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  • PANGAEA  (5)
  • The American Society for Pharmacology and Experimental Therapeutics (ASPET)  (3)
  • 2015-2019  (8)
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  • 1
    Publication Date: 2015-06-21
    Description: Spider venoms are a rich source of ion channel modulators with therapeutic potential. Given the analgesic potential of subtype-selective inhibitors of voltage-gated sodium (Na V ) channels, we screened spider venoms for inhibitors of human Na V 1.7 (hNa V 1.7) using a high-throughput fluorescent assay. Here, we describe the discovery of a novel Na V 1.7 inhibitor, μ -TRTX-Tp1a (Tp1a), isolated from the venom of the Peruvian green-velvet tarantula Thrixopelma pruriens . Recombinant and synthetic forms of this 33-residue peptide preferentially inhibited hNa V 1.7 〉 hNa V 1.6 〉 hNa V 1.2 〉 hNa V 1.1 〉 hNa V 1.3 channels in fluorescent assays. Na V 1.7 inhibition was diminished (IC 50 11.5 nM) and the association rate decreased for the C-terminal acid form of Tp1a compared with the native amidated form (IC 50 2.1 nM), suggesting that the peptide C terminus contributes to its interaction with hNa V 1.7. Tp1a had no effect on human voltage-gated calcium channels or nicotinic acetylcholine receptors at 5 μ M. Unlike most spider toxins that modulate Na V channels, Tp1a inhibited hNa V 1.7 without significantly altering the voltage dependence of activation or inactivation. Tp1a proved to be analgesic by reversing spontaneous pain induced in mice by intraplantar injection in OD1, a scorpion toxin that potentiates hNa V 1.7. The structure of Tp1a as determined using NMR spectroscopy revealed a classic inhibitor cystine knot (ICK) motif. The molecular surface of Tp1a presents a hydrophobic patch surrounded by positively charged residues, with subtle differences from other ICK spider toxins that might contribute to its different pharmacological profile. Tp1a may help guide the development of more selective and potent hNa V 1.7 inhibitors for treatment of chronic pain.
    Print ISSN: 0026-895X
    Electronic ISSN: 1521-0111
    Topics: Chemistry and Pharmacology , Medicine
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  • 2
    Publication Date: 2015-05-01
    Description: The WNT/ β -catenin signaling pathway has been identified as an important endogenous regulator of hepatic cytochrome P450 (P450) expression in mouse liver. In particular, it is involved in the regulation of P450 expression in response to exposure to xenobiotic agonists of the nuclear receptors constitutive androstane receptor (CAR), aryl hydrocarbon receptor (AhR), and Nrf2. To systematically elucidate the effect of the WNT/ β -catenin pathway on the regulation and inducibility of major human P450 enzymes, HepaRG cells were treated with either the WNT/ β -catenin signaling pathway agonist, WNT3a, or with small interfering RNA directed against β -catenin, alone or in combination with a panel of activating ligands for AhR [2,3,7,8-tetrachlorodibenzo- p -dioxin (TCDD)], CAR [6-(4-chlorophenyl)imidazo[2,1- b ][1,3]thiazole-5-carbaldehyde- O -(3,4-dichlorobenzyl)oxime (CITCO)], pregnane X receptor (PXR) [rifampicin], and peroxisome proliferator–activated receptor (PPAR) α [4-chloro-6-(2,3-xylidino)-2-pyrimidinylthioacetic acid (WY14,643)]. Assessment of P450 gene expression and enzymatic activity after downregulation or activation of the WNT/ β -catenin pathway revealed a requirement of β -catenin in the AhR-, CAR-, and PXR-mediated induction of CYP1A, CYP2B6 and CYP3A4 (for CAR and PXR), and CYP2C8 (for PXR) gene expression. By contrast, activation of the WNT/ β -catenin pathway prevented PPAR α -mediated induction of CYP1A, CYP2C8, CYP3A4, and CYP4A11 genes, suggesting a dominant-negative role of β -catenin in PPAR α -mediated regulation of these genes. Our data indicate a significant effect of the WNT/ β -catenin pathway on the regulation of P450 enzymes in human hepatocytes and reveal a novel crosstalk between β -catenin and PPAR α signaling pathways in the regulation of P450 expression.
