Description: Stable isotope analysis (SIA) is used to investigate the trophic ecology of organisms. After field sampling, tissues are usually preserved dried or frozen. However, samples not initially collected for SIA such as museum samples are often fixed in preservative fluids. Nevertheless, preservative fluids may alter stable isotope ratios and, potentially, diverse metrics derived from isotopic data (i.e. isotopic niches). Consequently, their effects should be quantified to determine whether museum samples are suitable for SIA. This dataset is the result of the experimental assessment of the long-term effects (up to 24 months) of freezing, drying, formaldehyde and ethanol preservation on δ13C, δ15N, δ34S values, C/N ratios and on isotopic niche parameters of the sea star Marthasterias glacialis (Echinoderm). Formaldehyde quickly affected δ13C values. However, after being altered, the mean δ13C value remained stable over time, suggesting that a correction factor could be used regardless of preservation time. Ethanol induced a gradual increase of δ13C values until an asymptote that could also be adjusted with a correction factor. None of the preservation methods had significant or consistent effect on δ15N. Formaldehyde induced a decrease of δ34S values that could be adjusted by adding correction factors. The parameters of the isotopic niches were slightly modified across time when computed with δ13C and δ15N values, but inconsistent variations occurred when computed with δ13C and δ34S values. Overall, these results show that correction factors may be used to mitigate the effects of the preservation method on stable isotope ratios of sea stars and that, in most case, museum samples are suitable to calculate isotopic niche parameters.

Description: Gut content examination and trophic markers (fatty acids, stable isotopes of C and N) were combined to delineate the diet of the dominant species of amphipods from Mediterranean Posidonia oceanica seagrass meadows and to highlight trophic diversity among this community. Our results indicate that, although all dominant species heavily relied on macroalgal epiphytes, considerable interspecific dietary differences existed. Carbon stable isotope ratios notably showed that some of the amphipod species favored grazing on epiphytes from leaves or litter fragments (Apherusa chiereghinii, Aora spinicornis, Gammarus aequicauda), while others such as Dexamine spiniventris preferred epiphytes from rhizomes. The remaining amphipods (Caprella acanthifera, Ampithoe helleri and Gammarella fucicola) readily consumed both groups. In addition, SIAR modeling suggested that most species had a mixed diet, and relied on several food items. Fatty acid analysis and gut contents revealed that contributions of microepiphytic diatoms and of benthic and suspended particulate organic matter to the diet of amphipods were anecdotal. None of the examined species seemed to graze on their seagrass host [low 18:2(n-6) and 18:3(n-3) fatty acids contents], but Gammarus aequicauda partly relied on seagrass leaf detritus, as demonstrated by the lesser 13C-depletion of their tissues. Overall, our findings suggest that amphipods, because of their importance in the transfer of organic matter from primary producers and detritus to higher rank consumers, are key items in P. oceanica-associated food webs.

Description: A rigorous synthesis of the sea-ice ecosystem and linked ecosystem services highlights that the sea-ice ecosystem supports all 4 ecosystem service categories, that sea-ice ecosystems meet the criteria for ecologically or biologically significant marine areas, that global emissions driving climate change are directly linked to the demise of sea-ice ecosystems and its ecosystem services, and that the sea-ice ecosystem deserves specific attention in the evaluation of marine protected area planning. The synthesis outlines (1) supporting services, provided in form of habitat, including feeding grounds and nurseries for microbes, meiofauna, fish, birds and mammals (particularly the key species Arctic cod, Boreogadus saida, and Antarctic krill, Euphausia superba, which are tightly linked to the sea-ice ecosystem and transfer carbon from sea-ice primary producers to higher trophic level fish, mammal species and humans); (2) provisioning services through harvesting and medicinal and genetic resources; (3) cultural services through Indigenous and local knowledge systems, cultural identity and spirituality, and via cultural activities, tourism and research; (4) (climate) regulating services through light regulation, the production of biogenic aerosols, halogen oxidation and the release or uptake of greenhouse gases, for example, carbon dioxide. The ongoing changes in the polar regions have strong impacts on sea-ice ecosystems and associated ecosystem services. While the response of sea-ice–associated primary production to environmental change is regionally variable, the effect on iceassociated mammals and birds is predominantly negative, subsequently impacting human harvesting and cultural services in both polar regions. Conservation can help protect some species and functions. However, the key mitigation measure that can slow the transition to a strictly seasonal ice cover in the Arctic Ocean, reduce the overall loss of sea-ice habitats from the ocean, and thus preserve the unique ecosystem services provided by sea ice and their contributions to human well-being is a reduction in carbon emissions.

