief scientist(s); Cruise/expedition; DATE/TIME; ELEVATION; Gear; GEOTRACES; Global marine biogeochemical cycles of trace elements and their isotopes; JGOFS; Joint Global Ocean Flux Study; Journal/report title; LATITUDE; LONGITUDE; Multiple cruises/expeditions; Ocean; Ocean and sea region; Period; POC flux; Project; Reference of data; Thorium-234, dissolved; Thorium-234, particulate; Thorium-234, total; Uniform resource locator/link to reference; Uranium-238; Vessel; Year of publication
    Type: Dataset
    Format: text/tab-separated-values, 4056 data points
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2023-03-07
    Description: Coastal water quality in urban cities is increasingly impacted by human activities such as agricultural runoff, sewage discharges, and poor sanitation. However, environmental factors controlling bacteria abundance remain poorly understood. The study employed multiple indicators to assess ten beach water qualities in Ghana during minor wet seasons. Environmental parameters (e.g. temperature, electrical conductivity, total dissolved solids) were measured in situ using the Horiba multiple parameter probe. Surface water samples were collected to measure total suspended solids, nutrients, and chlorophyll-a via standard methods and bacteria determination through membrane filtration. Environmental parameters measured showed no significant variation for the sample period. However, bacteria loads differ significantly (p = 0.024) among the beaches and influenced significantly by nitrate (55.3%, p = 0.02) and total dissolved solids (17.1%, p = 0.017). The baseline study detected an increased amount of total coliforms and faecal indicator bacteria (Escherichia coli and Enterococcus spp.) in beach waters along the coast of Ghana, suggesting faecal contamination, which can pose health risks. The mean ± standard deviations of bacteria loads in beach water are total coliforms (4.06 × 103 ± 4.16 × 103 CFU/100 mL), E. coli (7.06 × 102 ± 1.72 × 103 CFU/100 mL), and Enterococcus spp. (6.15 × 102 ± 1.75 × 103 CFU/100 mL). Evidence of pollution calls for public awareness to prevent ecological and health-related risks and policy reforms to control coastal water pollution. Future research should focus on identifying the sources of contamination in the tropical Atlantic region.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
    Format: application/pdf
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  • 3
    Publication Date: 2024-04-27
    Description: There is a growing need for past weather and climate data to support science and decision-making. This paper describes the compilation and the construction of a global multivariable (air temperature, pressure, precipitation sum, number of precipitation days) monthly instrumental climate database that encompasses a substantial body of the known early instrumental time series. The dataset contains series compiled from existing databases that start before 1890 (though continuing to the present) as well as a large amount of newly rescued data. All series underwent a quality control procedure and subdaily series were processed to monthly mean values. An inventory was compiled, and the collection was deduplicated based on coordinates and mutual correlations. The data are provided in a common format accompanied by the inventory. The collection totals 12452 meteorological records in 118 countries. The data has been merged from 18250 original data files. The data can be used for climate reconstructions and analyses. It is the most comprehensive global monthly climate data set for the preindustrial period.
    Keywords: A Palaeoreanalysis To Understand Decadal Climate Variability; de-duplication; early instrumental; GlobCover; PALAEO-RA; paleoclimatology; Paleometeorology; quality control; Time series
    Type: Dataset
    Format: application/zip, 24 datasets
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  • 4
    Publication Date: 2024-04-10
    Description: The development of algorithms for remote sensing of water quality (RSWQ) requires a large amount of in situ data to account for the bio-geo-optical diversity of inland and coastal waters. The GLObal Reflectance community dataset for Imaging and optical sensing of Aquatic environments (GLORIA) includes 7,572 curated hyperspectral remote sensing reflectance measurements at 1 nm intervals within the 350 to 900 nm wavelength range. In addition, at least one co-located water quality measurement of chlorophyll a, total suspended solids, absorption by dissolved substances, and Secchi depth, is provided. The data were contributed by researchers affiliated with 59 institutions worldwide and come from 450 different water bodies, making GLORIA the de-facto state of knowledge of in situ coastal and inland aquatic optical diversity. Each measurement is documented with comprehensive methodological details, allowing users to evaluate fitness-for-purpose, and providing a reference for practitioners planning similar measurements. We provide open and free access to this dataset with the goal of enabling scientific and technological advancement towards operational regional and global RSWQ monitoring.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
    Format: application/pdf
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  • 5
    Publication Date: 2024-01-16
    Description: Data on infauna and sediment characteristics were collected as part of an extensive research program on the effects of offshore wind turbines on the marine environment funded by the German Federal Maritime and Hydrographic Agency. The investigations were performed in the first German offshore wind farm alpha ventus in the German Bight (North Sea). The overall aim of the program was to evaluate the German national standard concept for environmental impact assessments for offshore wind farms. Specifically, our study addressed the potential changes of the infauna communities in different distances from single turbines in an early stage of the operational phase of the wind farm. The data were collected during the cruises HE296 (2008), HE313 (2009), HE340 (2010) and HE369 (2000) of the German research vessel RV Heincke. Infauna samples were taken with van Veen grab samples (sampling area: 0.1 m2, weight: 95 kg) inside the wind farm and in two reference sites outside the wind farm. Three replicate samples were taken at each station. The samples were sieved through a 1 mm mesh and species of the macro-infauna were determined to the lowest taxonomic level possible. Sub-samples of the sediments were fractionated in a cascade of sieves of different mesh sizes to determine the grain size distributions. The organic contents of the sediments were determined as weight loss on ignition. The dataset comprises 11,400 count and biomass records for 103 infaunal taxa (89 % on species level, 11 % others) from 528 samples. Sediments were characterised for 176 van Veen grabs.
