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  • PANGAEA  (33)
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  • 1
    Publication Date: 2023-03-14
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; BIOACID; Biological Impacts of Ocean Acidification; Calculated using CO2SYS; Carbon, total; Carbon, total, standard deviation; Carbon dioxide, partial pressure; Carbon dioxide, partial pressure, standard deviation; Colorimetry; DATE/TIME; Incubation duration; pH; pH, standard deviation; pH meter KNICK Model 761
    Type: Dataset
    Format: text/tab-separated-values, 120 data points
    Location Call Number Limitation Availability
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  • 2
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    PANGAEA
    In:  Supplement to: Gärdes, Astrid; Iversen, Morten Hvitfeldt; Grossart, Hans-Peter; Passow, Uta; Ullrich, Matthias S (2011): Diatom-associated bacteria are required for aggregation of Thalassiosira weissflogii. The ISME Journal, 5(3), 436-445, https://doi.org/10.1038/ismej.2010.145
    Publication Date: 2023-05-12
    Description: Aggregation of algae, mainly diatoms, is an important process in marine systems leading to the settling of particulate organic carbon predominantly in the form of marine snow. Exudation products of phytoplankton form transparent exopolymer particles (TEP), which acts as the glue for particle aggregation. Heterotrophic bacteria interacting with phytoplankton may influence TEP formation and phytoplankton aggregation. This bacterial impact has not been explored in detail. We hypothesized that bacteria attaching to Thalassiosira weissflogii might interact in a yet-to-be determined manner, which could impact TEP formation and aggregate abundance. The role of individual T. weissflogii-attaching and free-living new bacterial isolates for TEP production and diatom aggregation was investigated in vitro. T. weissflogii did not aggregate in axenic culture, and striking differences in aggregation dynamics and TEP abundance were observed when diatom cultures were inoculated with either diatom-attaching or free-living bacteria. The data indicated that free-living bacteria might not influence aggregation whereas bacteria attaching to diatom cells may increase aggregate formation. Interestingly, photosynthetically inactivated T. weissflogii cells did not aggregate regardless of the presence of bacteria. Comparison of aggregate formation, TEP production, aggregate sinking velocity and solid hydrated density revealed remarkable differences. Both, photosynthetically active T. weissflogii and specific diatom-attaching bacteria were required for aggregation. It was concluded that interactions between heterotrophic bacteria and diatoms increased aggregate formation and particle sinking and thus may enhance the efficiency of the biological pump.
    Keywords: Center for Marine Environmental Sciences; DIVER; German_Bight_1997-1999; German_Wadden_Sea_2000; German Bight, North Sea; German Bight Wadden Sea; German Wadden Sea; MARUM; PLA; Plankton net; Sampling by diver
    Type: Dataset
    Format: application/zip, 4 datasets
    Location Call Number Limitation Availability
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  • 3
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    PANGAEA
    In:  Supplement to: Wannicke, Nicola; Endres, Sonja; Engel, Anja; Grossart, Hans-Peter; Unger, Juliane; Voss, Maren (2012): Response of Nodularia spumigena to pCO2 - Part 1: Growth, production and nitrogen cycling. Biogeosciences, 9(8), 2973-2988, https://doi.org/10.5194/bg-9-2973-2012
    Publication Date: 2023-05-12
