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  • 1
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    CTD data acquired at the OBSEA seafloor observatory from 2013 to 2014 (2022)
    PANGAEA
    Details
    Publication Date: 2024-03-13
    Description: Data from two CTD sensors (SBE37 and SBE16) deployed at OBSEA seafloor observatory from 2013 to 2014. OBSEA station is located 4km off-the-coast of Vilanova i la Geltrú (Catalonia, Spain) at a depth of 20 meters. Measured variables are sea water temperature, conductivity, pressure, salinity and sound velocity. Data from the CTD sensors has been acquired every 10 seconds, then a quality control procedure has been applied following QARTOD guidelines. Afterwards the quality controlled data has been averaged in periods of 30 minutes (discarding data flagged as bad data). Every data point has an associated a quality control flag and standard deviation value. The quality control flag values are 1: good data, 2: not applied, 3: suspicious data, 4: bad data, 9: missing data. The standard deviation provides a measure of the variability of the data within the 30min time window used in the average.
    Keywords: BITER; Conductivity; Conductivity, standard deviation; CTD; CTD, SEA-BIRD SBE16plus V2 SeaCAT; CTD, SEA-BIRD SBE 37-SMP MicroCAT; DATE/TIME; Esfuerzo conjunto entre biología y tecnología para monitorear y recuperar especies y ecosistemas impactados por la pesca: conectividad espacial e indicadores ecológicos; Event label; JERICO-S3; Joint European Research Infrastructure of Coastal Observatories: Science, Service, Sustainability; Mediterranean; OBSEA:SBE16:2013_14; OBSEA:SBE37:2013_14; oceanographic time series; Plataforma de Larga Duración para la Observación de los Ecosistemas Marinos; PLOME; Pressure, standard deviation; Pressure, water; quality control; Quality flag, conductivity; Quality flag, salinity; Quality flag, sound velocity in water; Quality flag, water pressure; Quality flag, water temperature; Salinity; Salinity, standard deviation; sea water temperatures; Sound Velocity; Sound velocity in water; Sound velocity in water, standard deviation; Temperature, water; Temperature, water, standard deviation
    Type: Dataset
    Format: text/tab-separated-values, 483492 data points
    Location Call Number Limitation Availability
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    DATA PANGAEA
  • 2
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    Meteorological data from a weather station at Sant Pere de Ribes (Catalonia, Spain) from 2013 to 2014 (2022)
    PANGAEA
    Details
    Publication Date: 2024-03-13
    Description: Data from a weather station (Garraf natural park) deployed at the Catalan coast from 2013 to 2014. The station at Garraf natural park provides solar irradiance and rain intensity. Data from the Garraf natural park station has been obtained through the Servei Meteorològic de Catalunya (Catalan Meteorological Service). An automatic quality control check has been applied to the data.
    Keywords: air temperature; Atmospheric; BITER; DATE/TIME; Esfuerzo conjunto entre biología y tecnología para monitorear y recuperar especies y ecosistemas impactados por la pesca: conectividad espacial e indicadores ecológicos; Irradiance, heat, flux density; JERICO-S3; Joint European Research Infrastructure of Coastal Observatories: Science, Service, Sustainability; meteorological data; OBSEA:GARRAF:2013_14; Plataforma de Larga Duración para la Observación de los Ecosistemas Marinos; PLOME; Precipitation; Pyranometer, Skye SKS 1110; quality control; rainfall; SKS1110; Solar irradiance; wind direction; wind speed
    Type: Dataset
    Format: text/tab-separated-values, 44565 data points
    Location Call Number Limitation Availability
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    DATA PANGAEA
  • 3
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    Meteorological data from a weather station at Vilanova i la Geltrú (Catalonia, Spain) from 2013 to 2014 (2022)
    PANGAEA
    Details
    Publication Date: 2024-03-13
    Description: Data from a weather station (Vilanova i la Geltrú) deployed at the Catalan coast from 2013 to 2014. The station at Vilanova i la Geltrú provides air temperature, wind speed and wind direction. Data from the Vilanova i la Geltrú weather station has been acquired every minute, then a quality control procedure has been applied following QARTOD guidelines. Afterwards the quality controlled data has been averaged in periods of 30 minutes (discarding data flagged as bad data). Every data point has an associated a quality control flag and standard deviation value. The quality control flag values are 1: good data, 2: not applied, 3: suspicious data, 4: bad data, 9: missing data. The standard deviation provides a measure of the variability of the data within the 30min time window used in the average.
