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  • 1
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    Marine vertebrate zoonoses : an overview of the DAO Special Issue (2011)
    Inter-Research
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Inter-Research, 2008. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Diseases of Aquatic Organisms 81 (2008): 1-3, doi:10.3354/dao01940.
    Description: The role of marine birds, mammals, turtles and fish as vectors of infectious agents of potential risk to humans can be examined from a variety of perspectives. The studies in this DAO Special include a broad survey of multiple agents and species, a sequencing study of Giardia intestinalis haplotypes known to be pathogenic to humans, an assessment of risks to humans working with marine mammals, a source tracking study using E. coli ribotypes, studies of regional Salmonella and Brucella epizootiology, a serology survey and a case report of a herpes simplex infection in a dolphin. Additionally, a recently published study (Venn-Watson et al. 2008; Dis Aquat Org 79:87–93) classifying pure cultures of bacteria from a captive dolphin colony also pertains to this theme. These studies raise the following questions: whether the presence of zoonotic agents in marine vertebrates represents a risk to other marine vertebrates, humans, or both; what are the routes by which these marine vertebrate zoonotic infections are acquired and circulated in the marine ecosystem; to what degree are such agents subclinical versus causes of overt disease in marine vertebrates; what are the subsets of the human population most likely to be affected by such infections; and which human health preventive measures would seem reasonable?
    Keywords: Zoonosis ; Marine ; Vertebrate
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
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    Environmental distribution and persistence of Quahog Parasite Unknown (QPX) (2013)
    Inter-Research
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Inter-Research, 2008. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Diseases of Aquatic Organisms 81 (2008): 219-229, doi:10.3354/dao01948.
    Description: Quahog Parasite Unknown (QPX) is the cause of mass mortality events of hard clams Mercenaria mercenaria from Virginia, USA, to New Brunswick, Canada. Aquaculture areas in Massachusetts, USA, have been particularly hard hit. The parasite has been shown to be a directly infective organism, but it is unclear whether it could exist or persist outside of its clam host. We used molecular methods to examine water, sediment, seaweeds, seagrass and various invertebrates for the presence of QPX. Sites in Virginia and Massachusetts were selected based upon the incidence of QPX-induced clam die-offs, and they were monitored seasonally. QPX was detectable in almost all of our different sample types from Massachusetts, indicating that the parasite was widely distributed in the environment. Significantly more samples from Massachusetts were positive than from Virginia, and there was a seasonal pattern to the types of samples positive from Massachusetts. The data suggest that, although it may be difficult to completely eradicate QPX from the environment, it may be possible to keep the incidence of disease under control through good plot husbandry and the removal of infected and dying clams.
    Description: This work is the result of research sponsored by NOAA National Sea Grant College Program Office, Department of Commerce, under Grant No. NA16RG2273, Woods Hole Oceanographic Institution Sea Grant Project No. R/B-168.
    Keywords: Quahog Parasite Unknown ; QPX ; Environmental detection ; Remediation
    Repository Name: Woods Hole Open Access Server
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  • 3
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    Linking bacterivory and phyletic diversity of protists with a marker gene survey and experimental feeding with BrdU-labeled bacteria (2014)
    Inter-Research
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Inter-Research, 2013. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Aquatic Microbial Ecology 71 (2013):141-153, doi:10.3354/ame01674.
    Description: Over the last few decades, molecular methods have vastly improved our ability to study the diversity of microbial communities. In molecular diversity surveys, the function of protists is often inferred from phylogeny. Yet these surveys are unable to distinguish between different trophic modes among closely related taxa. Here we present results from a culture-independent study linking bacterivory to the diversity of pelagic protists from 3 depths of a stratified mesotrophic lake. Bacteria were labeled with bromodeoxyuridine (BrdU) and added to lakewater samples; after incubation, total DNA was extracted from filtered samples. Part of the DNA extract was subjected to immunoprecipitation with anti-BrdU antibodies, and then both whole DNA and BrdU-labeled samples were analyzed using 454-pyrosequencing of the v9 region of 18S small subunit rRNA gene amplicons. The results show that a different community of protists exists at each depth, with limited overlap of taxonomic composition between depths. The community of BrdU-labeled protists, deemed putative bacterivores, is largely a subset of the community found in the whole DNA samples. Many of these BrdU-labeled taxa are poorly represented in GenBank and thus are probably rarely isolated and/or uncultured species. Several of the taxa identified as bacterivores are also phototrophs, highlighting the important role of mixotrophy among eukaryotic microbes. Definitive identity of functional traits among taxa requires careful experimentation, yet this method allows a first-pass assay of the trophic role of microbial eukaryotes from environmental samples.
