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  • PANGAEA  (14)
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  • 1
    Publication Date: 2023-09-28
    Description: Water parameters in the 2 years before spawning of F0 (08.02.2016-06.03.2018) and during larval and juvenile phase of F1: Larval period until 17.05.2018 (48 dph, 900 dd) and 01.06.2018 (63 dph, ~900 dd) for warm and cold life condition respectively, for the juveniles until 28.09.2018 (180 dph, ~4000 dd) and 12.02.2019 (319 dph, ~5100 dd) for warm and cold conditioned fish respectively. Means ± s.e. over all replicate tanks per condition. Temperature (Temp.), pH (free scale), salinity, oxygen and total alkalinity (TA) were measured weekly in F1 and monthly in F0; sea water (SW) measurements were conducted in 2017 and 2018. Water parameters during larval and early juvenile phase of F0: Larval period until (45 dph, 900 dd, 06.12.2013), early juveniles until 1.5 years. Means ± s.e.m. over all measurements per condition (triplicate tanks in larvae, single tanks in juveniles). Temperature (Temp.) and pH (NBS scale) were measured daily. pH (total scale), salinity, phosphate, silicate and total alkalinity (TA) were measured once at the beginning and once at the end of the larval phase and 9 times during juvenile phase; PCO2 was calculated with CO2sys; A–Ambient PCO2, D1000 –ambient + 1000 µatm CO2, L – Larvae, J – Juveniles.
    Keywords: Alkalinity, total; Alkalinity, total, standard error; Calculated; Calculated by CO2sys_xls_program (Lewis and Wallace, 2006); Carbon dioxide (water) partial pressure; DATE/TIME; Generation; juvenile growth; Laboratory experiment; larval growth; Life stage; Measured spectrophotometrically (Dickson et al., 2007) with purified m-cresol purple; metabolic rates; Multiprobe, WTW 340i; Ocean acidification; ocean warming; Oxygen, dissolved; Oxygen, dissolved, standard error; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error; pH; pH, standard error; pH meter (WTW 3110) with electrode (WTW Sentix 41); Phosphate; Phosphate, standard error; Salinity; Salinity, standard error; Salinometer (WTW LF325, Xylem Analytics Germany, Weilheim, Germany); SEAL AA3 segmented flow autoanalyzer; Silicate; Silicate, standard error; teleost; Temperature, water; Temperature, water, standard error; Treatment; Type of study; WTW Oxi 340i probe
    Type: Dataset
    Format: text/tab-separated-values, 238 data points
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2023-09-30
    Description: The world's oceans are acidifying and warming as a result of increasing atmospheric CO2 concentrations. The thermal tolerance of fish greatly depends on the cardiovascular ability to supply the tissues with oxygen. The highly oxygen-dependent heart mitochondria thus might play a key role in shaping an organism's tolerance to temperature. The present study aimed to investigate the effects of acute and chronic warming on the respiratory capacity of European sea bass (Dicentrarchus labrax L.) heart mitochondria. Broodstock fish were caught in the Gulf of Morbihan, France. Larvae were raised at the aquaculture facility Aquastream (Ploemeur-Lorient, France) and obtained at 2 dph (20 January 2016). European sea bass were reared in the laboratory in six ocean acidification and warming (OAW) conditions: two temperatures (warm and cold life condition) and three PCO2 conditions (control, Δ500 and Δ1000). Conditions were chosen to follow the predictions of the IPCC for the next 130 years: ΔT = 5°C and ΔPCO2 = 500 and 1000 µatm, following RCP 6.0 and RCP 8.5 respectively. The fish were reared under these conditions from 3 dph (days post hatch) until mitochondrial respiration measurements at 3700 to 4100 dd (degree days, 183–199 dph and 234–249 dph in warm and cold life conditioned fish, respectively). During the experimental period, fish of all three PCO2 conditions of the respective temperature were used for mitochondrial respiration measurements on permeabilized heart fibres. Fish were not fed for 2 days prior to the experiments. Two batches of eight fish each were processed per day. Juveniles were randomly caught from their tanks and anesthetized with MS-222. Mass, fork length and body length were directly determined with a precision balance (Mettler, Columbus, OH, USA) and a calliper, to the nearest 0.01 g and 0.01 mm, respectively. Afterwards, fish were killed by a cut through the neck, and the heart was completely dissected from the fish, followed by excavation and permeabilization of the ventricle. Tissue from a whole ventricle was used for respiration measurements in each respiration chamber of the oxygraphs and respiration rates were normalized to ventricle mass. During the permeabilization step, the livers and the carcasses of the fish were weighed to calculate the hepatosomatic index (HSI) and condition factor (K). Mitochondrial respiration of the permeabilized heart fibres was measured using four Oroboros Oxygraph-2K respirometers with DatLab 6 software (Oroboros Instruments, Innsbruck, Austria). Permeabilized fibers have the advantage of resembling the living state as closely as possible, while still allowing control of the supply of substrates and inhibitors to the mitochondria (Saks et al., 1998; Pesta and Gnaiger, 2012). Measurements were conducted at 15 and 20°C for all treatments to determine the effect of acute temperature changes on mitochondrial metabolism in vitro. A standard substrate–uncoupler–inhibitor titration protocol was employed to measure the respiration rates of the different complexes. Residual respiration after antimycin A addition was used to correct all mitochondrial respiration rates.
