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  • 1
    Online Resource
    Online Resource
    Dordrecht :Springer Netherlands,
    Keywords: Microbiology. ; Parasitology. ; Electronic books.
    Type of Medium: Online Resource
    Pages: 1 online resource (387 pages)
    Edition: 1st ed.
    ISBN: 9789400773059
    Series Statement: Subcellular Biochemistry Series ; v.74
    DDC: 616.9363016
    Language: English
    Note: Intro -- Editorial -- Contents -- Chapter 1: Biology of Human Pathogenic Trypanosomatids: Epidemiology, Lifecycle and Ultrastructure -- 1 Introduction -- 2 Epidemiology, Clinical Manifestations and Chemotherapy -- 2.1 Leishmania and Leishmaniasis -- 2.2 T . cruzi and Chagas Disease -- 2.3 T . brucei and Sleeping Sickness -- 3 Lifecycle -- 3.1 Leishmania spp. -- 3.2 T . cruzi -- 3.3 T . brucei -- 4 Ultrastructure -- 4.1 Plasma Membrane and Cell Surface -- 4.2 Cytoskeleton -- 4.3 Flagellum -- 4.4 Mitochondrion and Kinetoplast -- 4.5 Glycosomes -- 4.6 Acidocalcisomes -- 4.7 Contractile Vacuole -- 4.8 Endocytic Pathway -- 5 Conclusions -- References -- Chapter 2: Selection of Molecular Targets for Drug Development Against Trypanosomatids -- 1 Introduction -- 2 Essential and Desirable Criteria for the Selection of a Trypanosomatid-Specific Drug Target -- 3 Computational Approaches that Aid Drug Target Prioritization -- 4 Examples of Putative or Validated Drug Targets in Parasitic Metabolic and Signaling Pathways -- 4.1 Glycolysis -- 4.2 Purine Salvage Pathway -- 4.3 The Trypanothione System -- 4.4 Sterol Biosynthesis -- 4.5 Pteridine Metabolism -- 4.6 Drug Targets in Signaling and Other Pathways Essential for Parasitic Survival -- 4.6.1 Topoisomerases -- 4.6.2 Proteases -- 4.6.3 Kinases -- 5 Investigating Drug Repurposing Opportunities for Drug Target Identification and for Antiparasitic Drug Discovery -- 6 Concluding Remarks -- References -- Chapter 3: A2 and Other Visceralizing Proteins of Leishmania : Role in Pathogenesis and Application for Vaccine Development -- 1 Leishmania Parasites -- 2 Human Leishmaniasis -- 3 Canine Visceral Leishmaniasis and Control of Zoonotic Visceral Leishmaniasis -- 4 Immune Responses in Leishmaniasis -- 5 Genes and Molecules Associated to Visceralization in Leishmaniasis -- 5.1 A2 as a Prototype Species-Specific Gene. , 5.1.1 L . donovani A2 Genomic Organization -- 5.1.2 Regulation of A2 Expression -- 5.1.3 Role of A2 in Visceral Disease -- 5.2 Other Visceralizing Proteins -- 5.3 Application of Species-Specific Genes for Vaccine Design: A2 as a Vaccine Antigen -- 5.3.1 Other Applications of A2 -- 6 Conclusion -- References -- Chapter 4: Arginase in Leishmania -- 1 The Arginase Pathway -- 2 Arginase's Role in Host Defense During Leishmania Infection -- 3 Arginase's Role in Leishmania Physiology -- 4 Arginine Trafficking Through Leishmania -Infected Macrophages -- 5 Concluding Remarks -- References -- Chapter 5: The Heat Shock Proteins of Trypanosoma cruzi -- 1 The Cellular Stress Response -- 2 Environmental Stresses Associated with T . cruzi 's Life Cycle -- 3 Genome Organization and Gene Expression in T . cruzi -- 4 Heat Shock Proteins -- 4.1 Heat Stress in T . cruzi -- 4.1.1 HSP100 Family -- 4.1.2 HSP90 Family -- 4.1.3 HSP70 Family -- 4.1.4 HSP40 Family -- 