    Description: Heterocystous cyanobacteria of the genus Nodularia form extensive blooms in the Baltic Sea and contribute substantially to the total annual primary production. Moreover, they dispense a large fraction of new nitrogen to the ecosystem when inorganic nitrogen concentration in summer is low. Thus, it is of ecological importance to know how Nodularia will react to future environmental changes, in particular to increasing carbon dioxide (CO2) concentrations and what consequences there might arise for cycling of organic matter in the Baltic Sea. Here, we determined carbon (C) and dinitrogen (N2) fixation rates, growth, elemental stoichiometry of particulate organic matter and nitrogen turnover in batch cultures of the heterocystous cyanobacterium Nodularia spumigena under low (median 315 µatm), mid (median 353 µatm), and high (median 548 µatm) CO2 concentrations. Our results demonstrate an overall stimulating effect of rising pCO2 on C and N2 fixation, as well as on cell growth. An increase in pCO2 during incubation days 0 to 9 resulted in an elevation in growth rate by 84 ± 38% (low vs. high pCO2) and 40 ± 25% (mid vs. high pCO2), as well as in N2 fixation by 93 ± 35% and 38 ± 1%, respectively. C uptake rates showed high standard deviations within treatments and in between sampling days. Nevertheless, C fixation in the high pCO2 treatment was elevated compared to the other two treatments by 97% (high vs. low) and 44% (high vs. mid) at day 0 and day 3, but this effect diminished afterwards. Additionally, elevation in carbon to nitrogen and nitrogen to phosphorus ratios of the particulate biomass formed (POC : POP and PON : POP) was observed at high pCO2. Our findings suggest that rising pCO2 stimulates the growth of heterocystous diazotrophic cyanobacteria, in a similar way as reported for the non-heterocystous diazotroph Trichodesmium. Implications for biogeochemical cycling and food web dynamics, as well as ecological and socio-economical aspects in the Baltic Sea are discussed.
    Keywords: BIOACID; Biological Impacts of Ocean Acidification
    Type: Dataset
    Format: application/zip, 3 datasets
    Location Call Number Limitation Availability
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  • 4
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    PANGAEA
    In:  Supplement to: Klawonn, Isabell; Eichner, Meri J; Wilson, Samuel T; Moradi, Nasrollah; Thamdrup, Bo; Kümmel, Steffen; Gehre, Matthias; Khalili, Arzhang; Grossart, Hans-Peter; Karl, David Michael; Ploug, Helle (2020): Distinct nitrogen cycling and steep chemical gradients in Trichodesmium colonies. The ISME Journal, 14(2), 399-412, https://doi.org/10.1038/s41396-019-0514-9
    Publication Date: 2023-01-13
    Description: Trichodesmium is an important dinitrogen (N~2~)-fixing cyanobacterium in marine ecosystems. Recent nucleic acid analyses indicate that Trichodesmium colonies with their diverse epibionts support various nitrogen (N) transformations beyond N~2~-fixation. However, rates of these transformations and concentration gradients of N-compounds in Trichodesmium colonies remain largely unresolved. We combined isotope-tracer incubations, micro-profiling, and numeric modelling to explore carbon fixation, N-cycling processes, as well as oxygen, ammonium and nitrate concentration gradients in individual field-sampled Trichodesmium colonies. Colonies were net-autotrophic, with carbon and N~2~-fixation occurring mostly at day-time. Ten percent of the fixed N was released as ammonium after 12-hour incubations. Nitrification was not detectable but nitrate consumption was high when nitrate was added. The consumed nitrate was partly reduced to ammonium, while denitrification was insignificant. Thus, the potential N-transformation network was characterized by fixed N gain and recycling processes rather than denitrification. Oxygen concentrations within colonies were 60–200% air-saturation. Moreover, our modelling predicted steep concentration gradients, with up to 6-fold higher ammonium concentrations, and nitrate depletion in the colony centre compared to the ambient seawater. These gradients created a chemically heterogeneous microenvironment, presumably facilitating diverse microbial metabolisms in millimetre-sized Trichodesmium colonies.
