Description: The pelagic ecosystem of the Arctic Ocean is threatened by severe changes such as the reduction in sea‐ice coverage and increased inflow of warmer Atlantic water. The latter is already altering the zooplankton community, highlighting the need for monitoring studies. It is therefore essential to accelerate the taxonomic identification to speed up sample analysis, and to expand the analysis to biomass and size assessments, providing data for modeling efforts. Our case study in Fram Strait illustrates that image‐based analyses with the ZooScan provide abundance data and taxonomic resolutions that are comparable to microscopic analyses and are suitable for zooplankton monitoring purposes in the Arctic. We also show that image analysis allows to differentiate developmental stages of the key species Calanus spp. and Metridia longa and, thus, to study their population dynamics. Our results emphasize that older preserved samples can be successfully reanalyzed with ZooScan. To explore the applicability of image parameters for calculating total mesozooplankton and Calanus spp. biomasses, we used (1) conversion factors (CFs) translating wet mass to dry mass (DM), and (2) length–mass (LM) relationships. For Calanus spp., the calculated biomass values yielded similar results as direct DM measurements. Total mesozooplankton biomass ranged between 1.6 and 15 (LM) or 2.4 and 21 (CF) g DM m², respectively, which corresponds to previous studies in Fram Strait. Ultimately, a normalized biomass size spectra analysis provides 1st insights into the mesozooplankton size structure at different depths, revealing steep slopes in the linear fit in communities influenced by Atlantic water inflow.

Description: Bundesministerium für Bildung und Forschung http://dx.doi.org/10.13039/501100002347

Description: Aim Biodiversity dynamics comprise evolutionary and ecological changes on multiple temporal scales from millions of years to decades, but they are often interpreted within a single time frame. Planktonic foraminifera communities offer a unique opportunity for analysing the dynamics of marine biodiversity over different temporal scales. Our study aims to provide a baseline for assessments of biodiversity patterns over multiple time-scales, which is urgently needed to interpret biodiversity responses to increasing anthropogenic pressure. Location Global (26 sites). Time period Five time-scales: multi-million-year (0-7 Myr), million-year (0-0.5 Myr), multi-millennial (0-15 thousand years), millennial (0-1,100 years) and decadal (0-32 years). Major taxa studied Planktonic foraminifera. Methods We analysed community composition of planktonic foraminifera at five time-scales, combining measures of standing diversity (richness and effective number of species, ENS) with measures of temporal community turnover (presence-absence-based, dominance-based). Observed biodiversity patterns were compared with the outcome of a neutral model to separate the effects of sampling resolution (the highest in the shortest time series) from biological responses. Results Richness and ENS decreased from multi-million-year to millennial time-scales, but higher standing diversity was observed on the decadal scale. As predicted by the neutral model, turnover in species identity and dominance was strongest at the multi-million-year time-scale and decreased towards the millennial scale. However, contrary to the model predictions, modern time series show rapid decadal variation in the dominance structure of foraminifera communities, which is of comparable magnitude as over much longer time periods. Community turnover was significantly correlated with global temperature change, but not on the shortest time-scale. Main conclusions Biodiversity patterns can be to some degree predicted from the scaling effects related to different durations of time series, but changes in the dominance structure observed over the last few decades reach higher magnitude, probably forced by anthropogenic effects, than those observed over much longer durations.

Description: Climate variability and changes in sea ice dynamics have caused several ice-obligate or krill-dependent populations of marine predators to decline, eliciting concern about their demographic persistence and the indirect ecological consequences that predator depletions may have on marine ecosystems. Pack-ice seals are dominant ice-obligate predators in the Antarctic marine ecosystem, but there is considerable uncertainty about their abundance and population trends. We modelled the density and distribution of pack-ice seals as a function of environmental covariates in the southern Weddell Sea, Antarctica. Our density surface modelling approach used data from aerial surveys of pack-ice seals collected in the 2013/14 austral summer. Crabeater seals Lobo don carcinophaga, the most numerous pack-ice seal we observed, occurred at the highest densities in areas with extensive sea ice near the continental shelf break, but were almost absent in areas of similar sea ice concentration in the southern extent of the Weddell Sea. The highest densities of Weddell seals Leptonychotes weddelli, which were less abundant than crabeater seals within the pack-ice habitat, were predicted to occur over the continental shelf, near the shelf break. The distribution of both seal species broadly corresponded with the distribution and relative abundance of their main prey (Antarctic krill Euphausia superba and Antarctic silverfish Pleuragramma antarctica) obtained from concurrent ecosystem surveys. Ross seals Ommatophoca rossii and leopard seals Hydrurga leptonyx were not detected at all and are apparently rare within the southern Weddell Sea. These results can contribute to biodiversity assessments in the context of marine protected area planning in this region of the Southern Ocean.

