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GEOMAR Library Ocean Research Information Access

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  • PANGAEA  (50)
  • Nature Publishing Group  (1)
  • 2010-2014  (51)
  • 2000-2004
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  • 1
    Publication Date: 2019-09-23
    Description: Sediment-hosting hydrothermal systems in the Okinawa Trough maintain a large amount of liquid, supercritical and hydrate phases of CO2 in the seabed. The emission of CO2 may critically impact the geochemical, geophysical and ecological characteristics of the deep-sea sedimentary environment. So far it remains unclear whether microbial communities that have been detected in such high-CO2 and low-pH habitats are metabolically active, and if so, what the biogeochemical and ecological consequences for the environment are. In this study, RNA-based molecular approaches and radioactive tracer-based respiration rate assays were combined to study the density, diversity and metabolic activity of microbial communities in CO2-seep sediment at the Yonaguni Knoll IV hydrothermal field of the southern Okinawa Trough. In general, the number of microbes decreased sharply with increasing sediment depth and CO2 concentration. Phylogenetic analyses of community structure using reverse-transcribed 16S ribosomal RNA showed that the active microbial community became less diverse with increasing sediment depth and CO2 concentration, indicating that microbial activity and community structure are sensitive to CO2 venting. Analyses of RNA-based pyrosequences and catalyzed reporter deposition-fluorescence in situ hybridization data revealed that members of the SEEP-SRB2 group within the Deltaproteobacteria and anaerobic methanotrophic archaea (ANME-2a and -2c) were confined to the top seafloor, and active archaea were not detected in deeper sediments (13–30 cm in depth) characterized by high CO2. Measurement of the potential sulfate reduction rate at pH conditions of 3–9 with and without methane in the headspace indicated that acidophilic sulfate reduction possibly occurs in the presence of methane, even at very low pH of 3. These results suggest that some members of the anaerobic methanotrophs and sulfate reducers can adapt to the CO2-seep sedimentary environment; however, CO2 and pH in the deep-sea sediment were found to severely impact the activity and structure of the microbial community.
    Type: Article , PeerReviewed
    Format: text
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  • 2
    Publication Date: 2015-05-11
    Repository Name: EPIC Alfred Wegener Institut
    Type: PANGAEA Documentation , notRev
    Format: application/zip
    Format: application/zip
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  • 3
    Publication Date: 2023-02-24
    Description: The SUGAR Toolbox contains scripts coded in MATLAB for calculating various thermodynamic, kinetic, and geologic properties of substances occurring in the marine environment, particularly gas hydrate and seep systems. Brief descriptions of the toolbox scripts and some notes on the underlying basic theory as well as tables of additional property values can be found in the accompanying documentation.
    Keywords: GEOMAR; Helmholtz Centre for Ocean Research Kiel
    Type: Dataset
    Format: application/zip, 3.4 MBytes
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  • 4
    Publication Date: 2024-04-18
    Keywords: Alkalinity, total; Ammonium; Barium; Boron; Bromide; Calcium; Chloride; DEPTH, sediment/rock; GC; GC9; Gravity corer; Gulf of Cádiz, Atlantic Ocean; Hydrogen sulfide; Inductively coupled plasma atomic emission spectroscope (ICP-AES); Iodide; Ion chromatography; Iron; Lithium; Magnesium; Manganese; Maria S. Merian; MSM01/3; MSM01/3_174; Phosphate; Photometry; Potassium; Replicate; Sample code/label; Silicate; Silicon; Sodium; Strontium; Strontium-87/Strontium-86 ratio; Sulfate; Titration, Pavlova; δ18O; δ37Cl; δ7Li; δ Deuterium