4.1.5 Chaperonin Family -- 4.1.6 Small HSP Family -- 5 Conclusions -- References -- Chapter 6: The gp82 Surface Molecule of Trypanosoma cruzi Metacyclic Forms -- 1 Introduction -- 2 High Conservation of Gp82 Sequence Among T . cruzi Strains from Divergent Genetic Groups -- 3 The Structural Basis of Cell Binding Property of Gp82 -- 4 Gastric Mucin-Binding Property of Gp82 and MT Migration -- 5 Ca 2+ Signal-Inducing Activity of Gp82 and Target Cell Lysosome Exocytosis -- 6 Inhibitory Effect of Gp82 on Cell Invasion by Enteroinvasive Escherichia coli (EIEC) -- 7 Apoptotic Cell Death-Inducing Activity of Gp82 Toward Melanoma Cells -- 8 Immunogenic Property of Gp82 -- 9 Distinctive Properties of MT Gp82 and TCT Surface Molecule Tc85-11 -- 10 Concluding Remarks -- References -- Chapter 7: The Gp85 Surface Glycoproteins from  Trypanosoma cruzi -- 1 Introduction: General Considerations on the Variability of the Infection. , 2 Involvement of Gp85 Glycoproteins in T . cruzi Infection -- 2.1 Gp85 Glycoproteins: GPI and Carbohydrate Structure of Tc85 -- 2.2 Gp85/TS Glycoproteins: Multigene Family -- 2.3 Gp85/TS Superfamily: Genomic and Functional Signature Motifs -- 2.3.1 Grouping the Gp85/TS Gene Superfamily: General Structure -- 2.3.2 Gp85 Glycoproteins Family: Tc85 Adhesion to ECM and Ensuing Post-translational Modifications in T. cruzi Proteins -- Tc85 Adhesion to ECM Elements -- Post-translational Modification of T. cruzi Proteins Due to the Adhesion of Trypomastigotes to Laminin and Fibronectin -- 2.3.3 Role of the Conserved FLY Motif -- Identification of FLY as a Cell-Binding Domain -- Mechanism of FLY Potentiation of T. cruzi Infection -- Role of the FLY Motif in T . cruzi Tissue Tropism -- The Host Immune Response to FLY -- 3 Concluding Remarks -- References -- Chapter 8: Trypanosoma cruzi Trans -Sialidase: Structural Features and Biological Implications -- 1 Introduction -- 2 Structure and Catalytic Mechanism of TcTS -- 2.1 TcTS Substrate Specificity -- 3 Trypanosoma cruzi Trans -Sialidase Superfamily (TSs) -- 3.1 TcTS and Its Role in Host Parasite Interaction -- 4 Conclusions -- References -- Chapter 9: Surface Topology Evolution of Trypanosoma Trans -Sialidase -- 1 Origin and Evolution of Trypanosoma Trans -Sialidase (TS) -- 2 Surface Diversity of Trypanosoma TS -- 2.1 TS Family -- 2.2 TS-Like Family -- 3 Post-Genomic T . cruzi TS Gene Organization -- 4 Surface Expression Changes and TS Multifunctionality -- 5 Towards Surface Topology Drug Design of T . cruzi TS -- 5.1 Sialic Acid -- 5.2 Galactose -- 6 Conclusion -- References -- Chapter 10: Ecto-nucleotidases and Ecto-phosphatases from Leishmania and Trypanosoma Parasites -- 1 Introduction -- 2 Ecto-Nucleotidases -- 2.1 Acquisition of Purine by Trypanosomatids: The Salvage Pathway. , 2.2 Extracellular Nucleotides: Purinergic Signaling in the Immune System -- 2.2.1 The Discovery of a Purinergic Signaling Pathway -- 2.2.2 Purinergic Receptors -- 2.2.3 Purinergic Signaling and the Immune System -- 2.3 General Properties of Ecto-nucleotidases -- 2.3.1 Ecto-nucleoside Triphosphate Diphosphohydrolases (E-NTPDases) -- 2.3.2 Ecto-5′Nucleotidase (Ecto-5′NT) -- 2.3.3 Ecto-3′Nucleotidase/Nuclease (Ecto-3′NT/NU) -- 2.4 Evidence of Ecto-nucleotidases in Leishmania and Trypanosoma