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  • PANGAEA  (30)
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  • 1
    Publication Date: 2023-03-14
    Keywords: Change; Darlington; DATE/TIME; EXP; Experiment; Oxygen saturation; pH; pH change; Replicate; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 168 data points
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2023-03-14
    Keywords: Darlington; DATE/TIME; DEPTH, water; Event label; EXP; Experiment; Fortescue_Bay; Habitat; LATITUDE; LONGITUDE; Oxygen; pH; ph electrode; pHTempion; Replicate; Salinity; SeaPHOX; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 9497 data points
    Location Call Number Limitation Availability
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  • 3
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    PANGAEA
    In:  Supplement to: Britton, Damon; Cornwall, Christopher Edward; Revill, Andrew T; Hurd, Catriona L; Johnson, Craig R (2016): Ocean acidification reverses the positive effects of seawater pH fluctuations on growth and photosynthesis of the habitat-forming kelp, Ecklonia radiata. Scientific Reports, 6, 26036, https://doi.org/10.1038/srep26036
    Publication Date: 2023-01-13
    Description: Ocean acidification (OA) is the reduction in seawater pH due to the absorption of human-released CO2 by the world's oceans. The average surface oceanic pH is predicted to decline by 0.4 units by 2100. However, kelp metabolically modifies seawater pH via photosynthesis and respiration in some temperate coastal systems, resulting in daily pH fluctuations of up to ±0.45 units. It is unknown how these fluctuations in pH influence the growth and physiology of the kelp, or how this might change with OA. In laboratory experiments that mimicked the most extreme pH fluctuations measured within beds of the canopy-forming kelp Ecklonia radiata in Tasmania, the growth and photosynthetic rates of juvenile E. radiata were greater under fluctuating pH (8.4 in the day, 7.8 at night) than in static pH treatments (8.4, 8.1, 7.8). However, pH fluctuations had no effect on growth rates and a negative effect on photosynthesis when the mean pH of each treatment was reduced by 0.3 units. Currently, pH fluctuations have a positive effect on E. radiata but this effect could be reversed in the future under OA, which is likely to impact the future ecological dynamics and productivity of habitats dominated by E. radiata.
    Type: Dataset
    Format: application/zip, 3 datasets
    Location Call Number Limitation Availability
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  • 4
    Publication Date: 2023-01-30
    Description: This dataset comprises data obtained during a 6 week-long exposure experiment of mussels of the family Mytilidae to two types of microplastics, namely polymethyl methacrylate (PMMA) and polyvinylchloride (PVC) particles and two types of natural inorganic microparticles, namely diatoms and red clay. This data was obtained from May to September 2019 in five different bioregions, which are Tasmania, Chile, Japan, Cabo Verde and Israel. We recorded body condition index, byssus thread production in 24 hours, clearance rate of the food algae and respiration rate at the end of six weeks of exposure to the four different microparticles (with an exception of the groups exposed to PVC and red clay in Tasmania, which lasted 5 weeks). Mussels were exposed to three concentrations of each particle type, which were 1.5, 15 and 150 mg/l and one group to no particles at all as control.
    Keywords: Area/locality; Byssus production per individual; Clearance rate; Dry mass; GAME; Global Approach by Modular Experiments; Microplastics; Mytilidae; natural microparticles; Particle concentration; Respiration rate, oxygen; seston; Shell, mass; Shell length; Species; Status; Survival; Temperature, water, annual mean; Treatment; Wet mass
    Type: Dataset
    Format: text/tab-separated-values, 9377 data points
    Location Call Number Limitation Availability
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  • 5
    Publication Date: 2023-07-07
    Description: Seaweeds are able to modify the chemical environment at their surface, in a micro‐zone called the diffusive boundary layer (DBL), via their metabolic processes controlled by light intensity. Depending on the thickness of the DBL, sessile invertebrates such as calcifying bryozoans or tube‐forming polychaetes living on the surface of the blades can be affected by the chemical variations occurring in this microlayer. Especially in the context of ocean acidification (OA), these microhabitats might be considered as a refuge from lower pH, because during the day photosynthesis temporarily raises the pH to values higher than in the mainstream seawater. We assessed the thickness and the characteristics of the DBL at two pH levels (today's average surface ocean pH 8.1 and a reduced pH predicted for the end of the century, pH 7.7) and seawater flows (slow, 0.5 and fast, 〉8 cm/s) on Ecklonia radiata (kelp) blades. Oxygen and pH profiles from the blade surface to the mainstream seawater were measured with O2 and pH microsensors for both bare blades and blades colonized by the bryozoan Membranipora membranacea. The DBL was thicker in slow flow compared with fast flow and the presence of bryozoans increased the DBL thickness and shaped the DBL gradient in dark conditions. Net production was increased in the low pH condition, increasing the amount of oxygen in the DBL in both bare and epiphytized blades. This increase drove the daily pH fluctuations at the blade surface, shifting them towards higher values compared with today's pH. The presence of bryozoans led to lower oxygen concentrations in the DBL and more complex pH fluctuations at the blade surface, particularly at pH 7.7. Overall, this study, based on microprofiles, shows that, in slow flow, DBL microenvironments at the surface of the kelps may constitute a refuge from OA with pH values higher than those of the mainstream seawater. For calcifying organisms, it could also represent training ground for harsh conditions, with broad daily pH and oxygen fluctuations. These chemical microenvironments, biologically shaped by the macrophytes, are of great interest for the resilience of coastal ecosystems in the context of global change.
