Description: Chemical disparities at the interface between subducting oceanic crustal rocks and the harzburgitic mantle lead to the formation of reaction zones in the mantle above the subducting slabs composed of hybrid rocks that may carry exotic trace-element patterns and isotopic signatures. Subsequent burial of these metasomatised rocks as part of the progressively subducted slab could deliver trace elements and volatiles to the source region of arc magma. A natural laboratory to study reactions at the slab–mantle interface maybe found in exhumed high-pressure mélanges, where sedimentary, mafic and ultramafic lithologies are juxtaposed and metamorphosed at high-P/T conditions. A mélange zone of that type is found in northern Syros, where metasomatic reaction zones (“blackwalls”) formed on a metre scale at the contact of metasedimentary blueschists and serpentinite. Five different zones within such a contact display the assemblages (I) glaucophane+garnet+phengite+epidote, (II) glaucophane+epidote+chlorite, (III) chlorite+epidote+omphacite±albite (IV) chlorite±titanite±rutile±apatite and (V) serpentine+chromite. Accessory phases, such as apatite, allanite, rutile, titanite, tourmaline, zircon and monazite are abundant in zones II to IV. The observed succession of assemblages together with whole-rock major and trace-element compositions reflect the two dominant processes that are thought to have operated along the lithological contact: (A) diffusion of chemical components driven by the compositional contrast of the juxtaposed rocks, and (B) flux of hydrous fluids along the contact, which depleted (e.g., LILE, SiO2) or enriched (e.g., B, LREE) certain elements in various zones. Thermodynamic modelling is able to closely predict the succession of mineral assemblages as they are expected from diffusion of Mg and Ca across the contact zone. Employed to various P–T conditions and different juxtaposed rock types, this type of modelling could be used to access and evaluate larger portions of the subduction system. Our results support existing models that suggest that mixing and redistribution of major and trace elements in subduction zones may be related to the formation of hybrid rocks in mélange zones

Description: Acetone is one of the most abundant oxygenated volatile organic compounds (VOCs) in the atmosphere. The oceans impose a strong control on atmospheric acetone, yet the oceanic fluxes of acetone remain poorly constrained. In this work, the global budget of acetone is evaluated using two global models: CAM‐chem and GEOS‐Chem. CAM‐chem uses an online air‐sea exchange framework to calculate the bidirectional oceanic acetone fluxes, which is coupled to a data‐oriented machine‐learning approach. The machine‐learning algorithm is trained using a global suite of seawater acetone measurements. GEOS‐Chem uses a fixed surface seawater concentration of acetone to calculate the oceanic fluxes. Both model simulations are compared to airborne observations from a recent global‐scale, multiseasonal campaign, the NASA Atmospheric Tomography Mission (ATom). We find that both CAM‐chem and GEOS‐Chem capture the measured acetone vertical distributions in the remote atmosphere reasonably well. The combined observational and modeling analysis suggests that (i) the ocean strongly regulates the atmospheric budget of acetone. The tropical and subtropical oceans are mostly a net source of acetone, while the high‐latitude oceans are a net sink. (ii) CMIP6 anthropogenic emission inventory may underestimate acetone and/or its precursors in the Northern Hemisphere. (iii) The MEGAN biogenic emissions model may overestimate acetone and/or its precursors, and/or the biogenic oxidation mechanisms may overestimate the acetone yields. (iv) The models consistently overestimate acetone in the upper troposphere‐lower stratosphere over the Southern Ocean in austral winter. (v) Acetone contributes up to 30–40% of hydroxyl radical production in the tropical upper troposphere/lower stratosphere.

Description: Highlights: • All 3 animal MAPR families, PGRMC, NENF & NEUFC, were present in the common opisthokont ancestor. • Y-phosphorylated PGRMC1 Y139 & Y180 appeared concurrently with the gastrulation organiser. • The gastrulation organizer also appeared in the common ancestor of cnidarians and bilaterians. • PGRMC1 MIHIR has a predicted coiled-coil that would be disrupted by Y139 phosphorylation. • The C-terminus of each MAPR family was extended during the evolution from protists to animals. The membrane-associated progesterone receptor (MAPR) family consists of heme-binding proteins containing a cytochrome b5 (cytb5) domain characterized by the presence of a MAPR-specific interhelical insert region (MIHIR) between helices 3 and 4 of the canonical cytb5-domain fold. Animals possess three MAPR genes (PGRMC-like, Neuferricin and Neudesin). Here we show that all three animal MAPR genes were already present in the common ancestor of the opisthokonts (comprising animals and fungi as well as related single-celled taxa). All three MAPR genes acquired extensions C-terminal to the cytb5 domain, either before or with the evolution of animals. The archetypical MAPR protein, progesterone receptor membrane component 1 (PGRMC1), contains phosphorylated tyrosines Y139 and Y180. The combination of Y139/Y180 appeared in the common ancestor of cnidarians and bilaterians, along with an early embryological organizer and synapsed neurons, and is strongly conserved in all bilaterian animals. A predicted protein interaction motif in the PGRMC1 MIHIR is potentially regulated by Y139 phosphorylation. A multilayered model of animal MAPR function acquisition includes some pre-metazoan functions (e.g., heme binding and cytochrome P450 interactions) and some acquired animal-specific functions that involve regulation of strongly conserved protein interaction motifs acquired by animals (Metazoa). This study provides a conceptual framework for future studies, against which especially PGRMC1′s multiple functions can perhaps be stratified and functionally dissected.

Description: Current research highlights the importance of associated microbes in contributing to the functioning, health, and even adaptation of their animal, plant, and fungal hosts. As such, we are witnessing a shift in research that moves away from focusing on the eukaryotic host sensu stricto to research into the complex conglomerate of the host and its associated microorganisms (i.e., microbial eukaryotes, archaea, bacteria, and viruses), the so-called metaorganism, as the biological entity. While recent research supports and encourages the adoption of such an integrative view, it must be understood that microorganisms are not involved in all host processes and not all associated microorganisms are functionally important. As such, our intention here is to provide a critical review and evaluation of perspectives and limitations relevant to studying organisms in a metaorganism framework and the functional toolbox available to do so. We note that marker gene-guided approaches that primarily characterize microbial diversity are a first step in delineating associated microbes but are not sufficient to establish proof of their functional relevance. More sophisticated tools and experiments are necessary to reveal the specific functions of associated microbes. This can be accomplished through the study of metaorganisms in less complex environments, the targeted manipulation of microbial associates, or work at the mechanistic level with the toolbox available in model systems. We conclude that the metaorganism framework is a powerful new concept to help provide answers to longstanding biological questions such as the evolution and ecology of organismal complexity and the importance of organismal symbioses to ecosystem functioning. The intricacy of the metaorganism requires a holistic framework combining reductionist and integrative approaches to resolve metaorganism identities and to disclose the various roles that microorganisms play in the biology of their hosts.

Description: It is now recognised that the biology of almost any organism cannot be fully understood without recognising the existence and potential functional importance of associated microbes. Arguably, the emergence of this holistic viewpoint may never have occurred without the development of a crucial molecular technique, 16S rDNA amplicon sequencing, which allowed microbial communities to be easily profiled across a broad range of contexts. A diverse array of molecular techniques are now used to profile microbial communities, infer their evolutionary histories, visualise them in host tissues, and measure their molecular activity. In this review, we examine each of these categories of measurement and inference with a focus on the questions they make tractable, and the degree to which their capabilities and limitations shape our view of the holobiont.