    Type: Dataset
    Format: application/zip, 2 datasets
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  • 6
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    Springer Nature
    In:  EPIC3Maritime Studies, Springer Nature, 21(3), pp. 327-338, ISSN: 1872-7859
    Publication Date: 2023-10-30
    Description: 〈jats:title〉Abstract〈/jats:title〉〈jats:p〉In spite of a proliferation of academic and policy-oriented interest in deep sea mining (DSM), this paper argues that two underlying questions remain underexplored. The first relates to 〈jats:italic〉what〈/jats:italic〉 exactly the seabed 〈jats:italic〉is〈/jats:italic〉; the second to 〈jats:italic〉who〈/jats:italic〉 the stakeholders 〈jats:italic〉are〈/jats:italic〉. It is argued that a greater interrogation of how the seabed is defined and understood, and a deeper consideration of how stakeholders are identified and the politics of their inclusion, is crucial to the enactment of policy and planning techniques. Through the analysis of current regulations to govern DSM in both national and international jurisdictions, this paper critically examines these seemingly banal but vital questions in different contexts. It is contended that most regulations are ‘fuzzy’ when it comes to addressing these questions, with the result that different understandings of the seabed and the implications of mining are ignored and that who stakeholders are and how they are defined causes many relevant voices to be unheard. It is argued, therefore, that it is imperative to address these often-overlooked questions directly in order to inform future seabed policy and governance.〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
    Format: application/pdf
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  • 7
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    Springer Nature
    In:  EPIC3The ISME Journal: Multidisciplinary Journal of Microbial Ecology, Springer Nature, 16(8), pp. 2002-2014, ISSN: 1751-7362
    Publication Date: 2023-11-14
    Description: Genome analyses predict that the cofactor cobalamin (vitamin B12, called B12 herein) is produced by only one-third of all prokaryotes but almost all encode at least one B12-dependent enzyme, in most cases methionine synthase. This implies that the majority of prokaryotes relies on exogenous B12 supply and interacts with producers. B12 consists of a corrin ring centred around a cobalt ion and the lower ligand 5’6-dimethylbenzimidazole (DMB). It has never been tested whether availability of this pivotal cofactor, DMB or its intermediate α-ribazole affect growth and composition of prokaryotic microbial communities. Here we show that in the subtropical, equatorial and polar frontal Pacific Ocean supply of B12 and α-ribazole enhances heterotrophic prokaryotic production and alters the composition of prokaryotic and heterotrophic protist communities. In the polar frontal Pacific, the SAR11 clade and Oceanospirillales increased their relative abundances upon B12 supply. In the subtropical Pacific, Oceanospirillales increased their relative abundance upon B12 supply as well but also downregulated the transcription of the btuB gene, encoding the outer membrane permease for B12. Surprisingly, Prochlorococcus, known to produce pseudo-B12 and not B12, exhibited significant upregulation of genes encoding key proteins of photosystem I + II, carbon fixation and nitrate reduction upon B12 supply in the subtropical Pacific. These findings show that availability of B12 and α-ribazole affect growth and composition of prokaryotic and protist communities in oceanic systems thus revealing far-reaching consequences of methionine biosynthesis and other B12-dependent enzymatic reactions on a community level.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
    Format: application/pdf
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  • 8
    Publication Date: 2024-03-27