    Keywords: Benthos; Chromista; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); Laboratory experiment; Macroalgae; OA-ICC; Ocean Acidification International Coordination Centre; Ochrophyta; Other; Other metabolic rates; Primary production/Photosynthesis; Single species; South Pacific; Temperate
    Type: Dataset
    Format: application/zip, 7 datasets
    Location Call Number Limitation Availability
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  • 6
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    PANGAEA
    In:  Supplement to: Cornwall, Christopher Edward; Hepburn, Christopher D; Pritchard, Daniel; Currie, Kim I; McGraw, Christina M; Hunter, Keith A; Hurd, Catriona L (2012): Carbon-use strategies in macroalgae: Differential responses to lowered pH and implications for ocean acidification. Journal of Phycology, 48(1), 137-144, https://doi.org/10.1111/j.1529-8817.2011.01085.x
    Publication Date: 2024-03-15
    Description: Ocean acidification (OA) is a reduction in oceanic pH due to increased absorption of anthropogenically produced CO2. This change alters the seawater concentrations of inorganic carbon species that are utilized by macroalgae for photosynthesis and calcification: CO2 and HCO3 increase; CO32 decreases. Two common methods of experimentally reducing seawater pH differentially alter other aspects of carbonate chemistry: the addition of CO2 gas mimics changes predicted due to OA, while the addition of HCl results in a comparatively lower [HCO3]. We measured the short-term photosynthetic responses of five macroalgal species with various carbon-use strategies in one of three seawater pH treatments: pH 7.5 lowered by bubbling CO2 gas, pH 7.5 lowered by HCl, and ambient pH 7.9. There was no difference in photosynthetic rates between the CO2, HCl, or pH 7.9 treatments for any of the species examined. However, the ability of macroalgae to raise the pH of the surrounding seawater through carbon uptake was greatest in the pH 7.5 treatments. Modeling of pH change due to carbon assimilation indicated that macroalgal species that could utilize HCO3 increased their use of CO2 in the pH 7.5 treatments compared to pH 7.9 treatments. Species only capable of using CO2 did so exclusively in all treatments. Although CO2 is not likely to be limiting for photosynthesis for the macroalgal species examined, the diffusive uptake of CO2 is less energetically expensive than active HCO3 uptake, and so HCO3-using macroalgae may benefit in future seawater with elevated CO2.
    Keywords: Alkalinity, total; Alkalinity, total, standard error; Aragonite saturation state; Benthos; Bicarbonate; Bicarbonate ion; Bicarbonate ion, standard error; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated, see reference(s); Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Calculated using SWCO2 (Hunter, 2007); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard error; Carbonate ion; Carbonate ion, standard error; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard error; Carbon dioxide, total; Chlorophyta; Chromista; Coast and continental shelf; Corallina officinalis; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gross photosynthesis rate, oxygen; Gross photosynthesis rate, oxygen, standard error; Laboratory experiment; Macroalgae; Metabolically induced rate of pH change; Metabolically induced rate of pH change, standard error; OA-ICC; Ocean Acidification International Coordination Centre; Ochrophyta; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard error; pH meter (Orion); Plantae; Primary production/Photosynthesis; Rhodophyllis gunnii; Rhodophyta; Salinity; Schizoseris sp.; Single species; South Pacific; Species; Temperate; Temperature, water; Titration; Ulva sp.; Undaria pinnatifida
    Type: Dataset
    Format: text/tab-separated-values, 480 data points
    Location Call Number Limitation Availability
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  • 7
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    PANGAEA
    In:  Supplement to: Cornwall, Christopher Edward; Hepburn, Christopher D; McGraw, Christina M; Currie, Kim I; Pilditch, Conrad A; Hunter, Keith A; Boyd, Philip W; Hurd, Catriona L (2013): Diurnal fluctuations in seawater pH influence the response of a calcifying macroalga to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 280(1772), 20132201-20132201, https://doi.org/10.1098/rspb.2013.2201
    Publication Date: 2024-03-15
    Description: Coastal ecosystems that are characterized by kelp forests encounter daily pH fluctuations, driven by photosynthesis and respiration, which are larger than pH changes owing to ocean acidification (OA) projected for surface ocean waters by 2100. We investigated whether mimicry of biologically mediated diurnal shifts in pH-based for the first time on pH time-series measurements within a kelp forest-would offset or amplify the negative effects of OA on calcifiers. In a 40-day laboratory experiment, the calcifying coralline macroalga, Arthrocardia corymbosa, was exposed to two mean pH treatments (8.05 or 7.65). For each mean, two experimental pH manipulations were applied. In one treatment, pH was held constant. In the second treatment, pH was manipulated around the mean (as a step-function), 0.4 pH units higher during daylight and 0.4 units lower during darkness to approximate diurnal fluctuations in a kelp forest. In all cases, growth rates were lower at a reduced mean pH, and fluctuations in pH acted additively to further reduce growth. Photosynthesis, recruitment and elemental composition did not change with pH, but ?(13)C increased at lower mean pH. Including environmental heterogeneity in experimental design will assist with a more accurate assessment of the responses of calcifiers to OA.