Species -- 2.4.1 Molecular Evidences for Occurrence of E-NTPDase -- 2.4.2 Reports and Biochemical Characterization of E-NTPDase Activities -- 2.4.3 The Contribution of Ecto-nucleotidases in Purine Acquisition -- 2.4.4 Possible Roles of Ecto-nucleotidases in Virulence -- 2.4.5 Ecto-nucleotidases Modulating the Host Immune Response -- 3 Ecto-phosphatases -- 3.1 The Role of Phosphatases and Kinases in Regulation by Phosphorylation -- 3.2 Classification of Phosphatases -- 3.2.1 Substrate Specificity -- 3.2.2 Optimum pH -- 3.2.3 Subcellular Localization -- 3.3 Uptake of Inorganic Phosphate -- 3.4 Evidence of Ecto-phosphatases in Leishmania and Trypanosoma Species -- 3.4.1 Identification and Localization of Membrane-Bound or Secreted Phosphatase Activities -- 3.4.2 Modulators of Ecto-phosphatase Activities: Classical Inhibitors, Divalent Metals and Pi -- 3.4.3 Ecto-phosphatases as Virulence Markers: Possible Roles in Adhesion and Survival of Parasites in Host Cells -- 4 Conclusions -- References -- Chapter 11: GP63 Function in the Interaction of Trypanosomatids with the Invertebrate Host: Facts and Prospects -- 1 GP63 in Leishmania, Phytomonads and Monoxenic Trypanosomatids -- 2 GP63 in T. cruzi, T. brucei and T. rangeli -- 3 Concluding Remarks -- References -- Chapter 12: Highlights on Trypanosomatid Aminoacyl-tRNA Synthesis -- 1 Introduction. , 2 Aminoacyl-tRNA Synthetases -- 3 Aminoacyl-tRNA Synthesis -- 4 The Diversity of the Aminoacylation System in Trypanosomatids -- 4.1 Direct tRNA Aminoacylation Pathways in Trypanosomatids -- 4.1.1 Aspartyl-tRNA Synthetase -- 4.1.2 Glutaminyl-tRNA Gln and Glutamyl-tRNA Glu Synthesis -- 4.1.3 Histidyl-tRNA Synthetase -- 4.1.4 Isoleucyl-tRNA Synthetase -- 4.1.5 Lysyl-tRNA Synthetase -- 4.1.6 Methionyl-tRNA Synthetase -- 4.1.7 Seryl-tRNA Synthetase -- 4.1.8 Tryptophanyl-tRNA Synthetase -- 4.1.9 Tyrosyl-tRNA Synthetase -- 4.2 tRNA Dependent Aminoacyl-tRNA Synthesis -- 4.2.1 Indirect Routes to Gln-tRNA Gln and Asn-tRNA Asn Formation -- 4.2.2 Formylmethionyl-tRNA Synthesis -- 4.2.3 The Selenocysteinyl-tRNA Formation Pathway -- 5 Trypanosomal Aminoacyl-tRNA Synthesis as a Target for Antibiotics -- 6 Conclusions -- References -- Chapter 13: The Expected Outcome of the Trypanosoma cruzi Proteomic Map: A Review of Its Potential Biological Applications for Drug Target Discovery -- 1 State of the Art -- 2 T. cruzi Proteomic Map: An Overview -- 2.1 Sylvatic Isolates -- 2.2 Sub-Cellular Fractions -- 2.3 Post-Translational Modifications -- 3 Susceptibility and Drug Resistance -- 4 Molecular Candidates for Drug Interventions and Vaccine Development -- 5 Chagas Disease Chemotherapy: Challenges and Perspectives -- 6 Concluding Remarks -- References -- Chapter 14: Proteomics Advances in the Study of  Leishmania Parasites and Leishmaniasis -- 1 Proteomics Technologies Applied to the Study of Leishmania Parasites -- 2 Comparative Proteomic Analysis Between Promastigote and Amastigote Stages of Leishmania spp -- 3 The Importance of Post-Translational Modifications (PTMs) for Leishmania Differentiation -- 4 Proteome of Leishmania Cell Fractions -- 5 Secretome -- 6 Proteomics as a Tool for Mapping Drug Resistance in Leishmania. , 7 Proteomic Analysis of Leishmania Antigens and Vaccine Candidates.
