Description: We report on the succession of selective degradation of dinoflagellate cyst species that can be considered representative for discrete particulate organic matter (POM) classes of different degradability. The effects of anaerobic and aerobic degradation as well as bioturbation in a natural setting are documented in high resolution by means of palynological and geochemical analyses on Madeira Abyssal Plain A- and F-turbidites. These turbidites are unique as their initial ungraded sediments are affected by a downward penetrating oxydation front. The dataset covers the density, porosity, water content and dinoflagellate cysts content of sediments from the so called A- and F-turbidite.

Description: Assessment of selective preservation is of prime importance for the interpretation of proxies. Zonneveld et al. (1997) demonstrated strong selective changes in dinocyst assemblages as a result of aerobic degradation in the MAP F-turbidite. Based on two sets of 3 samples only, this did not allow much further differentiation. The present study relates palynological with geochemical changes at the transition from anoxic to oxic conditions in MAP turbidites with a high, 0.5-1 cm resolution. We now can understand why the geochemical processes already modify the peridinioid component of the dinoflagellate assemblage in the anoxic zone below the oxidation front, and why they lead to increasing cyst concentrations for some species close to the front. We demonstrate how taxon-specific differences in cyst degradation lead to successive dominance of Brigantedinium, Spiniferites and Impagidinium when degradation proceeds. We show the importance of knowledge of selective preservation by interpreting the assemblages with and without taking this process into account.

Description: Post-depositional sedimentary dinoflagellate cyst associations undergo species-selective degradation under oxic conditions. However, there is little known about the temporal relationship between oxygen concentration and bulk dinocyst degradation rate over the time scale of several years, and if this degradation is mainly microbial or chemical. Whilst the overall sensitivity of heterotrophic dinoflagellate cysts is well documented, sensitivity differences within this group have not been studied. Here we examine the rates of cyst degradation of heterotrophic species over short temporal scales across an anoxic–oxic gradient. Sediment with a known dinoflagellate cyst association largely dominated by heterotrophic dinoflagellates, were connected to trap arrays at two different locations, Cap Blanc (NW Africa) and Gotland Basin (central Baltic Sea) and exposed to four different ambient oxygen concentrations representing a complete oxic gradient from 5.1 mL/L to sulphate bearing anoxic waters. Two treatments of either gauze or dialyse membrane in triplicate were established to investigate the effects of chemical or bacterial degradation. Cyst loss was significant at oxic settings, rapidly occurring within the first year of exposure (32%) whereas no significant degradation was observed for suboxic and anoxic exposures. Compiling the degradation rates of individual species under the different exposure settings reveals an overall species sensitivity ranking amongst cysts of heterotrophic species. Species of average resistance: Bitectatodinium spongium, Brigantedinium spp., Echinidinium spp., Echinidinium aculeatum, and Gymnodinium trapeziforme. Species more resistant than average: Stelladinium robustum and Trinovantedinium applanatum. We observe that oxic degradation of cysts of heterotrophic dinoflagellates is fast and selective with maximal cyst association changes during the first year of oxic exposure. These aspects have to be taken into account in palaeoenvironmental and palaeoceanographic reconstructions where bottom/pore water conditions of the upper sediments are oxygenated.