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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  • 3
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    Unknown
    PANGAEA
    In:  Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven | Supplement to: Kunz, Kristina Lore; Claireaux, Guy; Pörtner, Hans-Otto; Knust, Rainer; Mark, Felix Christopher (2018): Aerobic capacities and swimming performance of polar cod (Boreogadus saida) under ocean acidification and warming conditions. Journal of Experimental Biology, 221(21), jeb184473, https://doi.org/10.1242/jeb.184473
    Publication Date: 2023-09-28
    Description: Polar cod (Boreogadus saida) were acclimated for four months to different temperatures (0, 3, 6, 8°C) and PCO2 (390 and 1170 µatm) conditions. Subsequently, B. saida were exercised in a Brett-type swimming tunnel at their respective acclimation conditions the fourth day after feeding. The swimming protocol involved a careful increase in water speed of 1.9 ± 0.3 cm/sec after 11 min. The onset of burst-type swimming behavior indicated the transition from purely aerobic to partly anaerobic swimming speed (Ugait). The critical swimming speed (Ucrit) was reached as soon as the fish touched the grid for at least 30 sec. Ucrit was further adjusted according to Brett (1964). At each velocity step, burst-type swimming events were counted twice for 30 sec after 5 and 10 min. The maximum burst count (max. BC) as well as the number of total bursts throughout the protocol served to classify the individual anaerobic swimming performance of B. saida. Additionally, individual burst events per velocity step are listed ("Burst counts per velocity step_specimen 1-5", https://doi.pangaea.de/10.1594/PANGAEA.889446). Furthermore, a duration of one second per burst was assumed in order to estimate the contribution of anaerobic metabolism (tsbanaerob) during the time between Ugait and Ucrit ("time spent bursting", tsb). Immediately after the termination of the swimming protocol, the aerobic performance of B. saida was recorded in a separate intermittent-flow respiration setup. The initial 5 min of the slope of the first ṀO₂ recording was defined as the maximum metabolic rate (MMR) evoked by exercise. Fish remained in the respiration chambers for approximately 48 h. The standard metabolic rate (SMR) was calculated as the 15%-quantile among ṀO₂ records starting from the second night in the respiration chamber. The difference between MMR and SMR characterized the individual aerobic scope of exercise (AS). The ratio Ucrit/MMR was introduced in order to estimate the energetic efficiency of maximum swimming performance (Emax).