Description: Seagrass meadows are among the most diverse and productive coastal ecosystems in the world. Currently, the accelerating loss of these habitats is recognized worldwide. In the southern Baltic Sea, a natural recovery of Zostera marina meadows has occurred after a dramatic reduction within the last century. The aim of this study is to understand if and how the recovering eelgrass meadows affect the functioning of benthic ecosystems. The trophic links within the benthic food webs in the seagrass meadows and bare sandy bottoms were depicted and compared. The trophic connections were examined by combining stable isotope (SI) composition (δ13C, δ15N) and fatty acid (FA) profiles of meio- and macrofauna consumers and of potential food sources (particulate organic matter, surface sediment organic matter, epiphytes, microphytobenthos/bacteria and macrophytes) in a Bayesian mixing model framework (MixSIAR). Significantly higher amounts of the FA bacterial marker (C18:1ɷ7) were observed in meiofauna (approximately 40%) than in the macrofauna (1% on average), suggesting that bacteria are an important part of the meiofauna diet. The mixing model results indicated that the benthic consumers in the vegetated habitat utilized more food sources (e.g., epiphytes in the diets of meiofauna and macrofaunal grazers) and thus had a more diverse diet. Macrofaunal omnivores relied to a larger degree on animal-derived organic matter in vegetated habitat, which could be linked to higher invertebrate prey availability. The results highlight the importance of recovering seagrass meadows in driving the mechanisms responsible for food web organization. Any type of change to the state of seagrass meadows is crucial to the functioning and stability of marine ecosystems.

Description: Seagrass meadows ecosystem engineering effects are correlated to their density (which is in turn linked to seasonal cycles) and often cannot be perceived below a given threshold level of engineer density. The density and biomass of seagrass meadows (Z. marina) together with associated macrophytes undergo substantial seasonal changes, with clear declines in winter. The present study aims to test whether the seasonal changes in the density of recovering seagrass meadows affect the benthic food webs of the southern Baltic Sea (Puck Bay). It includes meiofauna, macrofauna and fish of vegetated and unvegetated habitats in summer and winter seasons. Two levels of organization have been tested – species-specific diet preferences using stable isotopes (δ13C, δ15N) in Bayesian mixing models (MixSIAR) and the community-scale food web characteristics by means of isotopic niches (SIBER). Between-habitat differences were observed for grazers, as a greater food source diversity in species from vegetated habitats was noted in both seasons. Larger between-habitat differences in winter were documented for suspension/detritus feeders. The community-wide approach showed that the differences between the habitats were greater in winter than in summer (as indicated by the lower overlap of the respective isotope niches). Overall, the presence of seagrass meadows increased ecological stability (in terms of the range of food sources utilized by consumers) in the faunal assemblage, while invertebrates from unvegetated areas shifted their diet to cope with winter conditions. Therefore, as a more complex system, not sensitive to seasonal changes, Z. marina meadows create a stable habitat with high resilience potential.

Description: The increasing demand for metals is pushing forward the progress of deep‐sea mining industry. The abyss between the Clarion and Clipperton Fracture Zones (CCFZ), a region holding a higher concentration of minerals than land deposits, is the most targeted area for the exploration of polymetallic nodules worldwide, which may likely disturb the seafloor across large areas and over many years. Effects from nodule extraction cause acute biodiversity loss of organisms inhabiting sediments and polymetallic nodules. Attention to deep‐sea ecosystems and their services has to be considered before mining starts but the lack of basic scientific knowledge on the methodologies for the ecological surveys of fauna in the context of deep‐sea mining impacts is still scarce. We review the methodology to sample, process and investigate metazoan infauna both inhabiting sediments and nodules dwelling on these polymetallic‐nodule areas. We suggest effective procedures for sampling designs, devices and methods involving gear types, sediment processing, morphological and genetic identification including metabarcoding and proteomic fingerprinting, the assessment of biomass, functional traits, fatty acids, and stable isotope studies within the CCFZ based on both first‐hand experiences and literature. We recommend multi‐ and boxcorers for the quantitative assessments of meio‐ and macrofauna, respectively. The assessment of biodiversity at species level should be focused and/or the combination of morphological with metabarcoding or proteomic fingerprinting techniques. We highlight that biomass, functional traits, and trophic markers may provide critical insights for biodiversity assessments and how statistical modeling facilitates predicting patterns spatially across point‐source data and is essential for conservation management.