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  • ATLAS; A Trans-Atlantic assessment and deep-water ecosystem-based spatial management plan for Europe; Climate change; cold-water corals; Deep-sea; File format; File name; File size; fisheries; fishes; habitat suitability modelling; octocorals; scleractinians; species distribution models; Uniform resource locator/link to file; vulnerable marine ecosystems  (1)
  • Accession number, genetics; BC; BC24; Box corer; CCZ; Clarion Clipperton Fracture Zone; Database accession number; Date/Time of event; Date/Time of event 2; Deep-sea; DEPTH, sediment/rock; Depth comment; Device type; EBS; EBS1; EBS10; EBS11; EBS12; EBS13; EBS4; EBS5; EBS6; EBS7; EBS8; EBS9; Elevation of event; Elevation of event 2; epibenthic fauna; Epibenthic sledge; Event label; JPI Oceans - Ecological Aspects of Deep-Sea Mining; JPIO-MiningImpact; Latitude of event; Latitude of event 2; Longitude of event; Longitude of event 2; Method/Device of event; Morphotype; nodule; North Pacific Ocean; Number of individuals; Pacific; Polychaeta; Remote operated vehicle; ROV; ROV06; ROV08; ROV09; ROV13; ROV14; ROV15; Sample code/label; Sample ID; scale worms; SO239; SO239_117-1; SO239_131-1; SO239_133-1; SO239_135-1; SO239_138-1; SO239_158-1; SO239_171-1; SO239_189-1; SO239_192-1; SO239_197-1; SO239_200-1; SO239_20-1; SO239_210-1; SO239_212-1; SO239_50-1; SO239_59-1; SO239_81-1; SO239_82-1; SO239_99-1; Sonne_2; Status; Taxon/taxa; Trawling distance; Uniform resource locator/link to reference  (1)
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  • 1
    Publication Date: 2024-02-02
    Description: The dataset contains polychaete abundance data belonging to the family Polynoidae sampled using epibenthic sledge, ROV and box corer (BC; 0.25 m2) within the eastern Clarion Clipperton fracture Zone (northeast Pacific), an area currently being explored for polymetallic nodules. Macrobenthic samples were collected onboard RV Sonne during expedition SO239 in 2015. Four exploration contract areas (BGR, IOM, GSR and Ifremer) and one "Area of Particular Environmental Interest" (APEI#3) were sampled. Eight out of twelve epibenthic sledges samples were fully processed. All polynoids heads have been counted, sequenced and identified. Identifications were realized using morphology and DNA (COI, 16S and 18S genes) leading to morphospecies in most cases (species-level). DNA sequences are available in GenBank or BOLD databases with their respective codes in this dataset.
    Keywords: Accession number, genetics; BC; BC24; Box corer; CCZ; Clarion Clipperton Fracture Zone; Database accession number; Date/Time of event; Date/Time of event 2; Deep-sea; DEPTH, sediment/rock; Depth comment; Device type; EBS; EBS1; EBS10; EBS11; EBS12; EBS13; EBS4; EBS5; EBS6; EBS7; EBS8; EBS9; Elevation of event; Elevation of event 2; epibenthic fauna; Epibenthic sledge; Event label; JPI Oceans - Ecological Aspects of Deep-Sea Mining; JPIO-MiningImpact; Latitude of event; Latitude of event 2; Longitude of event; Longitude of event 2; Method/Device of event; Morphotype; nodule; North Pacific Ocean; Number of individuals; Pacific; Polychaeta; Remote operated vehicle; ROV; ROV06; ROV08; ROV09; ROV13; ROV14; ROV15; Sample code/label; Sample ID; scale worms; SO239; SO239_117-1; SO239_131-1; SO239_133-1; SO239_135-1; SO239_138-1; SO239_158-1; SO239_171-1; SO239_189-1; SO239_192-1; SO239_197-1; SO239_200-1; SO239_20-1; SO239_210-1; SO239_212-1; SO239_50-1; SO239_59-1; SO239_81-1; SO239_82-1; SO239_99-1; Sonne_2; Status; Taxon/taxa; Trawling distance; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 3505 data points
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2024-03-11
    Description: We used environmental niche modelling along with the best available species occurrence data and environmental parameters to model habitat suitability for key cold-water coral and commercially important deep-sea fish species under present-day (1951-2000) environmental conditions and to forecast changes under severe, high emissions future (2081-2100) climate projections (RCP8.5 scenario) for the North Atlantic Ocean (from 18°N to 76°N and 36°E to 98°W). The VME indicator taxa included Lophelia pertusa , Madrepora oculata, Desmophyllum dianthus, Acanela arbuscula, Acanthogorgia armata, and Paragorgia arborea. The six deep-sea fish species selected were: Coryphaenoides rupestris, Gadus morhua, blackbelly Helicolenus dactylopterus, Hippoglossoides platessoides, Reinhardtius hippoglossoides, and Sebastes mentella. We used an ensemble modelling approach employing three widely-used modelling methods: the Maxent maximum entropy model, Generalized Additive Models, and Random Forest. This dataset contains: 1) Predicted habitat suitability index under present-day (1951-2000) and future (2081-2100; RCP8.5) environmental conditions for twelve deep-sea species in the North Atlantic Ocean, using an ensemble modelling approach.  2) Climate-induced changes in the suitable habitat of twelve deep-sea species in the North Atlantic Ocean, as determined by binary maps built with an ensemble modelling approach and the 10-percentile training presence logistic (10th percentile) threshold. 3) Forecasted present-day suitable habitat loss (value=-1), gain (value=1), and acting as climate refugia (value=2) areas under future (2081-2100; RCP8.5) environmental conditions for twelve deep-sea species in the North Atlantic Ocean. Areas were identified from binary maps built with an ensemble modelling approach and two thresholds: 10-percentile training presence logistic threshold (10th percentile) and maximum sensitivity and specificity (MSS). Refugia areas are those areas predicted as suitable both under present-day and future conditions. All predictions were projected with the Albers equal-area conical projection centred in the middle of the study area. The grid cell resolution is of 3x3 km.
    Keywords: ATLAS; A Trans-Atlantic assessment and deep-water ecosystem-based spatial management plan for Europe; Climate change; cold-water corals; Deep-sea; File format; File name; File size; fisheries; fishes; habitat suitability modelling; octocorals; scleractinians; species distribution models; Uniform resource locator/link to file; vulnerable marine ecosystems
    Type: Dataset
    Format: text/tab-separated-values, 384 data points
    Location Call Number Limitation Availability
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