GLORIA

GEOMAR Library Ocean Research Information Access

feed icon rss

Your email was sent successfully. Check your inbox.

An error occurred while sending the email. Please try again.

Proceed reservation?

Export
Filter
Document type
Keywords
Publisher
Years
  • 1
    facet.materialart.
    Unknown
    PANGAEA
    In:  Supplement to: Raes, Eric J; Bodrossy, Levente; Van De Kamp, Jodie; Bissett, Andrew; Waite, Anya M (2018): Marine bacterial richness increases towards higher latitudes in the eastern Indian Ocean. Limnology and Oceanography Letters, 3(1), 10-19, https://doi.org/10.1002/lol2.10058
    Publication Date: 2023-03-16
    Description: Abstract: We investigated the bacterial community structure in surface waters along a 2500 km transect in the eastern Indian Ocean. Using high throughput sequencing of the 16S rRNA gene we measured a significant latitudinal increase in bacterial richness from 800 to 1400 OTUs (42% increase; r2=0.65; p〈0.001) from the tropical Timor Sea to the colder temperate waters. Total dissolved inorganic nitrogen, chl a, phytoplankton community structure and primary productivity strongly correlated with bacterial richness (all p〈0.01). Our data suggest that primary productivity drives greater bacterial richness. Because, N2-fixation accounts for up to 50% of new production in this region we tested whether higher N2-fixation rates are linked to a greater nifH diversity. The nifH diversity was dominated by heterotrophic Alphaproteobacteria, Betaproteobacteria, and Gammaproteobacteria. We did not found any mechanistic links between nifH amplicon data, bacterial richness and primary productivity due to the overall low nifH evenness in this region. Scientific statement: Geographic gradients of marine microbial diversity is currently thought to be explained by two mechanisms, 1) diversity increases with increased productivity, and 2) it increases with increasing temperature. However, conclusive evidence for these mechanisms has been lacking from studies that span gradients in both, and it is unclear which organisms are responsible for the changes in diversity along these gradients. Here we present the first analysis of bacterial richness along the West Australian boundary current, the Leeuwin Current. Our analysis of bacterial richness along a latitudinal gradient in the eastern Indian Ocean shows support for the productivity mechanism rather than the temperature mechanism. Further, we show that bacterial richness increases towards the productive temperate waters are driven by productive eukaryotes (NO3- based) and heterotrophic N2-fixers.
    Keywords: AWI_BioOce; Biological Oceanography @ AWI
    Type: Dataset
    Format: application/zip, 4 datasets
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 2
    Publication Date: 2023-03-16
    Keywords: Ammonium; AWI_BioOce; Biological Oceanography @ AWI; Chlorophyll a; DATE/TIME; DEPTH, water; East Indian Ocean; Event label; Latitude of event; Longitude of event; Nitrate; Nitrate and Nitrite; Nitrite; Nitrogen, total; Nitrogen/Phosphorus ratio; Nitrogen fixation rate; Phosphate; Ratio; Salinity; Southern Surveyor; SS2012T06; SS2012T06-D1; SS2012T06-D10; SS2012T06-D11; SS2012T06-D12; SS2012T06-D13; SS2012T06-D14; SS2012T06-D15; SS2012T06-D16; SS2012T06-D17; SS2012T06-D18; SS2012T06-D19; SS2012T06-D2; SS2012T06-D20; SS2012T06-D21; SS2012T06-D22; SS2012T06-D23; SS2012T06-D24; SS2012T06-D25; SS2012T06-D26; SS2012T06-D27; SS2012T06-D28; SS2012T06-D29; SS2012T06-D3; SS2012T06-D30; SS2012T06-D31; SS2012T06-D32; SS2012T06-D33; SS2012T06-D34; SS2012T06-D35; SS2012T06-D36; SS2012T06-D37; SS2012T06-D38; SS2012T06-D39; SS2012T06-D4; SS2012T06-D40; SS2012T06-D41; SS2012T06-D42; SS2012T06-D43; SS2012T06-D45; SS2012T06-D46; SS2012T06-D47; SS2012T06-D48; SS2012T06-D49; SS2012T06-D5; SS2012T06-D6; SS2012T06-D7; SS2012T06-D8; SS2012T06-D9; Temperature, water; Water sample; WS
    Type: Dataset