    Keywords: air temperature; Atmospheric; BITER; DATE/TIME; Esfuerzo conjunto entre biología y tecnología para monitorear y recuperar especies y ecosistemas impactados por la pesca: conectividad espacial e indicadores ecológicos; Humidity, relative; Humidity, relative, standard deviation; JERICO-S3; Joint European Research Infrastructure of Coastal Observatories: Science, Service, Sustainability; meteorological data; OBSEA:VILANOVA:2013_14; Plataforma de Larga Duración para la Observación de los Ecosistemas Marinos; PLOME; Pressure, atmospheric; Pressure, atmospheric, standard deviation; quality control; Quality flag, air temperature; Quality flag, atmospheric pressure; Quality flag, relative humidity; Quality flag, wind direction; Quality flag, wind speed; rainfall; Solar irradiance; Temperature, air; Temperature, air, standard deviation; Weather Station, Vantage Pro2, Davis; wind direction; Wind direction; wind speed; Wind speed; Wind speed, standard deviation
    Type: Dataset
    Format: text/tab-separated-values, 464626 data points
    Location Call Number Limitation Availability
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    DATA PANGAEA
  • 4
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    Annotated images capturing fish abundances observed at the OBSEA cabled observatory from 2013 to 2014 (2022)
    PANGAEA
    Details
    Publication Date: 2024-04-20
    Description: Underwater images and abundances of different fish taxa detected at the OBSEA Cabled Observatory from January 2013 to December 2014. OBSEA station is located 4km off-the-coast of Vilanova i la Geltrú (Catalonia, Spain) at a depth of 20 meters. Two cameras were used (Sony SNC-RZ25N from 2013-01-01 to 2014-12-11 and Axis P1346-E from 2014-12-11 to 2014-12-31). 29 fish taxa have been visually identified and classified according to their taxa name.
    Keywords: Apogonidae; Atherinidae; Biodiversity; BITER; Boops boops; Chromis chromis; Conger conger; Coris julis; DATE/TIME; Dentex dentex; Digital camera, Axis P1346-E; Digital camera, Sony SNC-RZ25N; Diplodus annularis; Diplodus cervinus; Diplodus puntazzo; Diplodus sargus; Diplodus vulgaris; Epinephelus marginatus; Esfuerzo conjunto entre biología y tecnología para monitorear y recuperar especies y ecosistemas impactados por la pesca: conectividad espacial e indicadores ecológicos; Event label; fish abundance; Image; image annotation; JERICO-S3; Joint European Research Infrastructure of Coastal Observatories: Science, Service, Sustainability; Oblada melanura; OBSEA; OBSEA:CAM1:2013_14; OBSEA:CAM2:2013_14; OBSEA underwater observatory site; Pagellus sp.; Pagrus pagrus; Plataforma de Larga Duración para la Observación de los Ecosistemas Marinos; PLOME; Sarpa salpa; Sciaena umbra; Scorpaena sp.; Seriola dumerili; Serranus cabrilla; SonyAxis; SonySNC; Sparus aurata; Spicara maena; Spondyliosoma cantharus; Symphodus cinereus; Symphodus mediterraneus; Symphodus tinca; Thalassoma pavo; Total counts; Trachurus sp.; Unknown
    Type: Dataset
    Format: text/tab-separated-values, 1058720 data points
    Location Call Number Limitation Availability
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    DATA PANGAEA
  • 5
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    Annotated images capturing fish abundances during the first deployment of the EMSO Generic Instrument Module (EGIM) at the OBSEA cabled observatory from December 2016 to April 2017 (2021)
    PANGAEA
    Details
    Publication Date: 2024-04-20
    Description: Here we present fish observation data obtained during the first EGIM deployment at the OBSEA observatory, which led to the development of a methodology for correlating fish activity and biologically relevant oceanographic variables. In addition to salinity, temperature, sound speed, water depth and dissolved oxygen data measured by the EGIM, two underwater digital cameras were deployed to provide ecological observations: a CAM1 camera rotating 360° and five metres apart, and a fixed CAM2 camera pointed at an artificial reef where fish activity is observed. For the analysis, the two close cameras were considered as one. For each image, the total number of fish was counted. All visible individuals were taxonomically classified as detailed as possible, using the latest scientific nomenclature from FISHBase.