    Description: This work was funded in part by NSF grants OPP-0838847 and OPP-0838955.
    Keywords: Molecular methods ; Microbial community ; Mixotrophy ; Bromodeoxyuridine ; Culture-independent ; Eukaryotic microbes ; Pyrosequencing ; Lake microbes
    Repository Name: Woods Hole Open Access Server
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  • 4
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    Community structure of marine sedimentary protists in relation to flow and grain size (2011)
    Inter-Research
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Inter-Research, 2007. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Aquatic Microbial Ecology 48 (2007): 91-104, doi:10.3354/ame048091.
    Description: Populations of unicellular, marine sedimentary protists are constrained by a variety of physical environmental factors, but influences of flow regime have rarely been studied. We compared community structure among 3 subtidal sites differing in flow strength and grain size in a coastal bay. We used denaturing gradient gel electrophoresis (DGGE) to assess eukaryotic diversity based on 18S rDNA, and quantitative Protargol staining (QPS) to examine ciliate communities by microscopy. Sedimentary 18S rDNA in mid-summer was dominated by diatoms. Analyses of gel bands by presence/ absence among sites, dendogram, and multidimensional scaling showed that eukaryotic community structure was related to grain size more strongly than to flow regime. Among bands identified as diatoms by recovery and sequence analysis, 4 taxa (40%) differed among sites in relation to flow strength, and 2 taxa (29%) differed in relation to grain size. No bands had sequences matching ciliates, but QPS showed that 6 ciliate species (20%) were distributed in relation to flow, and 10 species (33%), in relation to grain size. Ciliate species richness and community similarity were greatest for the 2 strong-flow sites, despite differences in mean grain size. The strong-flow, silty site had the highest concentrations of chlorophyll a, total ciliates, karyorelictids, and scuticociliates, and the lowest ciliate species diversity. DGGE was run again for this site 1 mo later and revealed a shift in the rDNA pool to dominance by metazoans. Flow regime and grain size may be important factors structuring subtidal communities of sedimentary protists.
    Description: This work was supported by Franklin & Marshall College and the Woods Hole Center for Oceans and Human Health (NIEHS P50 ES012742 & NSF OCE0430724).
    Keywords: Ciliates ; Diatoms ; Benthic ; Community structure ; Flow ; Grain size ; DGGE
    Repository Name: Woods Hole Open Access Server
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  • 5
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    Mixotrophy : a widespread and important ecological strategy for planktonic and sea-ice nanoflagellates in the Ross Sea, Antarctica (2011)
    Inter-Research
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Inter-Research, 2009. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Aquatic Microbial Ecology 54 (2009): 269-277, doi:10.3354/ame01276.
    Description: Mixotrophic nanoflagellates (MNF) were quantified in plankton and sea ice of the Ross Sea, Antarctica, during austral spring. Tracer experiments using fluorescently labeled bacteria (FLB) were conducted to enumerate MNF and determine their contribution to total chloroplastidic and total bacterivorous nanoflagellates. Absolute abundances of MNF were typically 〈200 ml–1 in plankton assemblages south of the Polar Front, but they comprised 8 to 42% and 3 to 25% of bacterivorous nanoflagellates in the water column and ice cores, respectively. Moreover, they represented up to 10% of all chloroplastidic nanoflagellates in the water column when the prymnesiophyte Phaeocystis antarctica was blooming (up to 23% if P. antarctica, which did not ingest FLB, was excluded from calculations). In ice cores, MNF comprised 5 to 10% of chloroplastidic nanoflagellates. The highest proportions of MNF were found in some surface water samples and in plankton assemblages beneath ice, suggesting a potentially large effect as bacterial grazers in those locations. This study is the first to report abundances and distributions of mixotrophic flagellates in the Southern Ocean. The presence of MNF in every ice and water sample examined suggests that mixotrophy is an important alternative dietary strategy in this region.
    Description: This work was supported by NSF grant OPP-0125833 to D.A.C. and R.J.G.