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  • 2
    Publication Date: 2023-01-13
    Description: Rock samples for TOC were dried at 40 ºC and then grounded to a fine powder with subsequent carbonate dissolution with HCl and organic-carbon combustion using a LECO WR 112 Carbon Analyser.
    Keywords: Carbon, organic, total; Carbon analyser, LECO; Depth, well; Espirito_Santo_Basin; Late Cretaceous; Milankovitch forcing; orbital tuning; South Atlantic; western South Atlantic
    Type: Dataset
    Format: text/tab-separated-values, 1026 data points
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  • 3
    Publication Date: 2023-01-13
    Description: Well-log data was acquired in a Late Cretaceous section of the Espírito Santo basin (western South Atlantic). Cyclostratigraphic techniques were used to explore the eventual pacing of orbital cycles in the deposition of sequences. The frequency ratio method was used to interpret the orbital cycles and based on this a long-eccentricity signal was interpreted and extracted to create a floating time-scale. Using a seismic horizon associated Cretaceous-Paleogene transition, a strong shift in the natural gamma-ray data was anchored to an age of 66.0 Ma producing an anchored astronomical time-scale placed between late Albian and early Ypresian.
    Keywords: Late Cretaceous; Milankovitch forcing; orbital tuning; South Atlantic
    Type: Dataset
    Format: application/zip, 4 datasets
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  • 4
    Publication Date: 2023-02-07
    Keywords: Carbon, organic, total; Carbon analyser, LECO; Density, dry bulk; DEPTH, sediment/rock; Espirito_Santo_Basin; Late Cretaceous; Milankovitch forcing; orbital tuning; Paleoproductivity as carbon; Sedimentation rate; South Atlantic; western South Atlantic
    Type: Dataset
    Format: text/tab-separated-values, 1988 data points
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  • 5
    Publication Date: 2023-02-08
    Description: HI derives from Rock-Eval pyrolysis using 100 mg of grounded and powdered rock within a Rock-Eval 6 device.
    Keywords: DEPTH, sediment/rock; Espirito_Santo_Basin; Hydrogen index; Late Cretaceous; Milankovitch forcing; orbital tuning; Rock-Eval analysis; South Atlantic; western South Atlantic
    Type: Dataset
    Format: text/tab-separated-values, 147 data points
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  • 6
    Publication Date: 2023-03-01
    Description: NGR is a geophysical acquisition made by Petrobras at the time of well drilling. Petrobras acquired natural gamma-ray (NGR) data for well ES-1 measured between 1880.6 and 5405.7 m.
    Keywords: -; AGE; Depth, well; Espirito_Santo_Basin; Filtered NGR; Frequency ratio method; Late Cretaceous; Milankovitch forcing; Natural gamma ray; orbital tuning; Sedimentation rate; SEIS; Seismic; South Atlantic; western South Atlantic
    Type: Dataset
    Format: text/tab-separated-values, 560279 data points
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  • 7
    Publication Date: 2021-09-02
    Description: In this interim report, the studies on geothermal fluids carried out in Turkey, France and Iceland geothermal fields are explained.
    Language: English
    Type: info:eu-repo/semantics/report
    Format: application/pdf
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  • 8
    Publication Date: 2023-01-21
    Description: Deliverable D2.4 reports on the activities performed within Task 2.4 “Thermophysical properties of geothermal fluids” until the end of month 36 of the REFLECT project. The task breaks down into three subtasks of different scope: Task 2.4.1 - In situ measurements of fluid thermophysical properties, Task 2.4.2 - Thermoelectrical properties, and Task 2.4.3 - Modelling of density and heat capacity. Overall, a better understanding of the thermophysical properties of highly saline geothermal fluids was obtained by a combination of analytical data evaluation, improvement of measurement devices, laboratory measurements and numerical modelling.
    Language: English
    Type: info:eu-repo/semantics/report
    Format: application/pdf
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  • 9
    Publication Date: 2020-02-12
    Keywords: 550 - Earth sciences
    Type: info:eu-repo/semantics/conferenceObject
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  • 10
    Publication Date: 2020-02-12
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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