    Type: Dataset
    Format: text/tab-separated-values, 318 data points
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  • 5
    Publication Date: 2024-04-18
    Keywords: Alkalinity, total; Ammonium; Barium; Boron; Bromide; Calcium; Chloride; DEPTH, sediment/rock; GC; GC23; Gravity corer; Gulf of Cádiz, Atlantic Ocean; Hydrogen sulfide; Inductively coupled plasma atomic emission spectroscope (ICP-AES); Iodide; Ion chromatography; Iron; Lithium; Magnesium; Manganese; Maria S. Merian; MSM01/3; MSM01/3_252; Photometry; Potassium; Replicate; Sample code/label; Silicon; Sodium; Strontium; Sulfate; Titration, Pavlova
    Type: Dataset
    Format: text/tab-separated-values, 180 data points
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  • 6
    Publication Date: 2024-04-18
    Keywords: Alkalinity, total; Ammonium; Barium; Boron; Bromide; Calcium; Chloride; DEPTH, sediment/rock; GC; GC29; Gravity corer; Gulf of Cádiz, Atlantic Ocean; Hydrogen sulfide; Inductively coupled plasma atomic emission spectroscope (ICP-AES); Iodide; Ion chromatography; Iron; Lithium; Magnesium; Manganese; Maria S. Merian; MSM01/3; MSM01/3_265; Photometry; Potassium; Replicate; Sample code/label; Silicate; Silicon; Sodium; Strontium; Sulfate; Titration, Pavlova; δ18O; δ Deuterium
    Type: Dataset
    Format: text/tab-separated-values, 145 data points
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  • 7
    Publication Date: 2024-04-18
    Keywords: Alkalinity, total; Ammonium; Barium; Boron; Bromide; Calcium; Chloride; DEPTH, sediment/rock; Gulf of Cádiz, Atlantic Ocean; Hydrogen sulfide; Inductively coupled plasma atomic emission spectroscope (ICP-AES); Iodide; Ion chromatography; Iron; Lithium; Magnesium; Manganese; Maria S. Merian; MSM01/3; MSM01/3_161; MUC; MUC4; MultiCorer; Phosphate; Photometry; Potassium; Replicate; Sample code/label; Silicate; Silicon; Sodium; Strontium; Sulfate; Titration, Pavlova; δ18O; δ Deuterium
    Type: Dataset
    Format: text/tab-separated-values, 309 data points
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  • 8
    Publication Date: 2024-04-18
    Keywords: Alkalinity, total; Ammonium; Boron; Bromide; Calcium; Chloride; DEPTH, sediment/rock; FLUFO; Fluid flux observatory; Gulf of Cádiz, Atlantic Ocean; Hydrogen sulfide; Inductively coupled plasma atomic emission spectroscope (ICP-AES); Iodide; Ion chromatography; Iron; Lithium; Magnesium; Manganese; Maria S. Merian; MSM01/3; MSM01/3_170; Nitrate; Phosphate; Photometry; Potassium; Replicate; Silicate; Silicon; Strontium; Sulfate; Titration, Pavlova
    Type: Dataset
    Format: text/tab-separated-values, 280 data points
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  • 9
    Publication Date: 2024-04-18
    Keywords: Alkalinity, total; Barium; Boron; Bromide; Calcium; Chloride; DEPTH, sediment/rock; GC; GC11; Gravity corer; Gulf of Cádiz, Atlantic Ocean; Hydrogen sulfide; Inductively coupled plasma atomic emission spectroscope (ICP-AES); Iodide; Ion chromatography; Iron; Lithium; Magnesium; Manganese; Maria S. Merian; MSM01/3; MSM01/3_191; Photometry; Potassium; Replicate; Sample code/label; Silicon; Sodium; Strontium; Sulfate; Titration, Pavlova
    Type: Dataset
    Format: text/tab-separated-values, 120 data points
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  • 10
    Publication Date: 2024-04-18
    Keywords: Alkalinity, total; Ammonium; Barium; Boron; Bromide; Calcium; Chloride; DEPTH, sediment/rock; GC; GC15; Gravity corer; Gulf of Cádiz, Atlantic Ocean; Hydrogen sulfide; Inductively coupled plasma atomic emission spectroscope (ICP-AES); Iodide; Ion chromatography; Lithium; Magnesium; Manganese; Maria S. Merian; MSM01/3; MSM01/3_215; Phosphate; Photometry; Potassium; Replicate; Sample code/label; Silicate; Silicon; Sodium; Strontium; Sulfate; Titration, Pavlova
    Type: Dataset
    Format: text/tab-separated-values, 126 data points
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