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  • 2005-2009  (24)
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  • 1
    Publication Date: 2016-05-25
    Description: The ecological niche of nitrate-storing Beggiatoa, and their contribution to the removal of sulfide were investigated in coastal sediment. With microsensors a clear suboxic zone of 2-10cm thick was identified, where neither oxygen nor free sulfide was detectable. In this zone most of the Beggiatoa were found, where they oxidize sulfide with internally stored nitrate. The sulfide input into the suboxic zone was dominated by an upward sulfide flux from deeper sediment, whereas the local production in the suboxic zone was much smaller. Despite their abundance, the calculated sulfide-oxidizing capacity of the Beggiatoa could account for only a small fraction of the total sulfide removal in the sediment. Consequently, most of the sulfide flux into the suboxic layer must have been removed by chemical processes, mainly by precipitation with Fe2+ and oxidation by Fe(III), which was coupled with a pH increase. The free Fe2+ diffusing upwards was oxidized by Mn(IV), resulting in a strong pH decrease. The nitrate storage capacity allows Beggiatoa to migrate randomly up and down in anoxic sediments with an accumulated gliding distance of 4m before running out of nitrate. We propose that the steep sulfide gradient and corresponding high sulfide flux, a typical characteristic of Beggiatoa habitats, is not needed for their metabolic performance, but rather used as a chemotactic cue by the highly motile filaments to avoid getting lost at depth in the sediment. Indeed sulfide is a repellant for Beggiatoa.
    Type: Article , PeerReviewed
    Format: text
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  • 2
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    PANGAEA
    In:  Supplement to: Lichtschlag, Anna; Felden, Janine; Brüchert, Volker; Boetius, Antje; de Beer, Dirk (2010): Geochemical processes and chemosynthetic primary production in different thiotrophic mats of the Hakon Mosby Mud Volcano (Barents Sea). Limnology and Oceanography, 55(2), 931-949, https://doi.org/10.4319/lo.2010.55.2.0931
    Publication Date: 2023-06-08
    Description: We have investigated if in a cold seep methane or sulfide is used for chemosynthetic primary production and if significant amounts of the sulfide produced by anaerobic oxidation of methane are oxidized geochemically and hence are not available for chemosynthetic production. Geochemically controlled redox reactions and biological turnover were compared in different habitats of the Håkon Mosby Mud Volcano. The center of the mud volcano is characterized by the highest fluid flow, and most primary production by the microbial community depends on oxidation of methane. The small amount of sulfide produced is oxidized geochemically with oxygen or is precipitated with dissolved iron. In the medium flow peripheral Beggiatoa habitat sulfide is largely oxidized biologically. The oxygen and nitrate supply is high enough that Beggiatoa can oxidize the sulfide completely, and chemical sulfide oxidation or precipitation is not important. An internally stored nitrate reservoir with average concentrations of 110 mmol L-1 enables the Beggiatoa to oxidize sulfide anaerobically. The pH profile indicates sequential sulfide oxidation with elemental sulfur as intermediate. Gray thiotrophic mats associated with perturbed sediments showed a high heterogeneity in sulfate turnover and high sulfide fluxes, balanced by the opposing oxygen and nitrate fluxes so that biological oxidation dominates over geochemical sulfide removal processes. The three habitats indicate substantial small-scale variability in carbon fixation pathways either through direct biological use of methane or through indirect carbon fixation of methane-derived carbon dioxide by chemolithotrophic sulfide oxidation.