    Keywords: Apogonidae; Atherinidae; Biodiversity; Boops boops; Chromis chromis; Comment; Conger conger; Coris julis; Ctenolabrus rupestris; DATE/TIME; Dentex dentex; Digital camera; Diplodus annularis; Diplodus cervinus; Diplodus puntazzo; Diplodus sargus; Diplodus vulgaris; EGIM; EGIM_1:OBSEA:2016-12-01; EMSO; EMSODEV; EMSO Generic Instrument Module; EMSO implementation and operation: DEVelopment of instrument module; EMSO-Link; Epinephelus marginatus; European Multidisciplinary Seafloor Observation; fish abundance; Gobius vittatus; Image; image annotation; Implementation of the Strategy to Ensure the EMSO ERICs Long-term Sustainability; Labridae; Mola mola; Mugilidae; Mullus surmuletus; Muraena helena; Oblada melanura; OBSEA; OBSEA_EGIM_2017; OBSEA cabled observatory; OBSEA underwater observatory site; Pagellus sp.; Pagrus pagrus; Sarpa salpa; Sciaena umbra; Scorpaena sp.; Seriola dumerili; Serranus cabrilla; Sparus aurata; Sphyraena viridensis; Spicara maena; Spondyliosoma cantharus; Symphodus cinereus; Symphodus doderleini; Symphodus mediterraneus; Symphodus melanocercus; Symphodus ocellatus; Symphodus tinca; Thalassoma pavo; Total counts; Trachurus sp.; Unknown
    Type: Dataset
    Format: text/tab-separated-values, 51618 data points
    Location Call Number Limitation Availability
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    DATA PANGAEA
  • 6
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    Underwater camera photos with manual tagging of fish species at OBSEA seafloor observatory from 2013 to 2014 (2022)
    PANGAEA
    Details
    Publication Date: 2024-04-20
    Description: Underwater images and manual tags of different fish taxa detected from the image repository of the OBSEA Cabled Observatory from January 2013 to December 2014. OBSEA station is located 4km off-the-coast of Vilanova i la Geltrú (Catalonia, Spain) at a depth of 20 meters . Tags are rectangles marking the fish position in a picture (region of interest), identified by their x/y vertix values (in pixels).The aim of this dataset is to train Artificial Intelligence (AI) algorithms to automatically detect and or classify fish specimens from underwater pictures.Two cameras were used (Sony SNC-RZ25N from 2013-01-01 to 2014-12-11 and Axis P1346-E from 2014-12-11 to 2014-12-31). 29 fish taxa have been visually identified and classified according to their taxa name. Unclassified fish have been marked as Unknown fish.The fish taxa recognized in the dataset are: Coris julis, Chromis chromis, Diplodus vulgaris, Diplodus sargus, Oblada melanura, Spondyliosoma cantharus, Diplodus cervinus, Diplodus annularis, Spicara maena, Dentex dentex, Diplodus puntazzo, Conger conger, Symphodus mediterraneus, Atherina sp., Scorpaena sp., Pagrus pagrus, Pagellus sp., Serranus cabrilla, Sciaena umbra, Sarpa salpa, Trachurus sp., Sparus aurata, Apogon sp., Seriola dumerili, Thalassoma pavo, Epinephelus marginatus, Boops boops, Symphodus cinereus, Symphodus tinca.
    Keywords: BITER; Bounding box, x1; Bounding box, x2; Bounding box, x3; Bounding box, x4; Bounding box, y1; Bounding box, y2; Bounding box, y3; Bounding box, y4; DATE/TIME; Digital camera, Axis P1346-E; Digital camera, Sony SNC-RZ25N; Esfuerzo conjunto entre biología y tecnología para monitorear y recuperar especies y ecosistemas impactados por la pesca: conectividad espacial e indicadores ecológicos; Event label; fish diversity; fish fauna; Image; JERICO-S3; Joint European Research Infrastructure of Coastal Observatories: Science, Service, Sustainability; Mediterranean; neural networks; OBSEA; OBSEA:CAM1:2013_14; OBSEA:CAM2:2013_14; OBSEA underwater observatory site; Plataforma de Larga Duración para la Observación de los Ecosistemas Marinos; PLOME; SonyAxis; SonySNC; Species; Tagging; underwater photography
    Type: Dataset
    Format: text/tab-separated-values, 699170 data points
    Location Call Number Limitation Availability
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    DATA PANGAEA
  • 7
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    The EMSO Generic Instrument Module (EGIM): Standardized and Interoperable Instrumentation for Ocean Observation (2022)
    Frontiers Media S.A.
    Details
    Publication Date: 2022-03-21
    Description: The oceans are a fundamental source for climate balance, sustainability of resources and life on Earth, therefore society has a strong and pressing interest in maintaining and, where possible, restoring the health of the marine ecosystems. Effective, integrated ocean observation is key to suggesting actions to reduce anthropogenic impact from coastal to deep-sea environments and address the main challenges of the 21st century, which are summarized in the UN Sustainable Development Goals and Blue Growth strategies. The European Multidisciplinary Seafloor and water column Observatory (EMSO), is a European Research Infrastructure Consortium (ERIC), with the aim of providing long-term observations via fixed-point ocean observatories in key environmental locations across European seas from the Arctic to the Black Sea. These may be supported by ship-based observations and autonomous systems such as gliders. In this paper, we present the EMSO Generic Instrument Module (EGIM), a deployment ready multi-sensor instrumentation module, designed to measure physical, biogeochemical, biological and ecosystem variables consistently, in a range of marine environments, over long periods of time. Here, we describe the system, features, configuration, operation and data management. We demonstrate, through a series of coastal and oceanic pilot experiments that the EGIM is a valuable standard ocean observation module, which can significantly improve the capacity of existing ocean observatories and provides the basis for new observatories. The diverse examples of use included the monitoring of fish activity response upon oceanographic variability, hydrothermal vent fluids and particle dispersion, passive acoustic monitoring of marine mammals and time series of environmental variation in the water column. With the EGIM available to all the EMSO Regional Facilities, EMSO will be reaching a milestone in standardization and interoperability, marking a key capability advancement in addressing issues of sustainability in resource and habitat management of the oceans.
    Description: project EMSODEV (Grant agreement No 676555)
    Description: Published
    Description: 801033
    Description: 3A. Geofisica marina e osservazioni multiparametriche a fondo mare
    Description: JCR Journal
    Keywords: fixed-point observatories, multi-parametric monitoring, seafloor, water column, EMSO, EGIM, EOV ; seafloor observatories
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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    PAPER (OA)
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