    Description: Interest in deep-sea mining for polymetallic nodules as an alternative source to onshore mines for various high-technology metals has risen in recent years, as demands and costs have increased. The need for studies to assess its short- and long-term consequences on polymetallic nodule ecosystems is therefore also increasingly prescient. Recent image-based expedition studies have described the temporal impacts on epi-/megafauna seafloor communities across these ecosystems at particular points in time. However, these studies have failed to capture information on large infauna within the sediments or give information on potential transient and temporally limited users of these areas, such as mobile surface deposit feeders or fauna responding to bloom events or food fall depositions. This study uses data from the Peru Basin polymetallic nodule province, where the seafloor was previously disturbed with a plough harrow in 1989 and with an epibenthic sled (EBS) in 2015, to simulate two contrasting possible impact forms of mining disturbance. To try and address the shortfall on information on transient epifauna and infauna use of these various disturbed and undisturbed areas of nodule-rich seafloor, images collected 6 months after the 2015 disturbance event were inspected and all Lebensspuren, ‘traces of life’, were characterized by type (epi- or infauna tracemakers, as well as forming fauna species where possible), along with whether they occurred on undisturbed seafloor or regions disturbed in 1989 or 2015. The results show that epi- and endobenthic Lebensspuren were at least 50% less abundant across both the ploughed and EBS disturbed seafloors. This indicates that even 26 years after disturbance, sediment use by fauna may remain depressed across these areas.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
    Format: application/pdf
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  • 9
    Publication Date: 2024-02-23
    Description: Time series data of physical oceanography (seawater conductivity, temperature, pressure, salinity) and ocean current velocities were obtained from mooring M6 on the upper part (500 m isobath) of the continental slope, just east of the Filchner Trough in the southern Weddell Sea in February 2017 - February 2021. The mooring was deployed during the WAPITI expedition on James Clark Ross (JR16004), and recovered during the COSMUS expedition with Polarstern (PS124). The attached archive contains data from 1 RCM7 (24 meters above bottom (mab herafter) and sampling interval (sint hereafter) 2h), 5 SBE56 (25, 59, 74, 126, 202 mab, sint: 120 s), 3 SBE37 (34, 99, 176 mab, sint: 600 s), 1 RDI ADCP 150 kHz (235 mab, upwardlooking, sint: 1h), 1 SBE39 (15 mab, sint: 900s). Mooring diagrams and information about data processing are provided
    Keywords: ADCP; Antarctica; AWI_PhyOce; Continental Slope; Filchner Region; Filchner Trough; GPF 19-2_039, COSMUS; James Clark Ross; JR16004; JR16004_160; JR16004_160, PS124_99-1; M6_MOOR_WeddellSea; M6, M6_MOOR_WeddellSea; MOOR; Mooring; oceanographic moorings; oceanographic time series; Physical Oceanography @ AWI; Polarstern; PS124; PS124_99-1; Temperature and Salinity; WAPITI; Weddell Sea
    Type: Dataset
    Format: application/zip, 2 datasets
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  • 10
    Publication Date: 2024-02-23
    Description: Time series data of physical oceanography (seawater conductivity, temperature, pressure, salinity) and ocean current velocities were obtained from mooring M3 on the upper part (750 m isobath) of the continental slope, just east of the Filchner Trough in the southern Weddell Sea in February 2017 - February 2021. The mooring was deployed during the WAPITI expedition on James Clark Ross (JR16004), and recovered during the COSMUS expedition with Polarstern (PS124). The attached archive contains data from 1 RCM7 (21 meters above bottom (mab herafter) and sampling interval (sint hereafter) 2h), 13 SBE56 (22,56,81,106,159,184,6508,260,285,310,335,360,385 mab, sint: 120 s), 4 SBE37 (31, 134, 209, 410 mab, sint: 600 s), 1 RDI ADCP 75 kHz (235 mab, upwardlooking, sint: 2h), 1 SBE39 (435 mab, sint: 900s). Mooring diagrams and information about data processing are provided.
    Keywords: ADCP; Antarctica; AWI_PhyOce; Continental Slope; Filchner Region; Filchner Trough; GPF 19-2_039, COSMUS; James Clark Ross; JR16004; JR16004_162; JR16004_162, PS124_14-1; M3_MOOR_WeddellSea; M3, M3_MOOR_WeddellSea; MOOR; Mooring; oceanographic moorings; oceanographic time series; Physical Oceanography @ AWI; Polarstern; PS124; PS124_14-1; Temperature and Salinity; WAPITI; Weddell Sea
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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