Description: The hydrothermal mats, mounds, and chimneys of the southern Guaymas Basin are the surface expression of complex subsurface hydrothermal circulation patterns. In this overview, we document the most frequently visited features of this hydrothermal area with photographs, temperature measurements, and selected geochemical data; many of these distinct habitats await characterization of their microbial communities and activities. Microprofiler deployments on microbial mats and hydrothermal sediments show their steep geochemical and thermal gradients at millimeter-scale vertical resolution. Mapping these hydrothermal features and sampling locations within the southern Guaymas Basin suggest linkages to underlying shallow sills and heat flow gradients. Recognizing the inherent spatial limitations of much current Guaymas Basin sampling calls for comprehensive surveys of the wider spreading region.

Description: To investigate diel calcium carbonate (CaCO3) dynamics in permeable coral reef sands, we measured pore-water profiles and fluxes of oxygen (O2), nutrients, pH, calcium (Ca2+), and alkalinity (TA) across the sediment-water interface in sands of different permeability at Heron Reef, Australia. Background flushing rates were high, most likely as a result of infaunal burrow irrigation, but flux chamber stirring enhanced pore-water exchange. Light and pore-water advection fueled high rates of benthic primary production and calcification in sunlit surface sediments. In the light, benthic photosynthesis and calcification induced surface minima in Ca2+ and TA and peaks in pH and O2. Oxygen penetration depth in coarse sands decreased from ∼ 1.2 cm during the day to ∼ 0.6 cm at night. Total oxygen uptake (TOU) in dark chambers was three to fourteen times greater than diffusive uptake and showed a direct effect of pore-water advection. Greater sediment oxygen consumption rates were observed in higher permeability sands. In the dark, TA release was not stimulated by increasing TOU because of a damping effect of pore-water advection on metabolic CaCO3 dissolution efficiency. On a daily basis, CaCO3 undergoes net dissolution in Heron Reef sands. However, pore-water advection can reverse the CaCO3 budget and promote CaCO3 preservation under the most energetic conditions.

Description: In coral reefs, sediments play a crucial role in element cycling by contributing to primary production and the remineralization of organic matter. We studied how future ocean acidification (OA) will affect biotic and abiotic processes in sediments from two coral reefs of the Great Barrier Reef, Australia. This was investigated in the laboratory under conditions where water-sediment exchange was dominated by molecular diffusion (Magnetic Island) or by porewater advection (Davies Reef). OA conditions (+ΔpCO2: 170–900 μatm, −ΔpH: 0.1–0.4) did not affect photosynthesis, aerobic and anaerobic organic matter remineralization, and growth of microphytobenthos. However, microsensor measurements showed that OA conditions reduced the porewater pH. Under diffusive conditions these changes were limited to the upper sediment layers. In contrast, advective conditions caused a deeper penetration of low pH water into the sediment resulting in an earlier pH buffering by dissolution of calcium carbonate (CaCO3). This increased the dissolution of Davis Reef sediments turning them from net precipitating (−0.8 g CaCO3 m−2 d−1) under ambient to net dissolving (1 g CaCO3 m−2 d−1) under OA conditions. Comparisons with in-situ studies on other reef sediments show that our dissolution rates are reasonable estimates for field settings. We estimate that enhanced dissolution due to OA will only have a minor effect on net ecosystem calcification of the Davies Reef flat (〈4%). However, it could decrease recent sediment accumulation rates in the lagoon by up to 31% (by 0.2–0.4 mm year−1), reducing valuable reef space. Furthermore, our results indicate that high-magnesium calcite is predominantly dissolving in the studied sediments and a drastic reduction in this mineral can be expected on Davis Reef lagoon in the near future, leaving sediments of an altered mineral composition. This study demonstrates that biotic sediment processes will likely not directly be affected by OA. Ensuing indirect effects of OA-induced sediment dissolution on biotic processes are discussed.

Description: N2-fixing cyanobacteria mediate H2 fluxes through the opposing processes of H2 evolution, which is a by-product of the N2 fixation reaction, and H2 uptake, which is driven by uptake hydrogenases. Here, we used microelectrodes to characterize H2 and O2 dynamics in single natural colonies of the globally important N2 fixer Trichodesmium collected from the Gulf of Eilat. We observed gradually changing H2 dynamics over the course of the day, including both net H2 evolution and net H2 uptake, as well as large differences in H2 fluxes between individual colonies. Net H2 uptake was observed in colonies amended with H2 in both light and dark. Net H2 evolution was recorded in the light only, reflecting light-dependent N2 fixation coupled to H2 evolution. Both net H2 evolution and H2 uptake rates were higher before 2 pm than later in the day. These pronounced H2 dynamics in the morning coincided with strong net O2 uptake and the previously reported diel peak in N2 fixation. Later in the afternoon, when photosynthesis rates determined by O2 measurements were highest, and N2 fixation rates decrease according to previous studies, the H2 dynamics were also less pronounced. Thus, the observed diel variations in H2 dynamics reflect diel changes in the rates of O2 consumption and N2 fixation. Remarkably, the presence of H2 strongly stimulated the uptake of mineral iron by natural colonies. The magnitude of this effect was dependent on the time of day, with the strongest response in incubations that started before 2 pm, i.e., the period that covered the time of highest uptake hydrogenase activity. Based on these findings, we propose that by providing an electron source for mineral iron reduction in N2-fixing cells, H2 may contribute to iron uptake in Trichodesmium colonies.

Description: Corals are globally important calcifiers that exhibit complex responses to anthropogenic warming and acidification. Although coral calcification is supported by high seawater pH, photosynthesis by the algal symbionts of zooxanthellate corals can be promoted by elevated pCO2. To investigate the mechanisms underlying corals’ complex responses to global change, three species of tropical zooxanthellate corals (Stylophora pistillata, Pocillopora damicornis, and Seriatopora hystrix) and one species of asymbiotic cold-water coral (Desmophyllum pertusum, syn. Lophelia pertusa) were cultured under a range of ocean acidification and warming scenarios. Under control temperatures, all tropical species exhibited increased calcification rates in response to increasing pCO2. However, the tropical species’ response to increasing pCO2 flattened when they lost symbionts (i.e., bleached) under the high-temperature treatments—suggesting that the loss of symbionts neutralized the benefit of increased pCO2 on calcification rate. Notably, the cold-water species that lacks symbionts exhibited a negative calcification response to increasing pCO2, although this negative response was partially ameliorated under elevated temperature. All four species elevated their calcifying fluid pH relative to seawater pH under all pCO2 treatments, and the magnitude of this offset (Δ[H+]) increased with increasing pCO2. Furthermore, calcifying fluid pH decreased along with symbiont abundance under thermal stress for the one species in which calcifying fluid pH was measured under both temperature treatments. This observation suggests a mechanistic link between photosymbiont loss (‘bleaching’) and impairment of zooxanthellate corals’ ability to elevate calcifying fluid pH in support of calcification under heat stress. This study supports the assertion that thermally induced loss of photosymbionts impairs tropical zooxanthellate corals’ ability to cope with CO2-induced ocean acidification.