    Keywords: Ross Sea ; Antarctica ; Mixotrophy ; Mixotrophic nanoflagellates ; Bacterivory ; Plankton ; Sea ice ; Fluorescently labeled bacteria
    Repository Name: Woods Hole Open Access Server
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  • 6
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    Victims or vectors : a survey of marine vertebrate zoonoses from coastal waters of the Northwest Atlantic (2011)
    Inter-Research
    Details
    Publication Date: 2022-05-26
    Description: Author Posting. © Inter-Research, 2008. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Diseases of Aquatic Organisms 81 (2008): 13-38, doi:10.3354/dao01936.
    Description: Surveillance of zoonotic pathogens in marine birds and mammals in the Northwest Atlantic revealed a diversity of zoonotic agents. We found amplicons to sequences from Brucella spp., Leptospira spp., Giardia spp. and Cryptosporidium spp. in both marine mammals and birds. Avian influenza was detected in a harp seal and a herring gull. Routine aerobic and anaerobic culture showed a broad range of bacteria resistant to multiple antibiotics. Of 1460 isolates, 797 were tested for resistance, and 468 were resistant to one or more anti-microbials. 73% (341/468) were resistant to 1–4 drugs and 27% (128/468) resistant to 5–13 drugs. The high prevalence of resistance suggests that many of these isolates could have been acquired from medical and agricultural sources and inter-microbial gene transfer. Combining birds and mammals, 45% (63/141) of stranded and 8% (2/26) of by-caught animals in this study exhibited histopathological and/or gross pathological findings associated with the presence of these pathogens. Our findings indicate that marine mammals and birds in the Northwest Atlantic are reservoirs for potentially zoonotic pathogens, which they may transmit to beachgoers, fishermen and wildlife health personnel. Conversely, zoonotic pathogens found in marine vertebrates may have been acquired via contamination of coastal waters by sewage, run-off and agricultural and medical waste. In either case these animals are not limited by political boundaries and are therefore important indicators of regional and global ocean health.
    Description: This paper is a result of research funded by the National Oceanic and Atmospheric Administration (NOAA) Coastal Ocean Program under award NA05NOS4781247, the NOAA John H. Prescott Program NA05NMF4391165 and NAO6NMF4390130, and the International Fund for Animal Welfare to the Woods Hole Oceanographic Institution. Support was also provided by awards NSF OCE-0430724 and NIEHS P50ES012742 to the Woods Hole Center for Ocean and Human Health.
    Keywords: Zoonosis ; Vertebrate ; Northwest Atlantic ; Pinniped ; Cetacean ; Bird
    Repository Name: Woods Hole Open Access Server
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  • 7
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    DGGE-based detection method for Quahog Parasite Unknown (QPX) (2011)
    Inter-Research
    Details
    Publication Date: 2022-05-26
    Description: Author Posting. © Inter-Research, 2006. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Diseases of Aquatic Organisms 70 (2006): 115-122, doi:10.3354/dao070115.
    Description: Quahog Parasite Unknown (QPX) is a significant cause of hard clam Mercenaria mercenaria mortality along the northeast coast of the United States. It infects both wild and cultured clams, often annually in plots that are heavily farmed. Subclinically infected clams can be identified by histological examination of the mantle tissue, but there is currently no method available to monitor the presence of QPX in the environment. Here, we report on a polymerase chain reaction (PCR)-based method that will facilitate the detection of QPX in natural samples and seed clams. With our method, between 10 and 100 QPX cells can be detected in 1 l of water, 1 g of sediment and 100 mg of clam tissue. Denaturing gradient gel electrophoresis (DGGE) is used to establish whether the PCR products are the same as those in the control QPX culture. We used the method to screen 100 seed clams of 15 mm, and found that 10 to 12% of the clams were positive for the presence of the QPX organism. This method represents a reliable and sensitive procedure for screening both environmental samples and potentially contaminated small clams.
    Description: Quahog Parasite Unknown (QPX) is a significant cause of hard clam Mercenaria mercenaria mortality along the northeast coast of the United States. It infects both wild and cultured clams, often annually in plots that are heavily farmed. Subclinically infected clams can be identified by histological examination of the mantle tissue, but there is currently no method available to monitor the presence of QPX in the environment. Here, we report on a polymerase chain reaction (PCR)-based method that will facilitate the detection of QPX in natural samples and seed clams. With our method, between 10 and 100 QPX cells can be detected in 1 l of water, 1 g of sediment and 100 mg of clam tissue. Denaturing gradient gel electrophoresis (DGGE) is used to establish whether the PCR products are the same as those in the control QPX culture. We used the method to screen 100 seed clams of 15 mm, and found that 10 to 12% of the clams were positive for the presence of the QPX organism. This method represents a reliable and sensitive procedure for screening both environmental samples and potentially contaminated small clams.