    Format: text/tab-separated-values, 549 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 3
    Publication Date: 2023-03-16
    Keywords: AWI_BioOce; Bacteria, operational taxonomic unit; Bacterial (16S) richness; Biological Oceanography @ AWI; Carbon fixation rate; Chao 1 richness; Chlorophyll a; DATE/TIME; DEPTH, water; East Indian Ocean; Event label; Latitude of event; Longitude of event; Ratio; Salinity; Sample ID; Southern Surveyor; SS2012T06; SS2012T06-D1; SS2012T06-D14; SS2012T06-D20; SS2012T06-D27; SS2012T06-D3; SS2012T06-D30; SS2012T06-D32; SS2012T06-D34; SS2012T06-D40; SS2012T06-D41; SS2012T06-D45; SS2012T06-D48; SS2012T06-D6; Temperature, water; Water sample; WS
    Type: Dataset
    Format: text/tab-separated-values, 28140 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 4
    Publication Date: 2023-03-16
    Keywords: AWI_BioOce; Bacteria, operational taxonomic unit; Bacterial (16S) richness; Biological Oceanography @ AWI; Carbon fixation rate; Chao 1 richness; Chlorophyll a; DATE/TIME; DEPTH, water; East Indian Ocean; Event label; Latitude of event; Longitude of event; Nitrogen, inorganic, dissolved; Ratio; Salinity; Sample ID; Southern Surveyor; SS2012T06; SS2012T06-D1; SS2012T06-D14; SS2012T06-D20; SS2012T06-D27; SS2012T06-D3; SS2012T06-D30; SS2012T06-D32; SS2012T06-D34; SS2012T06-D40; SS2012T06-D41; SS2012T06-D45; SS2012T06-D48; SS2012T06-D6; Temperature, water; Water sample; WS
    Type: Dataset
    Format: text/tab-separated-values, 40809 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 5
    Publication Date: 2023-03-16
    Keywords: AWI_BioOce; Bacteria, operational taxonomic unit; Biological Oceanography @ AWI; DATE/TIME; DEPTH, water; East Indian Ocean; Event label; Latitude of event; Longitude of event; Southern Surveyor; SS2012T06; SS2012T06-D1; SS2012T06-D14; SS2012T06-D20; SS2012T06-D27; SS2012T06-D3; SS2012T06-D32; SS2012T06-D34; SS2012T06-D40; SS2012T06-D45; SS2012T06-D48; SS2012T06-D6; Water sample; WS
    Type: Dataset
    Format: text/tab-separated-values, 968 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 6
    facet.materialart.
    Unknown
    PANGAEA
    In:  Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven | Supplement to: Raes, Eric J; Bodrossy, Levente; Van De Kamp, Jodie; Bissett, Andrew; Ostrowski, Martin; Brown, Mark; Sow, Swan Li San; Sloyan, Bernardette; Waite, Anya M (2018): Oceanographic boundaries constrain microbial diversity gradients in the South Pacific Ocean. Proceedings of the National Academy of Sciences, 201719335, https://doi.org/10.1073/pnas.1719335115
    Publication Date: 2023-03-16
    Description: Marine microbes along with micro eukaryotes are key regulators of oceanic biogeochemical pathways. Here we present a high-resolution (every 0.5° latitude) dataset describing microbial pro- and eukaryotic diversity, in the surface and just below the thermocline, along a 7000km transect from 66° S at the Antarctic ice edge to the equator in the South Pacific Ocean. The transect, conducted in Austral winter, covered key oceanographic features including crossing of the polar front (PF), the subtropical front (STF) and the equatorial upwelling region. Our data indicate that temperature does not determine patterns of marine microbial richness, complementing the global model data from Ladau, et al. (2013). Rather, NH4⁺ nanoplankton and primary productivity were the main drivers for archaeal and bacterial richness. Eukaryote richness was highest in the least productive ocean region, the tropical oligotrophic province. We also observed a novel diversity pattern in the South Pacific Ocean; a regional increase in archaeal and bacterial diversity between 10° S and the equator. Our data showed that the mean latitudinal ranges of archaea and bacteria decreased with latitude, thereby not confirming the Rapoport's rule. We show that permanent oceanographic features, such as the STF and the equatorial upwelling can have a significant influence on pro- and eukaryotic richness.
