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  • Articles  (4)
  • Biological pump  (2)
  • Haptophyte  (2)
  • 1
    Publication Date: 2017-01-04
    Description: Citation only. Published in Science 316: 567-570, doi: 10.1126/science.1137959
    Description: Funding was obtained primarily through the NSF, Ocean Sciences Programs in Chemical and Biological Oceanography, with additional support from the U.S. Department of Energy, Office of Science, Biological and Environmental Research Program, and other national programs, including the Australian Cooperative Research Centre program and Australian Antarctic Division.
    Keywords: Carbon flux ; Carbon sequestration ; Biological pump
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2022-05-26
    Description: © The Author(s), 2014. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Journal of Plankton Research 36 (2014): 943-955, doi:10.1093/plankt/fbu029.
    Description: The mechanisms by which phytoplankton cope with stressors in the marine environment are neither fully characterized nor understood. As viruses are the most abundant entities in the global ocean and represent a strong top-down regulator of phytoplankton abundance and diversity, we sought to characterize the cellular response of two marine haptophytes to virus infection in order to gain more knowledge about the nature and diversity of microalgal responses to this chronic biotic stressor. We infected laboratory cultures of the haptophytes Haptolina ericina and Phaeocystis pouchetii with CeV-01B or PpV-01B dsDNA viruses, respectively, and assessed the extent to which host cellular responses resemble programmed cell death (PCD) through the activation of diagnostic molecular and biochemical markers. Pronounced DNA fragmentation and activation of cysteine aspartate-specific proteases (caspases) were only detected in virus-infected cultures of these phytoplankton. Inhibition of host caspase activity by addition of the pan-caspase inhibitor z-VAD-fmk did not impair virus production in either host–virus system, differentiating it from the Emiliania huxleyi-Coccolithovirus model of haptophyte–virus interactions. Nonetheless, our findings point to a general conservation of PCD-like activation during virus infection in ecologically diverse haptophytes, with the subtle heterogeneity of cell death biochemical responses possibly exerting differential regulation on phytoplankton abundance and diversity.
    Description: Funding to J.L.R, R.-A.S. and A.L. was provided by the Norwegian Research Council for the “VIPMAP” (nr. 186142) and “HAPTODIV” (nr. 190307) projects, and by the European Research Council Advanced Grant ERC-AG-LS8 “Microbial Network Organisation” (MINOS, project number 250254). J.L.R. received a FRIBIO overseas research fellowship from the Norwegian Research Council. K.D.B. and B.V.M. were supported by funding from the United States National Science Foundation (OCE-1061883).
    Keywords: Caspase ; DNA fragmentation ; IETD ; Phycodnaviridae ; z-VAD-fmk ; Haptophyte
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 3
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Siegel, D. A., Cetinic, I., Graff, J. R., Lee, C. M., Nelson, N., Perry, M. J., Ramos, I. S., Steinberg, D. K., Buesseler, K., Hamme, R., Fassbender, A. J., Nicholson, D., Omand, M. M., Robert, M., Thompson, A., Amaral, V., Behrenfeld, M., Benitez-Nelson, C., Bisson, K., Boss, E., Boyd, P. W., Brzezinski, M., Buck, K., Burd, A., Burns, S., Caprara, S., Carlson, C., Cassar, N., Close, H. H., D’Asaro, E., Durkin, C., Erickson, Z., Estapa, M. L., Fields, E., Fox, J., Freeman, S., Gifford, S., Gong, W., Gray, D., Guidi, L., Haëntjens, N., Halsey, K., Huot, Y., Hansell, D., Jenkins, B., Karp-Boss, L., Kramer, S., Lam, P., Lee, J-M., Maas, A., Marchal, O., Marchetti, A., McDonnell, A., McNair, H., Menden-Deuer, S., Morison, F., Niebergall, A. K., Passow, U., Popp, B., Potvin, G., Resplandy, L., Roca-Martí, M., Roesler, C., Rynearson, T., Traylor, S., Santoro, A., Seraphin, K. D., Sosik, H. M., Stamieszkin, K., Stephens, B., Tang, W., Van Mooy, B., Xiong, Y., Zhang, X. An operational overview of the EXport Processes in the Ocean from RemoTe Sensing (EXPORTS) Northeast Pacific field deployment. Elementa: Science of the Anthropocene, 9(1), (2021): 1, https://doi.org/10.1525/elementa.2020.00107.
