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  • 1; 2; Center for Marine Environmental Sciences; Cumulative power; Elevation of event; Event label; Fourier power; GeoB16602-2; Identification; INVERS; Latitude of event; Longitude of event; M69/1; M69/1_324-2; M69/1_USW8; MARUM; Meteor (1986); MSN; Multiple opening/closing net; PLA; Plankton net; Puerto_Rico_2012-1; Puerto_Rico_2012-2; PUMP; Ratio; SO221; Sonne; Water pump  (1)
  • AWI; Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas; SPP1158  (1)
  • Area/locality; Bioturbation; Burrows; Depth, bottom/max; Description; Grain size description; Mounds; Number of stations; Occurrence; Sediment type; Station label; Surface description; Tubes  (1)
  • Beach  (1)
Document type
Keywords
Publisher
Years
  • 1
    Publication Date: 2023-03-03
    Keywords: 1; 2; Center for Marine Environmental Sciences; Cumulative power; Elevation of event; Event label; Fourier power; GeoB16602-2; Identification; INVERS; Latitude of event; Longitude of event; M69/1; M69/1_324-2; M69/1_USW8; MARUM; Meteor (1986); MSN; Multiple opening/closing net; PLA; Plankton net; Puerto_Rico_2012-1; Puerto_Rico_2012-2; PUMP; Ratio; SO221; Sonne; Water pump
    Type: Dataset
    Format: text/tab-separated-values, 1829 data points
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2023-05-12
    Keywords: Area/locality; Bioturbation; Burrows; Depth, bottom/max; Description; Grain size description; Mounds; Number of stations; Occurrence; Sediment type; Station label; Surface description; Tubes
    Type: Dataset
    Format: text/tab-separated-values, 270 data points
    Location Call Number Limitation Availability
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  • 3
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    PANGAEA
    In:  Supplement to: Brandt, Angelika; Gooday, Andrew J; Brandão, Simone N; Brix, Saskia; Brökeland, Wiebke; Cedhagen, Tomas; Choudhury, Madhumita; Cornelius, Nils; Danis, Bruno; De Mesel, Ilse; Diaz, Robert; Gillan, David C; Ebbe, Brigitte; Howe, John; Janussen, Dorte; Kaiser, Stefanie; Linse, Katrin; Malyutina, Marina; Pawlowski, Jan; Raupach, Michael R; Vanreusel, Ann (2007): First insights into the biodiversity and biogeography of the Southern Ocean deep sea. Nature, 447(7142), 307-311, https://doi.org/10.1038/nature05827
    Publication Date: 2023-10-28
    Description: Shallow marine benthic communities around Antarctica show high levels of endemism, gigantism, slow growth, longevity and late maturity, as well as adaptive radiations that have generated considerable biodiversity in some taxa1. The deeper parts of the Southern Ocean exhibit some unique environmental features, including a very deep continental shelf2 and a weakly stratified water column, and are the source for much of the deep water in the world ocean. These features suggest that deep-sea faunas around the Antarctic may be related both to adjacent shelf communities and to those in other oceans. Unlike shallow-water Antarctic benthic communities, however, little is known about life in this vast deep-sea region2, 3. Here, we report new data from recent sampling expeditions in the deep Weddell Sea and adjacent areas (748-6,348 m water depth) that reveal high levels of new biodiversity; for example, 674 isopods species, of which 585 were new to science. Bathymetric and biogeographic trends varied between taxa. In groups such as the isopods and polychaetes, slope assemblages included species that have invaded from the shelf. In other taxa, the shelf and slope assemblages were more distinct. Abyssal faunas tended to have stronger links to other oceans, particularly the Atlantic, but mainly in taxa with good dispersal capabilities, such as the Foraminifera. The isopods, ostracods and nematodes, which are poor dispersers, include many species currently known only from the Southern Ocean. Our findings challenge suggestions that deep-sea diversity is depressed in the Southern Ocean and provide a basis for exploring the evolutionary significance of the varied biogeographic patterns observed in this remote environment.
    Keywords: AWI; Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas; SPP1158
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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  • 4
    Publication Date: 2024-05-30
    Description: Foraminifera are a species-rich phylum of rhizarian protists that are highly abundant in most marine environments. Molecular methods such as metabarcoding have revealed a high, yet undescribed diversity of Foraminifera. However, so far only one molecular marker, the 18S ribosomal RNA, was available for metabarcoding studies on Foraminifera. Primers that allow amplification of foraminiferal mitochondrial cytochrome oxidase I (COI) and identification of Foraminifera species were recently published. Here we test the performance of these primers for the amplification of whole foraminiferal communities, and compare their performance to that of the highly degenerate LerayXT primers, which amplify the same COI region in a wide range of eukaryotes. We applied metabarcoding to 48 samples taken along three transects spanning a North Sea beach in the Netherlands from dunes to the low tide level, and analysed both sediment samples and meiofauna samples, which contained taxa between 42 mm and 1 mm in body size obtained by decantation from sand samples. We used single-cell metabarcoding (Girard et al., 2022) to generate a COI reference library containing 32 species of Foraminifera, and used this to taxonomically annotate our community metabarcoding data. Our analyses show that the highly degenerate LerayXT primers do not amplify Foraminifera, while the Foraminifera primers are highly Foraminifera- specific, with about 90% of reads assigned to Foraminifera and amplifying taxa from all major groups, i.e., monothalamids, Globothalamea, and Tubothalamea. We identified 176 Foraminifera ASVs and found a change in Foraminifera community composition along the beach transects from high tide to low tide level, and a dominance of single-chambered monothalamid Foraminifera. Our results highlight that COI metabarcoding can be a powerful tool for assessing Foraminiferal communities.
    Keywords: Foraminifera ; Metabarcoding ; Beach ; Community composition ; Intertidal ; Molecular ; biodiversity
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
    Location Call Number Limitation Availability
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