Description: We report on the succession of selective degradation of dinoflagellate cyst species that can be considered representative for discrete particulate organic matter (POM) classes of different degradability. The effects of anaerobic and aerobic degradation as well as bioturbation in a natural setting are documented in high resolution by means of palynological and geochemical analyses on Madeira Abyssal Plain A- and F-turbidites. These turbidites are unique as their initial ungraded sediments are affected by a downward penetrating oxydation front. Geochemical analyses document the presence of an active downward penetrating oxidation front in the A turbidite, and a palaeo-oxidation front in the F-turbidite. In this latter turbidite, several zones can be distinguished from top to bottom: an oxidised bioturbated zone, an oxidised but not-bioturbated zone, a visible paleooxidation front, and a narrow nitrogenous zone overlying unoxidised sediments. We are the first to report that anaerobic degradation within the nitrogenous zones in both turbidites affects cysts of some heterotrophic dinoflagellates. The cyst species affected (Echinidinium aculeatum, Echinidinium spp., cysts of Protoperidinium monospinum and Brigantedinium spp.) exponentially decrease in this zone that is further characterised by a strong decrease in sulphur content due to sulphide oxidation. Degradation rates are different for each species. These cysts of heterotrophic dinoflagellates consist of a nitrogen-rich glycan in contrast to the cellulosic cysts walls of phototrophic dinoflagellates. Therefore, our observation supports the hypothesis that the quality of organic matter plays an important role in OM degradation in oxygen deficient environments with N-rich OM being more labile than other components in these environments. All heterotrophic species are strongly affected by aerobic degradation with their cyst concentrations exponentially decreasing with increasing oxygen exposure. Degradation rates vary between species and range von highly degradable to slightly degradable. Most strongly affected are cysts of Protoperidinium monospinum, Brigantedinium spp., and Echinidinium spp. Increasingly less affected are: Selenopemphix nephroides, Selenopemphix quanta, other Peridinioids and Echinidinium aculeatum. An effect of aerobic degradation on photosynthetic species could only be observed for Pentapharsodinium dalei. All Impagidinium species appeared to be resistant to aerobic degradation. Despite having analysed only a limited number of samples in the bioturbated zone of the F-turbidite, we have strong indications that the bioturbation can lead to the degradation of POM that is not affected by aerobic degradation alone. The cyst species Spiniferites ramosus, Impagidinium paradoxum, Lingulodinium machaerophorum, Nematosphaeropsis labyrinthus, Spiniferites spp., Impagidinium sphaericum, Spiniferites elongates and Spiniferites mirabilis do not show concentration changes in the non-bioturbated aerobic sediments but their concentrations are considerably decreased in the bioturbated part of the F-turbidite. This supports the hypothesis that bioturbation can increase the degradation of POM by e.g. increasing oxygen exposure time and/or by an alteration of aerobic and anaerobic conditions. We furthermore show that the degradation rates of POM components represented by individual cyst species differ between zones with different redox and biological conditions. This implies that POM degradation reaction rate coefficients are environment dependent. Our observation that dinoflagellate cyst species have different degradation rates ranging from extremely labile to extremely recalcitrant within the individual redox/bioturbation zones supports the hypothesis that cyst walls have a species specific molecular structure. Our results support continuum models of organic matter degradation that assume a continuous distribution of organic matter reactivity.

Description: Corrigendum: Dissecting a circuit for olfactory behaviour in Caenorhabditis elegans Nature 533, 7601 (2016). doi:10.1038/nature16515 Authors: Sreekanth H. Chalasani, Nikos Chronis, Makoto Tsunozaki, Jesse M. Gray, Daniel Ramot, Miriam B. Goodman & Cornelia I. Bargmann Nature450, 63–70 (2007); doi:10.1038/nature06292corrigendum Nature451, 102 (2008); doi:10.1038/nature06540We have discovered that Figs 1, 2, 3 and 5 and Supplementary Figs 1–5 and 7 of this Article were generated from

Description: Mitochondrial glutathione (GSH) is a key endogenous antioxidant and its maintenance is critical for cell survival. Here, we generated stable NSC34 motor neuron-like cell lines overexpressing the mitochondrial GSH transporter, the 2-oxoglutarate carrier (OGC), to further elucidate the importance of mitochondrial GSH transport in determining neuronal resistance to oxidative stress. Two stable OGC cell lines displayed specific increases in mitochondrial GSH content and resistance to oxidative and nitrosative stressors, but not staurosporine. Inhibition of transport through OGC reduced levels of mitochondrial GSH and re-sensitized the stable cell lines to oxidative stress. The stable OGC cell lines displayed significant upregulation of the anti-apoptotic protein, Bcl-2. This result was reproduced in parental NSC34 cells by chronic treatment with GSH monoethylester, which specifically increased mitochondrial GSH levels. Knockdown of Bcl-2 expression decreased mitochondrial GSH and re-sensitized the stable OGC cells to oxidative stress. Finally, endogenous OGC was co-immunoprecipitated with Bcl-2 from rat brain lysates in a GSH dependent manner. These data are the first to show increased mitochondrial GSH transport is sufficient to enhance neuronal resistance to oxidative stress. Moreover, sustained and specific enhancement of mitochondrial GSH leads to increased Bcl-2 expression, a required mechanism for the maintenance of increased mitochondrial GSH levels. This article is protected by copyright. All rights reserved.