    Keywords: Alkalinity, total; Alkalinity, total, standard error; Aragonite saturation state; Arthrocardia corymbosa; Benthos; Bicarbonate ion; Bicarbonate ion, standard error; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calcium; Calcium, standard error; Calculated; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard error; Carbon/Nitrogen ratio; Carbon/Nitrogen ratio, standard error; Carbonate ion; Carbonate ion, standard error; Carbonate system computation flag; Carbon dioxide; Chlorophyll a; Chlorophyll a, standard error; Coast and continental shelf; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gross photosynthesis rate, oxygen; Gross photosynthesis rate, oxygen, standard error; Growth/Morphology; Growth rate; Growth rate, standard error; Incubation duration; Karitane; Laboratory experiment; Macroalgae; Magnesium; Magnesium, standard error; Magnesium carbonate, magnesite; Magnesium carbonate, magnesite, standard error; Maximum photochemical quantum yield of photosystem II; Maximum photochemical quantum yield of photosystem II, standard error; OA-ICC; Ocean Acidification International Coordination Centre; Other; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error; pH; pH, standard error; Phycocyanin; Phycocyanin, standard error; Phycoerythrin; Phycoerythrin, standard error; Plantae; Potentiometric; Potentiometric titration; Primary production/Photosynthesis; Recruitment; Recruitment, standard error; Reproduction; Rhodophyta; Salinity; Single species; South Pacific; Species; Temperate; Temperature, water; Treatment; δ13C, inorganic carbon; δ13C, inorganic carbon, standard error; δ13C, organic carbon; δ13C, organic carbon, standard error; δ15N, organic matter; δ15N, organic matter, standard error
    Type: Dataset
    Format: text/tab-separated-values, 1763 data points
    Location Call Number Limitation Availability
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  • 8
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    PANGAEA
    In:  Supplement to: James, Rebecca K; Hepburn, Christopher D; Cornwall, Christopher Edward; McGraw, Christina M; Hurd, Catriona L (2014): Growth response of an early successional assemblage of coralline algae and benthic diatoms to ocean acidification. Marine Biology, 161(7), 1687-1696, https://doi.org/10.1007/s00227-014-2453-3
    Publication Date: 2024-03-15
    Description: The sustained absorption of anthropogenically released atmospheric CO2 by the oceans is modifying seawater carbonate chemistry, a process termed ocean acidification (OA). By the year 2100, the worst case scenario is a decline in the average oceanic surface seawater pH by 0.3 units to 7.75. The changing seawater carbonate chemistry is predicted to negatively affect many marine species, particularly calcifying organisms such as coralline algae, while species such as diatoms and fleshy seaweed are predicted to be little affected or may even benefit from OA. It has been hypothesized in previous work that the direct negative effects imposed on coralline algae, and the direct positive effects on fleshy seaweeds and diatoms under a future high CO2 ocean could result in a reduced ability of corallines to compete with diatoms and fleshy seaweed for space in the future. In a 6-week laboratory experiment, we examined the effect of pH 7.60 (pH predicted to occur due to ocean acidification just beyond the year 2100) compared to pH 8.05 (present day) on the lateral growth rates of an early successional, cold-temperate species assemblage dominated by crustose coralline algae and benthic diatoms. Crustose coralline algae and benthic diatoms maintained positive growth rates in both pH treatments. The growth rates of coralline algae were three times lower at pH 7.60, and a non-significant decline in diatom growth meant that proportions of the two functional groups remained similar over the course of the experiment. Our results do not support our hypothesis that benthic diatoms will outcompete crustose coralline algae under future pH conditions. However, while crustose coralline algae were able to maintain their presence in this benthic rocky reef species assemblage, the reduced growth rates suggest that they will be less capable of recolonizing after disturbance events, which could result in reduced coralline cover under OA conditions.
