GLORIA

GEOMAR Library Ocean Research Information Access

feed icon rss

Your email was sent successfully. Check your inbox.

An error occurred while sending the email. Please try again.

Proceed reservation?

Export
Filter
  • 2020-2023  (5)
  • 1990-1994  (2)
  • 1
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology ecology 8 (1991), S. 0 
    ISSN: 1574-6941
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Type of Medium: Electronic Resource
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 2
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    FEMS microbiology letters 85 (1991), S. 0 
    ISSN: 1574-6968
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology
    Notes: Abstract The utilization of glutamic acid and alanine in anoxic marine sediments was studied using sediments collected from a tidal flat on the Atlantic Ocean side of Virginia's Eastern Shore (Bordens-take Bay) and a site in the mid-Chesapeake Bay. At both sites volatile fatty acids (VFAs) were produced as intermediates in the catabolism (or oxidation) of both amino acids. In contrast, methylated amines were not produced as metabolic intermediates from either amino acid. The addition of 20 mM molybdate to sediment slurries (to inhibit bacterial sulfate reduction) led to the continuous production of VFAs from both amino acids, indicating that the majority of this VFA production from these amino acids occurred by fermentative processes. Non-catabolic uptake of these amino acids (presumably into bacterial bio-mass) also appeared to be an important process in removing alanine and glutamic acid from these sediment slurries. A kinetic model used to analyze these data indicated that ? 85% of the alanine catabolism occurred by fermentative processes, with remineralization by sulfate reducing bacteria accounting for the difference. In contrast, all of the glutamic acid catabolism appeared to occur by fermentation. Calculations using data on VFA and ΣCO2 production in molybdate inhibited sediments also suggested that acetate and formate were the predominant VFAs produced by the fermentation of alanine, and perhaps glutamic acid as well. The oxidation of dissolved, free amino acids appeared to account for a significant fraction of the ammonium production in these anoxic marine sediments, although amino acids represented less than ? 2% of the carbon sources/electron donors used by sulfate reduction. These observations suggest that the general pathway of amino acid utilization in anoxic sediments involves their oxidation by fermentative bacteria to produce compounds such as VFA or H2 which are then themselves used as substrates by either sulfate reducing or methanogenic bacteria. As such, dissolved free amino acids appear to play an important role as intermediates in carbon and nitrogen cycling in these environments.
    Type of Medium: Electronic Resource
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 3
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Long, M. H., Rheuban, J. E., McCorkle, D. C., Burdige, D. J., & Zimmerman, R. C. Closing the oxygen mass balance in shallow coastal ecosystems. Limnology and Oceanography, 64(6), (2019): 2694-2708, doi: 10.1002/lno.11248.
    Description: The oxygen concentration in marine ecosystems is influenced by production and consumption in the water column and fluxes across both the atmosphere–water and benthic–water boundaries. Each of these fluxes has the potential to be significant in shallow ecosystems due to high fluxes and low water volumes. This study evaluated the contributions of these three fluxes to the oxygen budget in two contrasting ecosystems, a Zostera marina (eelgrass) meadow in Virginia, U.S.A., and a coral reef in Bermuda. Benthic oxygen fluxes were evaluated by eddy covariance. Water column oxygen production and consumption were measured using an automated water incubation system. Atmosphere–water oxygen fluxes were estimated by parameterizations based on wind speed or turbulent kinetic energy dissipation rates. We observed significant contributions of both benthic fluxes and water column processes to the oxygen mass balance, despite the often‐assumed dominance of the benthic communities. Water column rates accounted for 45% and 58% of the total oxygen rate, and benthic fluxes accounted for 23% and 39% of the total oxygen rate in the shallow (~ 1.5 m) eelgrass meadow and deeper (~ 7.5 m) reef site, respectively. Atmosphere–water fluxes were a minor component at the deeper reef site (3%) but a major component at the shallow eelgrass meadow (32%), driven by diel changes in the sign and strength of atmosphere–water gradient. When summed, the measured benthic, atmosphere–water, and water column rates predicted, with 85–90% confidence, the observed time rate of change of oxygen in the water column and provided an accurate, high temporal resolution closure of the oxygen mass balance.
    Description: This work was substantially improved by comments from two anonymous reviewers. We thank Victoria Hill, David Ruble, Jeremy Bleakney, and Brian Collister for assistance in the field and the staff of the Bermuda Institute of Ocean Sciences and the Anheuser‐Busch Coastal Research Center for logistical support. This work was supported by NSF OCE grants 1657727 (to M.H.L. and D.C.M.), 1635403 (to R.C.Z. and D.J.B.), and 1633951 (to M.H.L.).
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 4
    facet.materialart.
    Unknown
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-05-26
    Description: Dataset: Sediment porosity
    Description: Porosity from sediment cores collected on the R/V Nathaniel B. Palmer cruise NBP1601 to the West Antarctic continental shelf in January of 2016. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/813159
    Description: NSF Division of Ocean Sciences (NSF OCE) OPP-1551195
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 5
    facet.materialart.
    Unknown
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-05-26
    Description: Dataset: Sediment iron
    Description: Sediment iron data from sediment cores collected on the R/V Nathaniel B. Palmer cruise NBP1601 to the West Antarctic continental shelf in January of 2016. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/813152
    Description: NSF Division of Ocean Sciences (NSF OCE) OPP-1551195
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 6
    facet.materialart.
    Unknown
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-05-26
    Description: Dataset: Dissolved oxygen
    Description: Dissolved oxygen from sediment cores collected on the R/V Nathaniel B. Palmer cruise NBP1601 to the West Antarctic continental shelf in January of 2016. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/813140
    Description: NSF Division of Ocean Sciences (NSF OCE) OPP-1551195
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 7
    facet.materialart.
    Unknown
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Publication Date: 2022-05-26
    Description: Dataset: Pore water geochemistry
    Description: Pore water geochemistry from sediment cores collected on the R/V Nathaniel B. Palmer cruise NBP1601 to the West Antarctic continental shelf in January of 2016. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/813166
    Description: NSF Division of Ocean Sciences (NSF OCE) OPP-1551195
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
Close ⊗
This website uses cookies and the analysis tool Matomo. More information can be found here...