Description: Submesoscale structures, characterized by intense vertical and horizontal velocities, potentially play a crucial role in oceanographic dynamics and pelagic fluxes. Due to their small spatial scale and short temporal persistence, conditions for in situ measurements are challenging and thus the role of such structures for zooplankton distribution is still unclear. During RV Polarstern expedition PS107 to Arctic Fram Strait in July/August 2017, a submesoscale filament was detected, which initiated an ad hoc oceanographic and biological sampling campaign. To determine zooplankton taxonomic composition, horizontal and vertical distribution, abundance and biomass, vertical MultiNet hauls (depth intervals: 300–200–100–50–10–0 m) were taken at four stations across the filament. Zooplankton data were evaluated in context with the physical-oceanographic observations of the filament to assess submesoscale physical-biological interactions. Our data show that submesoscale features considerably impact zooplankton dynamics. While structuring the pelagial with distinct zooplankton communities in a vertical as well as horizontal dimension, they accumulate abundance and biomass of epipelagic species at the site of convergence. Further, high-velocity jets associated with such dynamics are possibly of major importance for species allocation and biological connectivity, accelerating for instance processes such as the ‘Atlantification’ of the Arctic. Thus, submesoscale features affect the surrounding ecosystem in multiple ways with consequences for higher trophic levels and biogeochemical cycles.

Description: The pelagic ecosystem of the Arctic Ocean is threatened by severe changes such as the reduction in sea-ice coverage and increased inflow of warmer Atlantic water. The latter is already altering the zooplankton community, highlighting the need for monitoring studies. It is therefore essential to accelerate the taxonomic identification to speed up sample analysis, and to expand the analysis to biomass and size assessments, providing data for modeling efforts. Our case study in Fram Strait illustrates that image-based analyses with the ZooScan provide abundance data and taxonomic resolutions that are comparable to microscopic analyses and are suitable for zooplankton monitoring purposes in the Arctic. We also show that image analysis allows to differentiate developmental stages of the key species Calanus spp. and Metridia longa and, thus, to study their population dynamics. Our results emphasize that older preserved samples can be successfully reanalyzed with ZooScan. To explore the applicability of image parameters for calculating total mesozooplankton and Calanus spp. biomasses, we used (1) conversion factors (CFs) translating wet mass to dry mass (DM), and (2) length–mass (LM) relationships. For Calanus spp., the calculated biomass values yielded similar results as direct DM measurements. Total mesozooplankton biomass ranged between 1.6 and 15 (LM) or 2.4 and 21 (CF) g DM m−2, respectively, which corresponds to previous studies in Fram Strait. Ultimately, a normalized biomass size spectra analysis provides 1st insights into the mesozooplankton size structure at different depths, revealing steep slopes in the linear fit in communities influenced by Atlantic water inflow.

Description: The Arctic Ocean is rapidly changing. Air temperature is rising two to four times faster in the Arctic than the global average, with dramatic consequences for the ecosystems. Polar zooplankton species have to cope with those increasing temperatures, whilst simultaneously facing increasing competition by boreal-Atlantic sister species advected into the Arctic Ocean via a stronger Atlantic inflow. To assess the sensitivity of Arctic and Atlantic zooplankton to rising temperatures, respiration rates of dominant Arctic species (Calanus hyperboreus, Calanus glacialis, Paraeuchaeta glacialis, Themisto libellula) and their co-occurring Atlantic congeners (Calanus finmarchicus, Paraeuchaeta norvegica, Themisto abyssorum) were measured at ambient temperatures and simulated conditions of ocean warming from 0 to 10°C during three expeditions with RV Polarstern to the Arctic Fram Strait. Arctic zooplankton showed only slowly increasing respiration rates with increasing temperatures, also indicated by low Q10 ratios. In contrast, boreal-Atlantic representatives responded to higher temperatures by a rapid and steeper increase in their respiration rates (higher Q10), suggesting higher metabolic activity. These results imply that Arctic species are physiologically more tolerant to ocean warming than expected but might be outcompeted by their Atlantic congeners beyond a certain temperature threshold in areas of strong distribution overlap. Thus, the ‘Atlantification’ of the Arctic zooplankton community seems to be driven rather by ecological interactions than by physiological limitations. Changes in zooplankton community composition and biodiversity will have major consequences for trophodynamics and energy flux in Arctic ecosystems, since polar species tend to be larger than their southern counterparts and have a higher lipid content, providing more energy-rich food for higher trophic levels.