    Keywords: Quahog Parasite Unknown ; Detection limit ; Seed clams ; SSU rDNA
    Repository Name: Woods Hole Open Access Server
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  • 8
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    Emerging zoonoses in marine mammals and seabirds of the Northeast U.S. (2007)
    IEEE
    Details
    Publication Date: 2022-05-26
    Description: Author Posting. © IEEE, 2006. Author Posting. © IEEE, 2006. This article is posted here by permission of IEEE for personal use, not for redistribution. The definitive version was published in Proceedings Oceans 2006, Boston, MA, USA, 5 pp, doi:10.1109/OCEANS.2006.306826.
    Description: In the Northeast United States, marine vertebrates come into contact with each other and with humans through a variety of mechanisms which allow for the transfer of pathogens from one taxa to another. Though there are many ways in which humans come into contact with infectious agents, there is an inadequate understanding of the prevalence of clinical and sub-clinical zoonotic agents in the marine vertebrates of the Northeast United States. We are strengthening our understanding of the issue by targeting marine mammals and seabirds of New England and screening normal and diseased individuals of this ecosystem to establish a baseline prevalence of zoonotic agents in this ecosystem. Samples from stranded, bycaught and wild marine mammals and seabirds have been found to be positive for our screened pathogens. Most notable are the diseases found in bycaught marine mammals as well as wild caught individuals. Our current focus is specifically on influenza A and B, brucellosis, leptospirosis, Giardia and Cryptosporidium. Samples for virology, bacterial screening and molecular screening are being archived and analyzed as practical. Our goal is to create an optimized PCR-based molecular detection protocol for the above agents.
    Description: This research is supported by NOAA Ocean and Human Health Initiative Grant Number NA05NOS4781247 and NOAA Prescott Grant NA05NMF4391165.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 9
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    Molecular characterization of Giardia intestinalis haplotypes in marine animals : variation and zoonotic potential (2011)
    Inter-Research
    Details
    Publication Date: 2022-05-26
    Description: Author Posting. © Inter-Research, 2008. This article is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Diseases of Aquatic Organisms 81 (2008): 39-51, doi:10.3354/dao01931.
    Description: Giardia intestinalis is a microbial eukaryotic parasite that causes diarrheal disease in humans and other vertebrates worldwide. The negative effect on quality of life and economics caused by G. intestinalis may be increased by its potential status as a zoonosis, or a disease that can be transmitted from animals to humans. The zoonotic potential of G. intestinalis has been implied for over 2 decades, with human-infecting genotypes (belonging to the 2 major subgroups, Assemblages A and B) occurring in wildlife and domesticated animals. There are recent reports of G. intestinalis in shellfish, seals, sea lions and whales, suggesting that marine animals are also potential reservoirs of human disease. However, the prevalence, genetic diversity and effect of G. intestinalis in marine environments and the role that marine animals play in transmission of this parasite to humans are relatively unexplored. Here, we provide the first thorough molecular characterization of G. intestinalis in marine vertebrates. Using a multi-locus sequencing approach, we identify human-infecting G. intestinalis haplotypes of both Assemblages A and B in the fecal material of dolphins, porpoises, seals, herring gulls Larus argentatus, common eiders Somateria mollissima and a thresher shark Alopias vulpinus. Our results indicate that G. intestinalis is prevalent in marine ecosystems, and a wide range of marine hosts capable of harboring zoonotic forms of this parasite exist. The presence of G. intestinalis in marine ecosystems raises concerns about how this disease might be transmitted among different host species.
    Description: This paper is a result of research funded under the following awards: NOAA Coastal Ocean Program award no. NA05NOS4781247, the NOAA Prescott Program award no. NA06NMF4390130, the COHH award no. NIEHS P50ES012742, and the National Science Foundation OCE award no. 0430724 given to Woods Hole Oceanographic Institution, Woods Hole, Massachusetts and the National Institutes of Health award no. AI0580C4 ‘Molecular Evolution of Eukaryotes,’ given to the Marine Biological Laboratory, Woods Hole.
    Keywords: Giardia intestinalis ; Zoonosis ; Marine birds ; Marine mammals ; Thresher shark
    Repository Name: Woods Hole Open Access Server
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