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  • 1
    Publication Date: 2022-05-25
    Description: This paper is not subject to U.S. copyright. The definitive version was published in Marine and Petroleum Geology 58A (2014): 99-116, doi:10.1016/j.marpetgeo.2014.04.009.
    Description: In addition to well established properties that control the presence or absence of the hydrate stability zone, such as pressure, temperature, and salinity, additional parameters appear to influence the concentration of gas hydrate in host sediments. The stratigraphic record at Site 17A in the Andaman Sea, eastern Indian Ocean, illustrates the need to better understand the role pore-scale phenomena play in the distribution and presence of marine gas hydrates in a variety of subsurface settings. In this paper we integrate field-generated datasets with newly acquired sedimentology, physical property, imaging and geochemical data with mineral saturation and ion activity products of key mineral phases such as amorphous silica and calcite, to document the presence and nature of secondary precipitates that contributed to anomalous porosity preservation at Site 17A in the Andaman Sea. This study demonstrates the importance of grain-scale subsurface heterogeneities in controlling the occurrence and distribution of concentrated gas hydrate accumulations in marine sediments, and document the importance that increased permeability and enhanced porosity play in supporting gas concentrations sufficient to support gas hydrate formation. The grain scale relationships between porosity, permeability, and gas hydrate saturation documented at Site 17A likely offer insights into what may control the occurrence and distribution of gas hydrate in other sedimentary settings.
    Description: The financial support for the NGHP01, from the Oil Industry Development Board, Oil and Natural Gas Corporation Ltd., GAIL (India) Ltd. and Oil India Ltd. is gratefully acknowledged. We also acknowledge the support extended by all the participating organizations of the NGHP: MoP&NG, DGH, ONGC, GAIL, OIL, NIO, NIOT, and RIL.
    Keywords: Porosity ; Permeability ; Grain size ; Indian Ocean ; Gas hydrate ; Saturation ; Volcanic ash ; Carbonate
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 2
    Publication Date: 2022-05-27
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Johnson, J. E., MacLeod, D. R., Phillips, S. C., Phillips, M. P., & Divins, D. L. Primary deposition and early diagenetic effects on the high saturation accumulation of gas hydrate in a silt dominated reservoir in the Gulf of Mexico. Marine Geology, 444, (2022): 106718, https://doi.org/10.1016/j.margeo.2021.106718.
    Description: On continental margins, high saturation gas hydrate systems (〉60% pore volume) are common in canyon and channel environments within the gas hydrate stability zone, where reservoirs are dominated by coarse-grained, high porosity sand deposits. Recent studies, including the results presented here, suggest that rapidly deposited, silt-dominated channel-levee environments can also host high saturation gas hydrate accumulations. Here we present several sedimentological data sets, including sediment composition, biostratigraphic age from calcareous nannofossils, grain size, total organic carbon (TOC), C/N elemental ratio, δ13C-TOC, CaCO3, total sulfur (TS), and δ34S-TS from sediments collected with pressure cores from a gas hydrate rich, turbidite channel-levee system in the Gulf of Mexico during the 2017 UT-GOM2-1 Hydrate Pressure Coring Expedition. Our results indicate the reservoir is composed of three main lithofacies, which have distinct sediment grain size distributions (type A-silty clay to clayey silt, type B-clayey silt, and type C-sandy silt to silty sand) that are characteristic of variable turbidity current energy regimes within a Pleistocene (〈 0.91 Ma) channel-levee environment. We document that the TOC in the sediments of the reservoir is terrestrial in origin and contained within the fine fraction of each lithofacies, while the CaCO3 fraction is composed of primarily reworked grains, including Cretaceous calcareous nannofossils, and part of the detrital load. The lack of biogenic grains within the finest grained sediment intervals throughout the reservoir suggests interevent hemipelagic sediments are not preserved, resulting in a reservoir sequence of silt dominated, stacked turbidites. We observe two zones of enhanced TS at the top and bottom of the reservoir that correspond with enriched bulk sediment δ34S, indicating stalled or slowly advancing paleo-sulfate-methane transition zone (SMTZ) positions likely driven by relative decreases in sedimentation rate. Despite these two diagenetic zones, the low abundance of diagenetic precipitates throughout the reservoir allowed the primary porosity to remain largely intact, thus better preserving primary porosity for subsequent pore-filling gas hydrate. In canyon, channel, and levee environments, early diagenesis may be regulated via sedimentation rates, where high rates result in rapid progression through the SMTZ and minimal diagenetic mineralization and low rates result in the stalling of the SMTZ, enhancing diagenetic mineralization. Here, we observed some enhanced pyritization to implicate potential sedimentation rate changes, but not enough to consume primary porosity, resulting in a high saturation gas hydrate reservoir. These results emphasize the important implications of sedimentary processes, sedimentation rates, and early diagenesis on the distribution of gas hydrate in marine sediments along continental margins.