    Keywords: AWI_BioOce; Biological Oceanography @ AWI
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 7
    Publication Date: 2023-07-17
    Keywords: Ammonia; Archaeal richness; AWI_BioOce; Bacterial richness; Biological Oceanography @ AWI; Chlorophyll a, total; DATE/TIME; DEPTH, water; Diatoms, biomass; Dinoflagellates, biomass; Elevation of event; Eukaryotic richness; Event label; IN2016-V03; IN2016-V03_100; IN2016-V03_101; IN2016-V03_102; IN2016-V03_103; IN2016-V03_104; IN2016-V03_105; IN2016-V03_106; IN2016-V03_107; IN2016-V03_108; IN2016-V03_109; IN2016-V03_11; IN2016-V03_110; IN2016-V03_111; IN2016-V03_113; IN2016-V03_114; IN2016-V03_115; IN2016-V03_116; IN2016-V03_117; IN2016-V03_118; IN2016-V03_119; IN2016-V03_12; IN2016-V03_120; IN2016-V03_121; IN2016-V03_122; IN2016-V03_123; IN2016-V03_124; IN2016-V03_125; IN2016-V03_126; IN2016-V03_127; IN2016-V03_128; IN2016-V03_129; IN2016-V03_13; IN2016-V03_130; IN2016-V03_131; IN2016-V03_132; IN2016-V03_133; IN2016-V03_134; IN2016-V03_135; IN2016-V03_136; IN2016-V03_137; IN2016-V03_138; IN2016-V03_139; IN2016-V03_140; IN2016-V03_15; IN2016-V03_17; IN2016-V03_19; IN2016-V03_2; IN2016-V03_20; IN2016-V03_21; IN2016-V03_22; IN2016-V03_23; IN2016-V03_24; IN2016-V03_25; IN2016-V03_26; IN2016-V03_27; IN2016-V03_28; IN2016-V03_29; IN2016-V03_3; IN2016-V03_30; IN2016-V03_31; IN2016-V03_32; IN2016-V03_33; IN2016-V03_34; IN2016-V03_35; IN2016-V03_36; IN2016-V03_37; IN2016-V03_38; IN2016-V03_39; IN2016-V03_4; IN2016-V03_40; IN2016-V03_41; IN2016-V03_42; IN2016-V03_43; IN2016-V03_44; IN2016-V03_45; IN2016-V03_46; IN2016-V03_47; IN2016-V03_48; IN2016-V03_49; IN2016-V03_5; IN2016-V03_50; IN2016-V03_51; IN2016-V03_52; IN2016-V03_53; IN2016-V03_54; IN2016-V03_55; IN2016-V03_56; IN2016-V03_57; IN2016-V03_58; IN2016-V03_59; IN2016-V03_6; IN2016-V03_60; IN2016-V03_61; IN2016-V03_62; IN2016-V03_64; IN2016-V03_65; IN2016-V03_66; IN2016-V03_67; IN2016-V03_68; IN2016-V03_69; IN2016-V03_70; IN2016-V03_71; IN2016-V03_72; IN2016-V03_73; IN2016-V03_74; IN2016-V03_75; IN2016-V03_76; IN2016-V03_77; IN2016-V03_78; IN2016-V03_79; IN2016-V03_8; IN2016-V03_80; IN2016-V03_81; IN2016-V03_82; IN2016-V03_84; IN2016-V03_85; IN2016-V03_86; IN2016-V03_87; IN2016-V03_88; IN2016-V03_89; IN2016-V03_9; IN2016-V03_90; IN2016-V03_91; IN2016-V03_92; IN2016-V03_93; IN2016-V03_94; IN2016-V03_95; IN2016-V03_96; IN2016-V03_97; IN2016-V03_98; IN2016-V03_99; Investigator (2014); Latitude of event; Longitude of event; Mixed layer depth; Nitrate; Nitrite; Oxygen; Phosphate; Photoperiod, hours of daylight; Primary production; Ratio; Salinity; Sample code/label; Silicate; South Pacific Ocean; Temperature, water; Water sample; WS
    Type: Dataset
    Format: text/tab-separated-values, 2693 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 8
    Publication Date: 2023-07-17
    Keywords: Ammonia; Archaeal richness; AWI_BioOce; Bacterial richness; Biological Oceanography @ AWI; Chlorophyll a, total; DATE/TIME; DEPTH, water; Diatoms, biomass; Dinoflagellates, biomass; Elevation of event; Eukaryotic richness; Event