    Keywords: Alkalinity, total; Alkalinity, total, standard error; Aragonite saturation state; Area, standard error; Area in square milimeter; Benthos; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Category; Coast and continental shelf; Community composition and diversity; Entire community; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Huriawa_Peninsula; Laboratory experiment; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Percentage; Percentage, standard error; pH; pH, standard deviation; Potentiometric; Potentiometric titration; Rocky-shore community; Salinity; South Pacific; Species; Temperate; Temperature, water; Temperature, water, standard deviation; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 620 data points
    Location Call Number Limitation Availability
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  • 9
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    PANGAEA
    In:  Supplement to: Fernández, Pamela A; Hurd, Catriona L; Roleda, Michael Y (2014): Bicarbonate uptake via an anion exchange protein is the main mechanism of inorganic carbon acquisition by the giant kelp Macrocystis pyrifera (Laminariales, Phaeophyceae) under variable pH. Journal of Phycology, 50(6), 998-1008, https://doi.org/10.1111/jpy.12247
    Publication Date: 2024-03-15
    Description: Macrocystis pyrifera is a widely distributed, highly productive, seaweed. It is known to use bicarbonate (HCO3-) from seawater in photosynthesis and the main mechanism of utilization is attributed to the external catalyzed dehydration of HCO3- by the surface-bound enzyme carbonic anhydrase (CAext). Here, we examined other putative HCO3- uptake mechanisms in M. pyrifera under pHT 9.00 (HCO3-: CO2 = 940:1) and pHT 7.65 (HCO3-: CO2 = 51:1). Rates of photosynthesis, and internal CA (CAint) and CAext activity were measured following the application of AZ which inhibits CAext, and DIDS which inhibits a different HCO3- uptake system, via an anion exchange (AE) protein. We found that the main mechanism of HCO3- uptake by M. pyrifera is via an AE protein, regardless of the HCO3-: CO2 ratio, with CAext making little contribution. Inhibiting the AE protein led to a 55%-65% decrease in photosynthetic rates. Inhibiting both the AE protein and CAext at pHT 9.00 led to 80%-100% inhibition of photosynthesis, whereas at pHT 7.65, passive CO2 diffusion supported 33% of photosynthesis. CAint was active at pHT 7.65 and 9.00, and activity was always higher than CAext, because of its role in dehydrating HCO3- to supply CO2 to RuBisCO. Interestingly, the main mechanism of HCO3- uptake in M. pyrifera was different than that in other Laminariales studied (CAext-catalyzed reaction) and we suggest that species-specific knowledge of carbon uptake mechanisms is required in order to elucidate how seaweeds might respond to future changes in HCO3-:CO2 due to ocean acidification.
    Keywords: Alkalinity, total; Aragonite saturation state; Aromoana; Benthos; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Calculated using SWCO2 (Hunter, 2007); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbonic anhydrase activity; Carbonic anhydrase activity, standard error; Chromista; Coast and continental shelf; Coulometric titration; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Inhibition of net photosynthesis; Inhibition of net photosynthesis, standard error; Laboratory experiment; Macroalgae; Macrocystis pyrifera; Net photosynthesis rate, oxygen; Net photosynthesis rate, oxygen, standard error; OA-ICC; Ocean Acidification International Coordination Centre; Ochrophyta; Other metabolic rates; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Potentiometric titration; Primary production/Photosynthesis; Salinity; Single species; South Pacific; Species; Spectrophotometric; Temperate; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 465 data points
    Location Call Number Limitation Availability
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  • 10
    Publication Date: 2024-03-15
    Keywords: Alkalinity, total; Aragonite saturation state; Benthos; Bicarbonate ion; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard error; Carbon/Nitrogen ratio; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chromista; Coast and continental shelf; Deoxyribonucleic acid; Ecklonia radiata; EXP; Experiment; Fortescue_Bay; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Laboratory experiment; Macroalgae; Maximal electron transport rate, relative; Maximum photochemical quantum yield of photosystem II; Net photosynthesis rate, oxygen; OA-ICC; Ocean Acidification International Coordination Centre; Ochrophyta; Other; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard error; Primary production/Photosynthesis; Registration number of species; Replicate; Ribonucleic acid; RNA/DNA ratio; Salinity; Single species; South Pacific; Species; Temperate; Temperature, water; Treatment; Type; Uniform resource locator/link to reference; δ13C
    Type: Dataset
    Format: text/tab-separated-values, 1400 data points
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