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  • ARCHEMHAB; Baffin Bay; Cloud cover; Date/Time of event; Davis Strait; Event label; Greenland Sea; Iceland Sea; Latitude of event; Light/Optics; LIOP; Longitude of event; Maria S. Merian; MSM21/3; MSM21/3_503-6; MSM21/3_504-4; MSM21/3_506-7; MSM21/3_507-5; MSM21/3_508-5; MSM21/3_512-5; MSM21/3_514-6; MSM21/3_515-7; MSM21/3_516-7; MSM21/3_517-9; MSM21/3_520-4; MSM21/3_521-7; MSM21/3_522-6; MSM21/3_525-4; MSM21/3_526-4; MSM21/3_527-7; MSM21/3_528-6; MSM21/3_529-7; MSM21/3_530-6; MSM21/3_531-6; MSM21/3_532-7; MSM21/3_533-6; MSM21/3_534-8; MSM21/3_535-6; MSM21/3_536-7; MSM21/3_537-5; MSM21/3_538-6; Visual observation  (1)
  • Alexandrium spp.; Alexandrium tamarense; Alexandrium tamutum; CTD/Rosette; CTD-RO; Date/Time of event; DEPTH, water; Event label; HE209; HE209_S10; HE209_S11; HE209_S12; HE209_S13; HE209_S15; HE209_S2; HE209_S4; HE209_S5; HE209_S6; HE209_S7; Heincke; Latitude of event; Longitude of event; Modified liquid chromatography with fluorescence detection (Yu et al 1998); North Sea; Paralytic shellfish poisoning toxins; Quantitative phytoplankton method (Utermöhl, 1958); Real-time quantitative polymerase chain reaction (qPCR); S10; S11; S12; S13; S15; S2; S4; S5; S6; S7; Sample code/label  (1)
  • Biotoxins  (1)
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  • 1
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    Unknown
    PANGAEA
    In:  Supplement to: Töbe, Kerstin; Alpermann, Tilman J; Tillmann, Urban; Krock, Bernd; Cembella, Allan; John, Uwe (2013): Molecular discrimination of toxic and non-toxic Alexandrium species (Dinophyta) in natural phytoplankton assemblages from the Scottish coast of the North Sea. European Journal of Phycology, 48(1), 12-26, https://doi.org/10.1080/09670262.2012.752870
    Publication Date: 2024-01-12
    Description: Molecular methods provide promising tools for routine detection and quantification of toxic microalgae in plankton samples. To this end, novel TaqMan minor groove binding probes and primers targeting the small (SSU) or large (LSU) ribosomal subunit (rRNA) were developed for two species of the marine dinoflagellate genus Alexandrium (A. minutum, A. tamutum) and for three groups/ribotypes of the A. tamarense species complex: Group I/North American (NA), Group II/Mediterranean (ME) and Group III/Western European (WE). Primers and probes for real-time quantitative PCR (qPCR) were species-specific and highly efficient when tested in qPCR assays for cross-validation with pure DNA from cultured Alexandrium strains. Suitability of the qPCR assays as molecular tools for the detection and estimation of relative cell abundances of Alexandrium species and groups was evaluated from samples of natural plankton assemblages along the Scottish east coast. The results were compared with inverted microscope cell counts (Utermöhl technique) of Alexandrium spp. and associated paralytic shellfish poisoning (PSP) toxin concentrations. The qPCR assays indicated that A. tamarense (Group I) and A. tamutum were the most abundant Alexandrium taxa and both were highly positively correlated with PSP toxin content of plankton samples. Cells of A. tamarense (Group III) were present at nearly all stations but in low abundance. Alexandrium minutum and A. tamarense (Group II) cells were not detected in any of the samples, thereby arguing for their absence from the specific North Sea region, at least at the time of the survey. The sympatric occurrence of A. tamarense Group I and Group III gives further support to the hypothesis that the groups/ribotypes of the A. tamarense species complex are cryptic species rather than variants belonging to the same species.