label; IN2016-V03; IN2016-V03_100; IN2016-V03_101; IN2016-V03_102; IN2016-V03_103; IN2016-V03_104; IN2016-V03_105; IN2016-V03_106; IN2016-V03_107; IN2016-V03_108; IN2016-V03_109; IN2016-V03_11; IN2016-V03_110; IN2016-V03_111; IN2016-V03_113; IN2016-V03_114; IN2016-V03_115; IN2016-V03_116; IN2016-V03_117; IN2016-V03_118; IN2016-V03_119; IN2016-V03_12; IN2016-V03_120; IN2016-V03_121; IN2016-V03_122; IN2016-V03_123; IN2016-V03_124; IN2016-V03_125; IN2016-V03_126; IN2016-V03_127; IN2016-V03_128; IN2016-V03_129; IN2016-V03_13; IN2016-V03_130; IN2016-V03_131; IN2016-V03_132; IN2016-V03_133; IN2016-V03_134; IN2016-V03_135; IN2016-V03_136; IN2016-V03_137; IN2016-V03_138; IN2016-V03_139; IN2016-V03_140; IN2016-V03_15; IN2016-V03_17; IN2016-V03_19; IN2016-V03_2; IN2016-V03_20; IN2016-V03_21; IN2016-V03_22; IN2016-V03_23; IN2016-V03_24; IN2016-V03_25; IN2016-V03_26; IN2016-V03_27; IN2016-V03_28; IN2016-V03_29; IN2016-V03_3; IN2016-V03_30; IN2016-V03_31; IN2016-V03_32; IN2016-V03_33; IN2016-V03_34; IN2016-V03_35; IN2016-V03_36; IN2016-V03_37; IN2016-V03_38; IN2016-V03_39; IN2016-V03_4; IN2016-V03_40; IN2016-V03_41; IN2016-V03_42; IN2016-V03_43; IN2016-V03_44; IN2016-V03_45; IN2016-V03_46; IN2016-V03_47; IN2016-V03_48; IN2016-V03_49; IN2016-V03_5; IN2016-V03_50; IN2016-V03_51; IN2016-V03_52; IN2016-V03_53; IN2016-V03_54; IN2016-V03_55; IN2016-V03_56; IN2016-V03_57; IN2016-V03_58; IN2016-V03_59; IN2016-V03_6; IN2016-V03_60; IN2016-V03_61; IN2016-V03_62; IN2016-V03_64; IN2016-V03_65; IN2016-V03_66; IN2016-V03_67; IN2016-V03_68; IN2016-V03_69; IN2016-V03_70; IN2016-V03_71; IN2016-V03_72; IN2016-V03_73; IN2016-V03_74; IN2016-V03_75; IN2016-V03_76; IN2016-V03_77; IN2016-V03_78; IN2016-V03_79; IN2016-V03_8; IN2016-V03_80; IN2016-V03_81; IN2016-V03_82; IN2016-V03_84; IN2016-V03_85; IN2016-V03_86; IN2016-V03_87; IN2016-V03_88; IN2016-V03_89; IN2016-V03_9; IN2016-V03_90; IN2016-V03_91; IN2016-V03_92; IN2016-V03_93; IN2016-V03_94; IN2016-V03_95; IN2016-V03_96; IN2016-V03_97; IN2016-V03_98; IN2016-V03_99; Investigator (2014); Latitude of event; Longitude of event; Mixed layer depth; Nitrate; Nitrite; Oxygen; Phosphate; Photoperiod, hours of daylight; Primary production; Ratio; Salinity; Sample code/label; Silicate; South Pacific Ocean; Temperature, water; Water sample; WS
    Type: Dataset
    Format: text/tab-separated-values, 2657 data points
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 9
    Publication Date: 2018-11-07
    Description: Cyanobacteria-dominated biofilms in a CO2-degassing karst-water creek (Westerhöfer Bach, Germany) were investigated with regard to the effects of microbial activity on CaCO3 precipitation, water chemistry of micro- and macroenvironments, stable isotopic records, and tufa fabric formation. Ex situ microelectrode measurements of pH, O2, Ca2+ and CO32− revealed that annually laminated calcified biofilms composed mainly of filamentous cyanobacteria (tufa stromatolites) strongly induced CaCO3 precipitation by photosynthesis under illumination, but inhibited precipitation by respiration in the dark. In contrast, endolithic cyanobacterial biofilms and mosses did not cause photosynthesis-induced precipitation under experimental conditions. No spontaneous precipitation occurred on bare limestone substrates, despite high calcite supersaturation of the ambient water. Mass balance calculations suggest that biofilm photosynthesis was responsible for 10–20% of Ca2+ loss in the creek, while the remaining Ca2+ loss derived from physicochemical precipitation on branches, leaves and as fine-grained calcite particles. Neither analysis of bulk water chemistry nor oxygen nor carbon stable isotopic records of the tufa stromatolites confirmed