    Description: The goal of the EXport Processes in the Ocean from RemoTe Sensing (EXPORTS) field campaign is to develop a predictive understanding of the export, fate, and carbon cycle impacts of global ocean net primary production. To accomplish this goal, observations of export flux pathways, plankton community composition, food web processes, and optical, physical, and biogeochemical (BGC) properties are needed over a range of ecosystem states. Here we introduce the first EXPORTS field deployment to Ocean Station Papa in the Northeast Pacific Ocean during summer of 2018, providing context for other papers in this special collection. The experiment was conducted with two ships: a Process Ship, focused on ecological rates, BGC fluxes, temporal changes in food web, and BGC and optical properties, that followed an instrumented Lagrangian float; and a Survey Ship that sampled BGC and optical properties in spatial patterns around the Process Ship. An array of autonomous underwater assets provided measurements over a range of spatial and temporal scales, and partnering programs and remote sensing observations provided additional observational context. The oceanographic setting was typical of late-summer conditions at Ocean Station Papa: a shallow mixed layer, strong vertical and weak horizontal gradients in hydrographic properties, sluggish sub-inertial currents, elevated macronutrient concentrations and low phytoplankton abundances. Although nutrient concentrations were consistent with previous observations, mixed layer chlorophyll was lower than typically observed, resulting in a deeper euphotic zone. Analyses of surface layer temperature and salinity found three distinct surface water types, allowing for diagnosis of whether observed changes were spatial or temporal. The 2018 EXPORTS field deployment is among the most comprehensive biological pump studies ever conducted. A second deployment to the North Atlantic Ocean occurred in spring 2021, which will be followed by focused work on data synthesis and modeling using the entire EXPORTS data set.
    Description: DAS, NN, KB, EF, SK, AB, AM, UP: NASA 80NSSC17K0692. MJB, EB, JG, LG, KH, LKB, JF, NH: NASA 80NSSC17K0568. KB, CBN, LR, MRM: NASA 80NSSC17K0555. CC, DH, BS: NASA 80NSSC18K0437. HC: NSF 1830016. BP, KDS: NSF 1829425. ME, KB, CD, MO: NASA 80NSSC17K0662. AF: NSF 1756932. BJ, KB, MB, SB, SC: NSF 1756442. PH, OM, JML: NSF 1829614. CL, ED, DN, MO, MJP, AT, ZN, ST: NASA 80NSSC17K0663. AM, NC, SG, WT, AN, WG: NASA 80NSSC17K0552. SMD, TR, HM, FM: NASA 80NSSC17K0716. CR, HS: NASA 80NSSC17K0700. AS, PB: NASA 80NSSC18K1431. DS, AM, KS NASA 80NSSC17K0654. BVM: NSF 1756254. XZ, DG, LG, YH: NASA 80NSSC17K0656 and 80NSSC20K0350.
    Keywords: Biological pump ; NASA field campaign ; NPP fates ; Carbon cycle ; Organic carbon export ; Export pathways
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 4
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Lowenstein, D. P., Mayers, K., Fredricks, H. F., & Van Mooy, B. A. S. Targeted and untargeted lipidomic analysis of haptophyte cultures reveals novel and divergent nutrient-stress adaptations. Organic Geochemistry, 161, (2021): 104315, https://doi.org/10.1016/j.orggeochem.2021.104315.
    Description: Lipids comprise a significant, highly plastic proportion of the biomass in haptophytes, a ubiquitous, globally significant, and genetically diverse clade of photosynthetic microalgae. Recent studies have investigated the cellular lipidomes of disparate, individual species of haptophytes under nutrient-replete and nutrient-limited conditions, but have not investigated how lipidomes vary across the larger evolutionary clade or its ecological functional groups. We cultured eight species of haptophytes, including five strains of Emiliania huxleyi, for analysis via high performance liquid chromatography–high resolution accurate mass–mass spectrometry (HPLC–HRAM–MS), and performed untargeted computational and hierarchical cluster analyses on their lipidomes. We identified similarities and differences in lipidomes along both evolutionary and ecological lines, and identified potential biomarkers for haptophyte sub-clades, including 38 glycosphingolipids, seven betaine-like lipids, and three phosphatidyl-S,S-dimethylpropanethiol (PDPT) sulfo-phospholipids. We also provide the first evidence for the glycolipid, glucuronosyldiacylglycerol, in eukaryotic microalgae. We conducted a more targeted study of four haptophyte species under nitrogen- and phosphorus-limited conditions to investigate their lipidomic responses to nutrient stress. Under N- and P-limitation, the species exhibited disparate lipidomic responses. Uniquely, in response to N-limitation, E. huxleyi CCMP 374 heavily upregulated PDPT from 3.6 ± 0.9% to 10.4 ± 1.5% of quantified polar lipids. These previously uncharacterized lipidomes and responses to nutrient limitation reflect divergent evolutionary strategies and challenge popular phenotypic extrapolations between species.
    Description: This work was funded by a grant to B.A.S.V.M. from the Simons Foundation (#721229) and Gordon and Betty Moore Foundation (#5703). Support was also provided through grants to B.A.S.V.M. from the National Science Foundation (#17562524 and #2022597). Support for K.M. was provided by the U.K. Natural Environment Research Council in the form of a SPITFIRE Doctoral Training Partnership (# NE/L002531/1).
    Keywords: Betaine lipids ; Coccolithophore ; Haptophyte ; Polar lipids ; Nutrient limitation ; Phospholipids ; Phytoplankton ; Triacylglycerols
    Repository Name: Woods Hole Open Access Server
    Type: Article
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