    Keywords: Alexandrium spp.; Alexandrium tamarense; Alexandrium tamutum; CTD/Rosette; CTD-RO; Date/Time of event; DEPTH, water; Event label; HE209; HE209_S10; HE209_S11; HE209_S12; HE209_S13; HE209_S15; HE209_S2; HE209_S4; HE209_S5; HE209_S6; HE209_S7; Heincke; Latitude of event; Longitude of event; Modified liquid chromatography with fluorescence detection (Yu et al 1998); North Sea; Paralytic shellfish poisoning toxins; Quantitative phytoplankton method (Utermöhl, 1958); Real-time quantitative polymerase chain reaction (qPCR); S10; S11; S12; S13; S15; S2; S4; S5; S6; S7; Sample code/label
    Type: Dataset
    Format: text/tab-separated-values, 404 data points
    Location Call Number Limitation Availability
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  • 2
    facet.materialart.
    Unknown
    PANGAEA
    In:  Institute for Chemistry and Biology of the Marine Environment, Carl-von-Ossietzky University of Oldenburg, Germany
    Publication Date: 2024-02-02
    Keywords: ARCHEMHAB; Baffin Bay; Cloud cover; Date/Time of event; Davis Strait; Event label; Greenland Sea; Iceland Sea; Latitude of event; Light/Optics; LIOP; Longitude of event; Maria S. Merian; MSM21/3; MSM21/3_503-6; MSM21/3_504-4; MSM21/3_506-7; MSM21/3_507-5; MSM21/3_508-5; MSM21/3_512-5; MSM21/3_514-6; MSM21/3_515-7; MSM21/3_516-7; MSM21/3_517-9; MSM21/3_520-4; MSM21/3_521-7; MSM21/3_522-6; MSM21/3_525-4; MSM21/3_526-4; MSM21/3_527-7; MSM21/3_528-6; MSM21/3_529-7; MSM21/3_530-6; MSM21/3_531-6; MSM21/3_532-7; MSM21/3_533-6; MSM21/3_534-8; MSM21/3_535-6; MSM21/3_536-7; MSM21/3_537-5; MSM21/3_538-6; Visual observation
    Type: Dataset
    Format: text/tab-separated-values, 27 data points
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2022-05-26
    Description: Author Posting. © The Author(s), 2011. This is the author's version of the work. It is posted here by permission of Elsevier for personal use, not for redistribution. The definitive version was published in Harmful Algae 14 (2012): 10-35, doi:10.1016/j.hal.2011.10.012.
    Description: The dinoflagellate genus Alexandrium is one of the major harmful algal bloom (HAB) genera with respect to the diversity, magnitude and consequences of blooms. The ability of Alexandrium to colonize multiple habitats and to persist over large regions through time is testimony to the adaptability and resilience of this group of species. Three different families of toxins, as well as an as yet incompletely characterized suite of allelochemicals are produced among Alexandrium species. Nutritional strategies are equally diverse, including the ability to utilize a range of inorganic and organic nutrient sources, and feeding by ingestion of other organisms. Many Alexandrium species have complex life histories that include sexuality and often, but not always, cyst formation, which is characteristic of a meroplanktonic life strategy and offers considerable ecological advantages. Due to the public health and ecosystem impacts of Alexandrium blooms, the genus has been extensively studied, and there exists a broad knowledge base that ranges from taxonomy and phylogeny through genomics and toxin biosynthesis to bloom dynamics and modeling. Here we present a review of the genus Alexandrium, focusing on the major toxic and otherwise harmful species.
    Description: Support to DMA was provided by the National Institute of Environmental Health Sciences (1-P50-ES012742) and the National Science Foundation through the Woods Hole Center for Oceans and Human Health (OCE-0430724), and by NOAA Grants NA09NOS4780193, NA06OAR4170021 and NA06NOS4780245. Research funding to ADC and previously to TJA was furnished under the PACES Programme (Coast WP2) from the Helmholtz Society initiative Earth and Environment. Support to TJA was obtained by the research funding program LOEWE (Landes-Offensive zur Entwicklung Wissenschaftlich-ökonomischer Exzellenz) of Hesse’s Ministry of Higher Education, Research, and the Arts. Support to EM and YC was provided by grants from the French National Programme “Ecosphère Continentale et Côtière-EC2CO and from the “Fondation pour la Recherche sur la Biodiversité-INVALEX project (AAP-IN-2009- 036).
    Keywords: Alexandrium ; Harmful algal blooms ; HAB ; Biotoxins ; Public health ; Global dispersion
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
    Format: application/pdf
    Location Call Number Limitation Availability
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