    Description: This research and the UT-GOM2-1Hydrate Pressure Coring Expedition was supported by the U.S. Department of Energy (DOE) through Project # DE-FE0023919 “Deepwater Methane Hydrate Characterization and Scientific Assessment”. Graduate Teaching Assistant support and additional research funds for co-author MacLeod were provided through the UNH Dept. of Earth Sciences and the Jonathan W. Herndon Scholarship. Co-author Phillips was supported by funding from the U.S. Geological Survey's Coastal and Marine Hazards and Resources Program and DOE Interagency Agreement89243320SFE000013.
    Keywords: Methane hydrate ; Channel levee ; Turbidites ; Anaerobic oxidation of methane
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 3
    Publication Date: 2017-10-05
    Description: Total organic carbon (TOC) content of marine sediments represents residual carbon, originally derived from terrestrial and marine sources, which has survived seafloor and shallow subseafloor diagenesis. Ultimately, its preservation below the sulfate reduction zone in marine sediments drives methanogenesis. Within the gas hydrate stability zone (GHSZ), methane production along continental margins can supersaturate pore fluids and lead to the formation of gas hydrate. In this paper we examine the inventory and sources of TOC in sediments collected from four regions within the GHSZ along the Indian continental margins. The recovered sediments vary in age from Oligocene to recent. Mean TOC abundance is greatest in the Krishna-Godavari (K-G) Basin and decreases progressively to the Mahanadi basin, Andaman wedge, and Kerala-Konkan (K-K) Basin. This decrease in TOC is matched by a progressive increase in biogenic CaCO3 and increasing distance from terrestrial sources of organic matter and lithogenic materials. Organic carbon sources inferred from C/N and delta C-13(TOC) range from terrestrial (K-G Basin) to mixed marine and terrestrial (Mahanadi Basin), to marine dominant (Andaman wedge and K-K Basin). In the K-G Basin, variation in the bulk delta C-13(TOC) is consistent with changes in C-3 and C-4 vegetation driven by monsoon variability on glacial-interglacial timescales, whereas in the Mahanadi Basin a shift in the delta C-13(TOC) likely reflects the onset of C-4 plant deposition in the Late Miocene. A large shift the delta C-13(TOC) in the K-K basin is consistent with a change from C-3 to C-4 dominated plants during the middle Miocene. We observe a close relationship between TOC content and gas hydrate saturation, but consider the role of sedimentation rates on the preservation of TOC in the zone of methanogenesis and advective flow of methane from depth. Although TOC contents are sufficient for in situ methanogenesis at all the sites where gas hydrates were observed or inferred from proxy data, seismic, borehole log, pressure core, and gas composition data coupled with relatively high observed gas hydrate saturations suggest that advective gas transport may also play a role in the saturation of methane and the formation of gas hydrates in these regions. Although TOC content may be a first order indicator for gas hydrate potential, the structural and stratigraphic geologic environment along a margin will most likely dictate where the greatest gas hydrate saturations will occur.
    Type: Article , PeerReviewed
    Format: text
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  • 4
    Publication Date: 2013-08-29
    Description: Background: A composite biological structure, such as an insect head or abdomen, contains many internal structures with distinct functions. Composite structures are often used in RNA-seq studies, though it is unclear how expression of the same gene in different tissues and structures within the same structure affects the measurement (or even utility) of the resulting patterns of gene expression. Here we determine how complex composite tissue structure affects measures of gene expression using RNA-seq. Results: We focus on two structures in the honey bee (the sting gland and digestive tract) both contained within one larger structure, the whole abdomen. For each of the three structures, we used RNA-seq to identify differentially expressed genes between two developmental stages, nurse bees and foragers. Based on RNA-seq for each structure-specific extraction, we found that RNA-seq with composite structures leads to many false negatives (genes strongly differentially expressed in particular structures which are not found to be differentially expressed within the composite structure). We also found a significant number of genes with one pattern of differential expression in the tissue-specific extraction, and the opposite in the composite extraction, suggesting multiple signals from such genes within the composite structure. We found these patterns for different classes of genes including transcription factors. Conclusions: Many RNA-seq studies currently use composite extractions, and even whole insect extractions, when tissue and structure specific extractions are possible. This is due to the logistical difficultly of micro-dissection and unawareness of the potential errors associated with composite extractions. The present study suggests that RNA-seq studies of composite structures are prone to false negatives and difficult to interpret positive signals for genes with variable patterns of local expression. In general, our results suggest that RNA-seq on large composite structures should be avoided unless it is possible to demonstrate that the effects shown here do not exist for the genes of interest.
    Electronic ISSN: 1471-2164
    Topics: Biology
    Published by BioMed Central
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