Description: 〈jats:p〉Consumer regulation of lipid composition during assimilation of dietary items is related to their ecology, habitat, and life cycle, and may lead to extra energetic costs associated with the conversion of dietary material into the fatty acids (FAs) necessary to meet metabolic requirements. For example, lipid-rich copepods from temperate and polar latitudes must convert assimilated dietary FAs into wax esters, an efficient type of energy storage which enables them to cope with seasonal food shortages and buoyancy requirements. Lipid-poor copepods, however, tend to not be as constrained by food availability as their lipid-rich counterparts and, thus, should have no need for modifying dietary FAs. Our objective was to test the assumption that 〈jats:italic〉Temora longicornis〈/jats:italic〉, a proxy species for lipid-poor copepods, does not regulate its lipid composition. Isotopically-enriched (〈jats:sup〉13〈/jats:sup〉C) diatoms were fed to copepods during a 5-day laboratory experiment. Compound-specific stable isotope analysis of algae and copepod samples was performed in order to calculate dietary FA assimilation, turnover, and assimilation efficiency into copepod FAs. Approximately 65% of the total dietary lipid carbon (C) assimilated (913 ± 68 ng C ind〈jats:sup〉-1〈/jats:sup〉 at the end of the experiment) was recorded as polyunsaturated FAs, with 20 and 15% recorded as saturated and monounsaturated FAs, respectively. As expected, 〈jats:italic〉T. longicornis〈/jats:italic〉 assimilated dietary FAs in an unregulated, non-homeostatic manner, as evidenced by the changes in its FA profile, which became more similar to that of their diet. Copepods assimilated 11% of the total dietary C (or 40% of the dietary lipid C) ingested in the first two days of the experiment. In addition, 34% of their somatic growth (in C) after two days was due to the assimilation of dietary C in FAs. Global warming may lead to increased proportions of smaller copepods in the oceans, and to a lower availability of algae-produced essential FAs. In order for changes in the energy transfer in marine food webs to be better understood, it is important that future investigations assess a broader range of diets as well as lipid-poor zooplankton from oceanographic areas throughout the world’s oceans.〈/jats:p〉

Description: The Southern Ocean, in particular the southwest Atlantic sector, is experiencing rapid environmental changes. A long-term trend of density changes of key pelagic species has been noted over the last decades: Antarctic krill populations are declining whilst salps are on the rise and shifting their distribution poleward. A similar poleward expansion is anticipated for a third key player, the hyperiid amphipod crustacean Themisto gaudichaudii, leading to an increasing overlap of the distributions of these three species. Due to major knowledge gaps in the ecology, and genetic connectivity of T. gaudichaudii, the likelihood of this shift and its consequences for the pelagic food web structure remain largely unexplored. In this context, Themisto’s genetic and trophic connectivity as well as thermal response were investigated with state-of-the-art molecular methods. Phylogeographic analyses showed genetic homogeneity between localities in the Southern Ocean and Atlantic waters combined with high degree of phenotypic plasticity enabling different lineages to thrive in regions further south. Diet analyses using DNA metabarcoding were applied to characterize regional variation in diet. These analyses showed a diet predominantly composed of krill, in particular in the Antarctic Peninsula region, showing that Themisto’s poleward range expansion can further impact the already declining krill stocks. It also unexpectedly revealed ctenophores to be an important prey, despite their reputation as “trophic dead-end”. Transcriptome analyses were used to study the thermal response of Themisto individuals from different geographic populations that were experimentally exposed to heat and cold treatments. The analysis of differentially expressed genes showed that genetic lineages differ in thermal tolerances. It also revealed a wide range of molecular mechanisms in Themisto amphipods to cope with thermal stress. These findings contribute to better predict the impact of climate-driven range shifts on the pelagic ecosystems in the Southern Ocean.

Description: Pelagic hyperiid amphipods represent an important trophic link between the herbivore-omnivore zooplankton community and various higher trophic levels. The two pelagic hyperiid amphipods, Themisto gaudichaudii and Vibilia armata, are abundant in the southern Benguela upwelling system. T. gaudichaudii is recognized as a free-swimming species, while V. armata has shown an association with gelatinous zooplankton, particularly during their juvenile stages. So far, morphological identification of prey remains in the stomach contents has been commonly performed to reveal the food items in the diet of hyperiid species. But the stomach content examination technique often overlooked the highly degraded, fragile, and fragmented prey organisms (e.g., gelatinous zooplankton). Thus, the dietary spectra of both species remain poorly understood, especially in the Benguela upwelling system. DNA metabarcoding is an emerging and powerful molecular technique that can be used to investigate diet compositions using DNA fragments available in stomachs or feces. This molecular approach allows prey identification at a high taxonomic resolution to species or genus level, depending on the completeness of the reference database. In this study, we apply DNA metabarcoding to identify the prey composition in the stomachs of T. gaudichaudii and V. armata, targeting the mitochondrial cytochrome c-oxidase subunit 1 (COI) and the nuclear 18S rDNA regions. Further, we assess variations of prey compositions among the different size categories of each species and different localities in the southern Benguela upwelling system. The outcome of this study provides an insight into the trophic status of the two hyperiids and ultimately contributes to a comprehensive understanding of their ecological role in the southern Benguela food web.