    Keywords: Håkon Mosby Mud Volcano; HERMES; Hotspot Ecosystem Research on the Margins of European Seas; MICP; Microsensor profiler; MUC; MultiCorer; Pourquoi Pas ? (2005); PUC; Push corer; VICKING; VKGD276/PC-11; VKGD276/PC-12; VKGD276/PC-13; VKGD276/PC-2; VKGD276/PC-3; VKGD276/PC-5; VKGD276/PC-6; VKGD276/PC-7; VKGD276/PC-8; VKGD277/MIC-4; VKGD277/MIC-5; VKGD277/MIC-6; VKGD277/PC-1; VKGD277/PC-3; VKGD277/PC-7; VKGD277/PC-8; VKGD278/MIC-10; VKGD278/MIC-7; VKGD278/MIC-8; VKGD278/MIC-9; VKGMTB6
    Type: Dataset
    Format: application/zip, 21 datasets
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  • 3
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    Unknown
    PANGAEA
    In:  Max-Planck-Institut für Marine Mikrobiologie
    Publication Date: 2023-06-08
    Keywords: Acridine Orange Direct Counting (AODC); DEPTH, sediment/rock; HERMES; HERMIONE; Hotspot Ecosystem Research and Mans Impact On European Seas; Hotspot Ecosystem Research on the Margins of European Seas; Methane oxidation rate; Pourquoi Pas ? (2005); Prokaryotes, abundance as single cells; PUC; Push corer; Radioactive tracer injection; Storegga North East; VICKING; VKGD272/PC-3
    Type: Dataset
    Format: text/tab-separated-values, 20 data points
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  • 4
    Publication Date: 2023-09-07
    Keywords: DEPTH, sediment/rock; Epifluorescence microscopy (Boetius et al. 2000); HERMES; Hotspot Ecosystem Research on the Margins of European Seas; Pourquoi Pas ? (2005); Prokaryotes, abundance as single cells; PUC; Push corer; Storegga North East; VICKING; VKGD272/PC-29
    Type: Dataset
    Format: text/tab-separated-values, 9 data points
    Location Call Number Limitation Availability
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  • 5
    Publication Date: 2023-09-07
    Keywords: DEPTH, sediment/rock; Epifluorescence microscopy (Boetius et al. 2000); HERMES; Hotspot Ecosystem Research on the Margins of European Seas; Pourquoi Pas ? (2005); Prokaryotes, abundance as single cells; PUC; Push corer; Storegga North East; VICKING; VKGD272/PC-32
    Type: Dataset
    Format: text/tab-separated-values, 6 data points
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  • 6
    Publication Date: 2023-09-07
    Keywords: DEPTH, sediment/rock; Epifluorescence microscopy (Boetius et al. 2000); HERMES; Hotspot Ecosystem Research on the Margins of European Seas; Pourquoi Pas ? (2005); Prokaryotes, abundance as single cells; PUC; Push corer; Storegga North East; VICKING; VKGD272/PC-31
    Type: Dataset
    Format: text/tab-separated-values, 6 data points
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  • 7
    Publication Date: 2023-09-07
    Keywords: Acridine Orange Direct Counting (AODC); DEPTH, sediment/rock; HERMES; HERMIONE; Hotspot Ecosystem Research and Mans Impact On European Seas; Hotspot Ecosystem Research on the Margins of European Seas; Pourquoi Pas ? (2005); Prokaryotes, abundance as single cells; PUC; Push corer; Radioactive tracer injection; Storegga North East; Sulfate reduction rate; VICKING; VKGD272/PC-34
    Type: Dataset
    Format: text/tab-separated-values, 17 data points
    Location Call Number Limitation Availability
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  • 8
    Publication Date: 2023-09-07
    Keywords: Acridine Orange Direct Counting (AODC); DEPTH, sediment/rock; HERMES; HERMIONE; Hotspot Ecosystem Research and Mans Impact On European Seas; Hotspot Ecosystem Research on the Margins of European Seas; Pourquoi Pas ? (2005); Prokaryotes, abundance as single cells; PUC; Push corer; Radioactive tracer injection; Storegga North East; Sulfate reduction rate; VICKING; VKGD272/PC-4
    Type: Dataset
    Format: text/tab-separated-values, 18 data points
    Location Call Number Limitation Availability
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  • 9
    Publication Date: 2023-09-07
    Keywords: DEPTH, sediment/rock; HERMES; HERMIONE; Hotspot Ecosystem Research and Mans Impact On European Seas; Hotspot Ecosystem Research on the Margins of European Seas; Pourquoi Pas ? (2005); PUC; Push corer; Radioactive tracer injection; Storegga North East; Sulfate reduction rate; VICKING; VKGD275/PC-10
    Type: Dataset
    Format: text/tab-separated-values, 13 data points
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  • 10
    Publication Date: 2023-09-07
    Keywords: Acridine Orange Direct Counting (AODC); DEPTH, sediment/rock; HERMES; HERMIONE; Hotspot Ecosystem Research and Mans Impact On European Seas; Hotspot Ecosystem Research on the Margins of European Seas; Pourquoi Pas ? (2005); Prokaryotes, abundance as single cells; PUC; Push corer; Radioactive tracer injection; Storegga North East; Sulfate reduction rate; VICKING; VKGD275/PC-1
    Type: Dataset
    Format: text/tab-separated-values, 19 data points
    Location Call Number Limitation Availability
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