    Print ISSN: 0026-895X
    Electronic ISSN: 1521-0111
    Topics: Chemistry and Pharmacology , Medicine
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  • 3
    Publication Date: 2015-10-14
    Description: Enzymatic conversion of most xenobiotic compounds is accomplished by hepatocytes in the liver, which are also an important target for the manifestation of the toxic effects of foreign compounds. Most cell lines derived from hepatocytes lack important toxifying or detoxifying enzymes or are defective in signaling pathways that regulate expression and activity of these enzymes. On the other hand, the use of primary human hepatocytes is complicated by scarce availability of cells and high interdonor variability. Thus, analyses of drug metabolism and hepatotoxicity in vitro are a difficult task. The cell line HC-AFW1 was isolated from a pediatric hepatocellular carcinoma and so far has been used for tumorigenicity and chemotherapy resistance studies. Here, a comprehensive characterization of xenobiotic metabolism in HC-AFW1 cells is presented along with studies on the functionality of the most important transcriptional regulators of drug-metabolizing enzymes. Results from HC-AFW1 cells were compared with commercially available HepaRG cells and cultured primary human hepatocytes. Data show that the nuclear receptors and xenosensors AHR (aryl hydrocarbon receptor), CAR (constitutive androstane receptor), PXR (pregnane-X-receptor), NRF2 [nuclear factor (erythroid-derived 2)–like 2], and PPAR α (peroxisome proliferator–activated receptor α ) are functional in HC-AFW1 cells, comparable to HepaRG and primary cells. HC-AFW1 cells possess considerable activities of different cytochrome P450 enzymes, which, however, are lower than corresponding enzyme activities in HepaRG cells or primary hepatocytes. In summary, HC-AFW1 are a new promising tool for studying the mechanisms of the regulation of drug metabolism in human liver cells in vitro.
    Print ISSN: 0090-9556
    Electronic ISSN: 1521-009X
    Topics: Chemistry and Pharmacology , Medicine
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  • 4
    Publication Date: 2015-07-01
    Repository Name: EPIC Alfred Wegener Institut
    Type: PANGAEA Documentation , notRev
    Format: application/pdf
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  • 5
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    PANGAEA
    In:  Supplement to: Tierney, Jessica E; Malevich, Steven Brewster; Gray, William; Vetter, Leal; Thirumalai, Kaustubh (2019): Bayesian calibration of the Mg/Ca paleothermometer in planktic foraminifera. EarthArXiv, https://doi.org/10.31223/osf.io/y3xdg
    Publication Date: 2023-01-30
    Description: This dataset contains a modern core top collection of Mg/Ca in planktic foraminifera; the same dataset averaged to 1 x 1 grids; a collection of Mg/Ca in culture experiments with planktic foraminifera; a collection of Mg/Ca and Mg/Ca of seawater in culture experiments with planktic and benthic foraminifera; and a collection of geological estimates of the Mg/Ca of seawater.
    Keywords: File content; File format; File name; File size; Mg/Ca; Mg/Ca seawater; planktic foraminifera; Uniform resource locator/link to file
    Type: Dataset
    Format: text/tab-separated-values, 25 data points
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  • 6
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    PANGAEA
    In:  Supplement to: Escher-Vetter, Heidi (2015): 400 Jahre Feldforschung am Vernagtferner (Ötztal, Österreich) (400 years of field research on Vernagtferner (Oetztal Alps, Austria)). In: Lozán, José L.; Grassl, Hartmut; Kasang, Dieter; Notz, Dirk & Escher-Vetter, Heidi (Hrsg.): Wissenschaftliche Auswertungen. Warnsignal Klima: Das Eis der Erde, 146-154, https://doi.org/10.2312/warnsignal.klima.eis-der-erde.22
    Publication Date: 2023-01-30
    Description: In this article, methods and results are presented for the analysis of the behaviour of an alpine glacier, the Vernagtferner, Oetztal Alps, Austria. Since 1601, the advances and retreats of Vernagtferner are documented and analysed with rising temporal and spa- tial precision. Early pictorial documents (from 1601 to 1844), high-resolution maps since 1889, mass balance investigations with the glaciological method since 1964 and meteorological-hydrological records and models since 1974 deliver, with increasing temporal resolution, a consistent pattern of the continual ice loss of this glacier over more than 30 years.