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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  • 4
    Publication Date: 2023-09-28
    Description: Ongoing climate change is leading to warmer and more acidic oceans. The future distribution of fish within the oceans depends on their capacity to adapt to these new environments. Only few studies have examined the effects of ocean acidification (OA) and warming (OW) on the metabolism of long-lived fish over successive generations. We therefore aimed to investigate the effect of OA on larval and juvenile growth and metabolism on two successive generations of European sea bass (Dicentrarchus labrax L.) as well as the effect of OAW on larval and juvenile growth and metabolism of the second generation. European sea bass is a large economically important fish species with a long generation time. F0 larvae were produced at the aquaculture facility Aquastream (Ploemeur-Lorient, France) and obtained at 2 days post-hatch (dph). From 2 dph F0 larvae were reared in the laboratory in two PCO2 conditions (ambient and Δ1000). Larval rearing was performed in a temperature controlled room and water temperatures were fixed to 19°C in F0. In juveniles and adults, water temperatures of F0 sea bass were adjusted to ambient temperature in the Bay of Brest during summer (up to 19°C), but were kept constant at 15 and 12°C for juveniles and adults, respectively, when ambient temperature decreased below these values. F1 embryos were obtained by artificial reproduction of F0 broodstock fish. Fertilized eggs were incubated at 15°C and at the same PCO2 conditions as respective F0. Division of F1 larvae from egg rearing tanks into experimental tanks took place at 2 dph. F1 larvae were reared in four OAW conditions: two temperatures (cold and warm life condition, C and W) and two PCO2 conditions (ambient and Δ1000). Larval rearing was performed in a temperature controlled room and water temperatures were fixed to 15 and 20°C for C and W larvae, respectively. In juveniles, water temperatures of F1 sea bass were adjusted to ambient temperature in the Bay of Brest during summer (up to 19°C), but were kept constant at 15°C when ambient temperature decreased below these values. F1-W was always 5°C warmer than the F1-C treatment. OAW conditions for F0 and F1 rearing were chosen to follow the predictions of the IPCC for the next 130 years: ΔT = 5°C and ΔPCO2 = 1000 µatm, following RCP 8.5. We analysed larval and juvenile growth in F0 and F1. Larval routine metabolic rates (RMR, in F1), juvenile standard metabolic rates (SMR, in F0 and F1) and juvenile critical oxygen concentrations (PO2crit, in F0 and F1) were obtained on individuals via intermittent flow-respirometry. Measurements were conducted at the rearing conditions of the respective larva or juvenile. Fish were fasted for 3h and 48-72h for larvae and juveniles, respectively. After the respirometry trial, larvae were photographed to measure there body length and frozen until measurement of dry mass. Juveniles body length and wet mass was directly determined with calipers and a balance.
    Keywords: juvenile growth; Laboratory experiment; larval growth; metabolic rates; Ocean acidification; ocean warming; teleost
    Type: Dataset
    Format: application/zip, 3 datasets
    Location Call Number Limitation Availability
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  • 5
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    Unknown
    PANGAEA
    In:  Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven
    Publication Date: 2023-09-28
    Keywords: Burst counts, mean; Burst counts per velocity step; Carbon dioxide, partial pressure; Temperature, water; Velocity
    Type: Dataset
    Format: text/tab-separated-values, 831 data points
    Location Call Number Limitation Availability
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  • 6
    Publication Date: 2023-09-28
    Keywords: Alkalinity, total; Alkalinity, total, standard error; Calculated; Calculated using CO2SYS; Carbon dioxide (water) partial pressure; Conductivity meter, WTW, LF 323; Oxygen, dissolved; Oxygen, dissolved, standard error; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error; pH; pH, standard error; pH meter (WTW 3110) with electrode (WTW Sentix 41); Salinity; Salinity, standard error; Temperature, water; Temperature, water, standard error; Treatment; WTW Oxi 340i probe
    Type: Dataset
    Format: text/tab-separated-values, 170 data points
    Location Call Number Limitation Availability
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  • 7
    Publication Date: 2024-01-26
    Description: Ongoing climate change is leading to warmer and more acidic oceans. The future distribution of fish within the oceans depends on their capacity to adapt to these new environments. Only few studies have examined the effects of ocean acidification (OA) and warming (OW) on the metabolism of long-lived fish over successive generations. We therefore aimed to investigate the effect of OA on larval and juvenile growth and metabolism on two successive generations of European sea bass (Dicentrarchus labrax L.) as well as the effect of OAW on larval and juvenile growth and metabolism of the second generation. European sea bass is a large economically important fish species with a long generation time. F0 larvae were produced at the aquaculture facility Aquastream (Ploemeur-Lorient, France) and obtained at 2 days post-hatch (dph). From 2 dph F0 larvae were reared in the laboratory in two PCO2 conditions (ambient and Δ1000). Larval rearing was performed in a temperature controlled room and water temperatures were fixed to 19°C in F0. In juveniles and adults, water temperatures of F0 sea bass were adjusted to ambient temperature in the Bay of Brest during summer (up to 19°C), but were kept constant at 15 and 12°C for juveniles and adults, respectively, when ambient temperature decreased below these values. F1 embryos were obtained by artificial reproduction of F0 broodstock fish. Fertilized eggs were incubated at 15°C and at the same PCO2 conditions as respective F0. Division of F1 larvae from egg rearing tanks into experimental tanks took place at 2 dph. F1 larvae were reared in four OAW conditions: two temperatures (cold and warm life condition, C and W) and two PCO2 conditions (ambient and Δ1000). Larval rearing was performed in a temperature controlled room and water temperatures were fixed to 15 and 20°C for C and W larvae, respectively. In juveniles, water temperatures of F1 sea bass were adjusted to ambient temperature in the Bay of Brest during summer (up to 19°C), but were kept constant at 15°C when ambient temperature decreased below these values. F1-W was always 5°C warmer than the F1-C treatment. OAW conditions for F0 and F1 rearing were chosen to follow the predictions of the IPCC for the next 130 years: ΔT = 5°C and ΔPCO2 = 1000 µatm, following RCP 8.5. We analysed larval and juvenile growth in F0 and F1. Larval routine metabolic rates (RMR, in F1), juvenile standard metabolic rates (SMR, in F0 and F1) and juvenile critical oxygen concentrations (PO2crit, in F0 and F1) were obtained on individuals via intermittent flow-respirometry. Measurements were conducted at the rearing conditions of the respective larva or juvenile. Fish were fasted for 3h and 48-72h for larvae and juveniles, respectively. After the respirometry trial, larvae were photographed to measure there body length and frozen until measurement of dry mass. Juveniles body length and wet mass was directly determined with calipers and a balance.