photosynthetic effects, despite the evident photosynthesis-induced calcite precipitation. Oxygen stable isotopic values reflected seasonal changes in water temperature, and carbon stable isotope values probably recorded carbon isotopic composition of dissolved inorganic carbon in the creek water. Annual lamination and fabric formation of the tufa stromatolites is suggested to vary with photosynthesis-induced calcite precipitation rates that are affected by temperature dependency of diffusion coefficients. Photosynthesis-induced precipitation resulted in encrusted cyanobacterial sheaths, reflecting syntaxial overgrowth of microcrystalline cyanobacterial tubes by microspar, instead of microcrystalline sheath impregnation, which was previously suggested as an indicator of photosynthesis-induced precipitation. Therefore, sheath impregnation or encrustation by CaCO3 cannot be used to distinguish photosynthesis-induced from physicochemically-induced CaCO3 precipitation.
    Type: Article , PeerReviewed
    Format: text
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
  • 10
    Publication Date: 2022-05-30
    Description: Unravelling the relationship between biological diversity and ecosystem resilience is a timeless topic dating back to Alexander von Humboldt’s expeditions in the early 19th century. While global oceanographic expeditions and basin-wide transects show positive correlations between microbial diversity and temperature or productivity, they often lack temporal replication, and include few high latitude observations especially during winter months. Here, using seasonal amplicon sequence data from six time-series in the northern and southern hemispheres, we show that on a multiannual basis marine microbial alpha-diversity (species richness and evenness) correlate most strongly with day length, rather than with temperature and chlorophyll a (as proxy for primary production), independent of the targeted 16S rRNA hypervariable region. By integrating data from 2003 to 2020, our evidence suggests that microbial diversity and annually recurring community composition are governed by similar principles, from subtropic to polar oceans. These global trends are consistent regardless of the collection methods, DNA extraction chemistry, sequencing technologies or bioinformatic pipelines. Hence, to understand drivers of marine microbial diversity, larger-scale studies need to embed their analyses into the context of regional seasonal variations. Overall, our synthesis reframes the fundamental drivers of marine microbial diversity as phenological, and suggests that although the state of the temperature and chlorophyll spectra should be considered, it is regular sampling over seasonal cycles that can disentangle these effects. Our findings support the idea that microbial diversity patterns and ecosystem stability are regulated by holistic feedback systems. Or as Alexander von Humboldt already stated, Nature is interconnected, linking ‘the little things’ with global interactions and patterns will allow us to place the observed microbial diversity into the bigger picture.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Conference , notRev
    Location Call Number Limitation Availability
    BibTip Others were also interested in ...
Close ⊗
This website uses cookies and the analysis tool Matomo. More information can be found here...