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  • Amphipoda; Arctic; Bioavailability; BONGO; Bongo net; copepod; CTD/Rosette; CTD-RO; Depth, bottom/max; Depth, top/min; Event label; Fourier Transform Infrared spectroscopy (FTIR) in combination with automated polymer identification [SIMPLE software]; FRAM; Fram Strait; FRontiers in Arctic marine Monitoring; FTIR SIMPLE software; James Clark Ross; JR18007; JR18007_11; JR18007_130; JR18007_57; JR18007_97; LATITUDE; Length, maximal; Light frame on-sight keyspecies investigation; LOKI; LONGITUDE; marine litter; microplastic ingestion; Microplastics; MSN; MSN150; Multiple opening/closing net; Multiple opening/closing net, 150 µm meshsize; Number of individuals; PARCA; Particle camera; Plastic pollution; Polarstern; Polymer; PS114; PS114_4-1; PS114_4-2; PS114_4-5; PS114_4-6; PS114_46-7; PS114_46-8; PS114_4-7; PS114_4-8; PS114_4-9; PS114_9-3; PS114_9-4; PS114_9-5; Quality level; Sample ID; Size fraction; Species; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Type  (1)
  • Microorganism  (1)
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  • 1
    Publication Date: 2022-10-18
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in GigaScience 4 (2015): 27, doi:10.1186/s13742-015-0066-5.
    Description: Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites. This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits.
    Description: This work was supported by the Micro B3 project, which is funded from the European Union’s Seventh Framework Programme (FP7; Joint Call OCEAN.2011‐2: Marine microbial diversity – new insights into marine ecosystems functioning and its biotechnological potential) under the grant agreement no 287589.
    Keywords: Ocean sampling day ; OSD ; Biodiversity ; Genomics ; Health index ; Bacteria ; Microorganism ; Metagenomics ; Marine ; Micro B3 ; Standards
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2024-06-12
    Description: Zooplankton (amphipod and copepod) were collected using nets in the Fram Strait and the Arctic, in July 2018 and August 2019 for microplastic analysis. Water samples were also collected from the underway system and CTD alongside the August 2019 zooplankton samples (https://doi.pangaea.de/10.1594/PANGAEA.950239). All samples were initially digested using a homogenising solution and then filtered in preparation for Fourier Transform Infrared spectroscopy (FTIR) analysis in combination with an automated polymer identification approach (SIMPLE software) to identify polymer types, shape and size. Microplastics were also visualised using a microscope to further determine shape and size, particularly of fibres. Data collected on the microplastics found includes polymer type, shape, size, species ingestion and location.
    Keywords: Amphipoda; Arctic; Bioavailability; BONGO; Bongo net; copepod; CTD/Rosette; CTD-RO; Depth, bottom/max; Depth, top/min; Event label; Fourier Transform Infrared spectroscopy (FTIR) in combination with automated polymer identification [SIMPLE software]; FRAM; Fram Strait; FRontiers in Arctic marine Monitoring; FTIR SIMPLE software; James Clark Ross; JR18007; JR18007_11; JR18007_130; JR18007_57; JR18007_97; LATITUDE; Length, maximal; Light frame on-sight keyspecies investigation; LOKI; LONGITUDE; marine litter; microplastic ingestion; Microplastics; MSN; MSN150; Multiple opening/closing net; Multiple opening/closing net, 150 µm meshsize; Number of individuals; PARCA; Particle camera; Plastic pollution; Polarstern; Polymer; PS114; PS114_4-1; PS114_4-2; PS114_4-5; PS114_4-6; PS114_46-7; PS114_46-8; PS114_4-7; PS114_4-8; PS114_4-9; PS114_9-3; PS114_9-4; PS114_9-5; Quality level; Sample ID; Size fraction; Species; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Type
    Type: Dataset
    Format: text/tab-separated-values, 704 data points
    Location Call Number Limitation Availability
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