    Keywords: Age; Caliper; DATE/TIME; Dicentrarchus labrax, body length; Dicentrarchus labrax, dry mass; Dicentrarchus labrax, mass; Generation; juvenile growth; Laboratory experiment; larval growth; Life stage; metabolic rates; Ocean acidification; ocean warming; Sample ID; Species; Tank number; teleost; Treatment: partial pressure of carbon dioxide; Treatment: temperature; Type of study; Uniform resource locator/link to reference; Weighted
    Type: Dataset
    Format: text/tab-separated-values, 27724 data points
    Location Call Number Limitation Availability
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  • 8
    Publication Date: 2024-01-26
    Keywords: Body length; Calculated; Complex II respiration rate of total mitochondrial respiration rate; Complex I respiration rate of total mitochondrial respiration rate; DATE/TIME; Dicentrarchus labrax, mass; Fish, wet weighted; Fulton's condition factor; Heart, mass; Hepatosomatic index; Identification; Instrument; Liver, mass; Measured using callipers; Mitochondrial complex IV capacity; Mitochondrial leak respiration rate; Mitochondrial respiration rate, complex I; Mitochondrial respiration rate, complex II; Mitochondrial respiration rate, complex IV; Mitochondrial respiration rate, electron transport; Proton leak of total mitochondrial respiration rate; Respiratory control ratio; Respirometer, Oroboros Oxygraph-2K; Run ID; Sample ID; Specimen identification; Tank number; Temperature, water; Tissue, mass; Treatment; Treatment: temperature description; Weighted
    Type: Dataset
    Format: text/tab-separated-values, 4138 data points
    Location Call Number Limitation Availability
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  • 9
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    Unknown
    PANGAEA
    In:  Supplement to: Gutowska, Magdalena A; Melzner, Frank; Langenbuch, M; Bock, C; Claireaux, Guy; Pörtner, Hans-Otto (2010): Acid–base regulatory ability of the cephalopod (Sepia officinalis) in response to environmental hypercapnia. Journal of Comparative Physiology B-Biochemical Systemic and Environmentalphysiology, 180(3), 323-335, https://doi.org/10.1007/s00360-009-0412-y
    Publication Date: 2024-03-15
    Description: Acidification of ocean surface waters by anthropogenic carbon dioxide (CO2) emissions is a currently developing scenario that warrants a broadening of research foci in the study of acid-base physiology. Recent studies working with environmentally relevant CO2 levels, indicate that some echinoderms and molluscs reduce metabolic rates, soft tissue growth and calcification during hypercapnic exposure. In contrast to all prior invertebrate species studied so far, growth trials with the cuttlefish Sepia officinalis found no indication of reduced growth or calcification performance during long-term exposure to 0.6 kPa CO2. It is hypothesized that the differing sensitivities to elevated seawater pCO2 could be explained by taxa specific differences in acid-base regulatory capacity. In this study, we examined the acid-base regulatory ability of S. officinalis in vivo, using a specially modified cannulation technique as well as 31P NMR spectroscopy. During acute exposure to 0.6 kPa CO2, S. officinalis rapidly increased its blood [HCO3] to 10.4 mM through active ion-transport processes, and partially compensated the hypercapnia induced respiratory acidosis. A minor decrease in intracellular pH (pHi) and stable intracellular phosphagen levels indicated efficient pHi regulation. We conclude that S. officinalis is not only an efficient acid-base regulator, but is also able to do so without disturbing metabolic equilibria in characteristic tissues or compromising aerobic capacities. The cuttlefish did not exhibit acute intolerance to hypercapnia that has been hypothesized for more active cephalopod species (squid). Even though blood pH (pHe) remained 0.18 pH units below control values, arterial O2 saturation was not compromised in S. officinalis because of the comparatively lower pH sensitivity of oxygen binding to its blood pigment. This raises questions concerning the potentially broad range of sensitivity to changes in acid-base status amongst invertebrates, as well as to the underlying mechanistic origins. Further studies are needed to better characterize the connection between acid-base status and animal fitness in various marine species.