    Keywords: Computer-simulated concentration profiles; File format; File name; File size; Microsensor concentration profiles; Uniform resource locator/link to file
    Type: Dataset
    Format: text/tab-separated-values, 12 data points
    Location Call Number Limitation Availability
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  • 5
    Publication Date: 2023-05-12
    Keywords: Bacterial abundance in colony forming units; Center for Marine Environmental Sciences; German_Wadden_Sea_2000; German Bight Wadden Sea; German Wadden Sea; MARUM; PLA; Plankton net; see reference(s); Time coverage
    Type: Dataset
    Format: text/tab-separated-values, 28 data points
    Location Call Number Limitation Availability
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  • 6
    Publication Date: 2023-05-12
    Keywords: Best match; Center for Marine Environmental Sciences; German_Wadden_Sea_2000; German Bight Wadden Sea; German Wadden Sea; MARUM; PLA; Plankton net; see reference(s); Similarity; Strain
    Type: Dataset
    Format: text/tab-separated-values, 99 data points
    Location Call Number Limitation Availability
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  • 7
    Publication Date: 2023-05-12
    Keywords: Best match; Center for Marine Environmental Sciences; DIVER; German_Bight_1997-1999; German Bight, North Sea; MARUM; Sampling by diver; see reference(s); Similarity; Strain
    Type: Dataset
    Format: text/tab-separated-values, 93 data points
    Location Call Number Limitation Availability
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  • 8
    Publication Date: 2023-05-12
    Keywords: Center for Marine Environmental Sciences; German_Wadden_Sea_2000; German Bight Wadden Sea; German Wadden Sea; Group; MARUM; PLA; Plankton net; Sample code/label; see reference(s); Strain
    Type: Dataset
    Format: text/tab-separated-values, 63 data points
    Location Call Number Limitation Availability
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  • 9
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    PANGAEA
    In:  GEOMAR - Helmholtz Centre for Ocean Research Kiel | Supplement to: Engel, Anja; Piontek, Judith; Grossart, Hans-Peter; Riebesell, Ulf; Schulz, Kai Georg; Sperling, Martin (2014): Impact of CO2 enrichment on organic matter dynamics during nutrient induced coastal phytoplankton blooms. Journal of Plankton Research, 36(3), 641-657, https://doi.org/10.1093/plankt/fbt125
    Publication Date: 2024-02-01
    Description: A mesocosm experiment was conducted to investigate the impact of rising fCO2 on the build-up and decline of organic matter during coastal phytoplankton blooms. Five mesocosms (~38 m³ each) were deployed in the Baltic Sea during spring (2009) and enriched with CO2 to yield a gradient of 355-862 µatm. Mesocosms were nutrient fertilized initially to induce phytoplankton bloom development. Changes in particulate and dissolved organic matter concentrations, including dissolved high-molecular weight (〉1 kDa) combined carbohydrates, dissolved free and combined amino acids as well as transparent exopolymer particles (TEP), were monitored over 21 days together with bacterial abundance, and hydrolytic extracellular enzyme activities. Overall, organic matter followed well-known bloom dynamics in all CO2 treatments alike. At high fCO2, higher dPOC:dPON during bloom rise, and higher TEP concentrations during bloom peak, suggested preferential accumulation of carbon-rich components. TEP concentration at bloom peak was significantly related to subsequent sedimentation of particulate organic matter. Bacterial abundance increased during the bloom and was highest at high fCO2. We conclude that increasing fCO2 supports production and exudation of carbon-rich components, enhancing particle aggregation and settling, but also providing substrate and attachment sites for bacteria. More labile organic carbon and higher bacterial abundance can increase rates of oxygen consumption and may intensify the already high risk of oxygen depletion in coastal seas in the future.
    Keywords: BIOACID; Biological Impacts of Ocean Acidification; SOPRAN; Surface Ocean Processes in the Anthropocene
    Type: Dataset
    Format: application/zip, 2 datasets
    Location Call Number Limitation Availability
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  • 10
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    PANGAEA
    In:  Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven
    Publication Date: 2024-01-12
    Keywords: AWI_PhyOce; CT; DATE/TIME; DEPTH, water; German Bight, North Sea; HE350; HE350-track; Heincke; LATITUDE; LONGITUDE; Physical Oceanography @ AWI; Salinity; Temperature, water; Thermosalinograph; TSG; Underway cruise track measurements
    Type: Dataset
    Format: text/tab-separated-values, 1146 data points
    Location Call Number Limitation Availability
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