    Keywords: Area; Calculated; DATE/TIME; GLAC; Glacier mass; Glaciers Austria; Mass change; Sampling/measurements on glacier; Total area; Vernagtferner; Vernagtferner, Ötztaler Alpen, Austria
    Type: Dataset
    Format: text/tab-separated-values, 56 data points
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  • 7
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    PANGAEA
    In:  Supplement to: Shervais, John W; Reagan, Mark; Haugen, Emily; Almeev, Renat; Pearce, Julian; Prytulak, Julie; Ryan, Jeffrey G; Whattam, Scott Andrew; Godard, Marguerite; Chapman, Timothy; Li, Hongyan; Kurz, Walter; Nelson, Wendy R; Heaton, Daniel; Kirchenbaur, Maria; Shimizu, Kenji; Sakuyama, Tetsuya; Li, Yibing; Vetter, Scott K (2018): Magmatic Response to Subduction Initiation, Part I: Forearc basalts of the Izu-Bonin Arc from IODP Expedition 352. Geochemistry, Geophysics, Geosystems, 19, https://doi.org/10.1029/2018GC007731
    Publication Date: 2023-07-10
    Description: These basalts represent the earliest response to subduction initiation in the Izu-Bonin arc system during the early Eocene. They are highly refractory and formed by high degrees of partial melting of a previously depleted source.
    Keywords: 352-U1440A; 352-U1440B; 352-U1441A; Aluminium oxide; Barium; Calcium oxide; Calculated from weight loss after ignition at 450 °C; CDRILL; Cerium; Chromium; Cobalt; Core drilling; DEPTH, sediment/rock; Dysprosium; Erbium; Europium; Event label; Event layer type; EXP352; Gadolinium; Hafnium; Holmium; IBM; ICP-MS; Integrated Ocean Drilling Program / International Ocean Discovery Program; IODP; Iron oxide, Fe2O3; Iron oxide, FeO; Izu-Bonin-Mariana fore arc; Joides Resolution; Lanthanum; Lead; Loss on ignition; Lutetium; Magnesium oxide; Manganese oxide; Mass; Neodymium; Nickel; Niobium; Phosphorus pentoxide; Potassium; Potassium oxide; Praseodymium; Rubidium; Samarium; Sample code/label; Sample ID; Scandium; Silicon dioxide; Sodium oxide; Strontium; Sum; Tantalum; Terbium; Thorium; Thulium; Titanium; Titanium dioxide; Unit; Uranium; Vanadium; X-ray fluorescence (XRF); Ytterbium; Yttrium; Zirconium
    Type: Dataset
    Format: text/tab-separated-values, 3494 data points
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  • 8
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    PANGAEA
    In:  Supplement to: Strasser, Ulrich; Marke, Thomas; Braun, Ludwig N; Escher-Vetter, Heidi; Juen, Irmgard; Kuhn, Michael; Maussion, Fabien; Mayer, Christoph; Nicholson, Lindsey; Niedertscheider, Klaus; Sailer, Rudolf; Stötter, Johann; Weber, Markus; Kaser, Georg (2017): The Rofental: a high Alpine research basin (1890 m - 3770 m a.s.l.) in the Ötztal Alps (Austria) with over 150 years of hydro-meteorological and glaciological observations. Special Issue: Hydrometeorological data from mountain and alpine research catchments; 04 Aug 2015-30 Sep 2017; Guest editors: J. Pomeroy and D. Marks, Earth System Science Data Discussions, 27 pp, https://doi.org/10.5194/essd-2017-85
    Publication Date: 2024-03-23
    Description: A comprehensive hydrometeorological and glaciological data set is presented, originating from a multitude of recordings at several intensively operated research sites in the Rofental (1891 - 3772 m a.s.l., Ötztal Alps, Austria). The data sets are spanning a period of 150 years and hence represent a unique, worldwide unprecedented pool of high mountain observations. Their collection has originally been initiated to support the scientific investigation of the glaciers Hintereis-, Kesselwand- and Vernagtferner. Later, additional measurements of meteorological and hydrological variables have been undertaken; data now comprise records of temperature, relative humidity, short- and longwave radiation, wind speed and direction, air pressure, precipitation and water levels. For the glaciers, annual mass balance, glacier front variation and flow velocities as well as photographic images of the glacier status have been recorded. Since 2001, a series of distributed (airborne and terrestrial) laserscans has been processed. Most recently, a permanent terrestrial laser scanner installed on 'Im hintern Eis' (3244 m a.s.l.) enables to continuously observe almost the entire area of Hintereisferner. The data and research undertaken at the sites of investigation enable combined research of atmospheric, cryospheric and hydrological processes in complex terrain, and support the development of several state-of-the art hydroclimatological and glacier mass balance models. The institutions taking part in the Rofental research framework have joined to a cooperation consortium and promote their site in several international research initiatives. In the framework of INARCH, all original research data sets are now provided to the scientific community according to the Creative Commons Attribution License by means of the PANGAEA repository.
    Type: Dataset
    Format: application/zip, 22 datasets
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