    Keywords: Acid-base regulation; Alkalinity, total; Animalia; Aragonite saturation state; Behaviour; Bicarbonate; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Calcite saturation state; Calculated; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, partial pressure; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Incubation duration; Laboratory experiment; Measured; Mollusca; Nekton; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Optical sensor (HPS-OIW); Optical sensor (PS1, PreSens); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Salinity; Sepia officinalis; Sepia officinalis, haemolymph, bicarbonate, standard deviation; Sepia officinalis, haemolymph, bicarbonate ion; Sepia officinalis, haemolymph O2; Sepia officinalis, haemolymph O2, standard deviation; Sepia officinalis, haemolymph pCO2; Sepia officinalis, haemolymph pCO2, standard deviation; Sepia officinalis, haemolymph pH; Sepia officinalis, haemolymph pH, standard deviation; Sepia officinalis, pH, intracellular; Sepia officinalis, pH, intracellular, standard deviation; Sepia officinalis, phosphate, inorganic/phospho-L-arginine ratio; Sepia officinalis, phosphate, inorganic/phospho-L-arginine ratio, standard de; Sepia officinalis, ventilation frequency, changes; Sepia officinalis, ventilation frequency, changes, standard deviation; Single species; Temperate; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 1725 data points
    Location Call Number Limitation Availability
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  • 10
    Publication Date: 2024-03-15
    Description: European sea bass (Dicentrarchus labrax) is a large, economically important fish species with a long generation time whose long-term resilience to ocean acidification (OA) and warming (OW) is not clear. We incubated sea bass from Brittany (France) for two generations (〉5 years in total) under ambient and predicted OA conditions (PCO2: 650 and 1700 µatm) crossed with ambient and predicted ocean OW conditions in F1 (temperature: 15-18°C and 20-23°C) to investigate the effects of climate change on larval and juvenile growth and metabolic rate. We found that in F1, OA as single stressor at ambient temperature did not affect larval or juvenile growth and OW increased developmental time and growth rates, but OAW decreased larval size at metamorphosis. Larval routine and juvenile standard metabolic rates were significantly lower in cold compared to warm conditioned fish and also lower in F0 compared to F1 fish. We did not find any effect of OA as a single stressor on metabolic rates. Juvenile PO2crit was not affected by OA or OAW in both generations. We discuss the potential underlying mechanisms resulting in the resilience of F0 and F1 larvae and juveniles to OA and in the beneficial effects of OW on F1 larval growth and metabolic rate, but on the other hand in the vulnerability of F1, but not F0 larvae to OAW. With regard to the ecological perspective, we conclude that recruitment of larvae and early juveniles to nursery areas might decrease under OAW conditions but individuals reaching juvenile phase might benefit from increased performance at higher temperatures.
    Keywords: Age; Alkalinity, total; Alkalinity, total, standard error; Animalia; Aragonite saturation state; Bicarbonate ion; Body length; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Caliper; Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chordata; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); DATE/TIME; Dicentrarchus labrax; Dry mass; Fish, wet weighted; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Fulton's condition factor; Generation; Growth/Morphology; Identification; Laboratory experiment; Length; Life stage; Mass; Metabolic rate of oxygen; Multiprobe, WTW 340i; Nekton; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Optical oxygen meter with sensor OXR50 (FireSting, PyroScience GmbH, Germany); Optical oxygen meter with sensor OXROB10 (FireSting, PyroScience GmbH, Germany); Oxygen, dissolved; Oxygen, dissolved, standard error; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error; Pelagos; pH; pH, standard error; Phosphate; Phosphate, standard error; Potentiometric; Respiration; Salinity; Salinity, standard error; Salinometer (WTW LF325, Xylem Analytics Germany, Weilheim, Germany); Sample ID; SEAL AA3 segmented flow autoanalyzer; Silicate; Silicate, standard error; Single species; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Spectrophotometric; Stereomicroscopy (Leica); Tank number; Temperate; Temperature; Temperature, water; Temperature, water, standard error; Treatment: partial pressure of carbon dioxide; Treatment: temperature; Type; Weighted; WTW Oxi 340i probe
    Type: Dataset
    Format: text/tab-separated-values, 89955 data points
    Location Call Number Limitation Availability
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