Description: A comprehensive understanding of the deep-sea environment and mining’s likely impacts is necessary to assess whether and under what conditions deep-seabed mining operations comply with the International Seabed Authority’s obligations to prevent ‘serious harm’ and ensure the ‘effective protection of the marine environment from harmful effects’ in accordance with the United Nations Convention on the Law of the Sea. A synthesis of the peer-reviewed literature and consultations with deep-seabed mining stakeholders revealed that, despite an increase in deep-sea research, there are few categories of publicly available scientific knowledge comprehensive enough to enable evidence-based decision-making regarding environmental management, including whether to proceed with mining in regions where exploration contracts have been granted by the International Seabed Authority. Further information on deep-sea environmental baselines and mining impacts is critical for this emerging industry. Closing the scientific gaps related to deep-seabed mining is a monumental task that is essential to fulfilling the overarching obligation to prevent serious harm and ensure effective protection, and will require clear direction, substantial resources, and robust coordination and collaboration. Based on the information gathered, we propose a potential high-level road map of activities that could stimulate a much-needed discussion on the steps that should be taken to close key scientific gaps before any exploitation is considered. These steps include the definition of environmental goals and objectives, the establishment of an international research agenda to generate new deep-sea environmental, biological, and ecological information, and the synthesis of data that already exist.

Description: To enable successful management of marine bioinvasions, timely and robust scientific advice is required. This knowledge should inform managers and stakeholders on the magnitude of a pressure (rate of human-mediated introductions), the environmental state of an ecosystem (impacts of non-indigenous species), and the success of management response (prevention, eradication, mitigation). This advice often relies on baseline biodiversity information in the form of measureable parameters (metrics). This can be derived from conventional approaches such as visual surveys, but also by utilizing environmental DNA/RNA-based molecular techniques, which are increasingly being touted as promising tools for assessing biodiversity and detecting rare or invasive species. Depending on the stage of incursion, each approach has merits and limitations. In this review we assess the performance of biosecurity-relevant biodiversity parameters derived from eDNA/eRNA samples and discuss the results in relation to different stages of invasion and management applications. The overall performance of considered methods ranged between 42 and 90% based on defined criteria, with target-specific approaches scoring higher for respective biosecurity applications, followed by eDNA metabarcoding. Caveats are discussed along with avenues which may enhance these techniques and their successful uptake for marine biosecurity surveillance and management. To facilitate and encourage uptake of these techniques, there is a need for an international collaborative framework aimed at unifying molecular sampling and analysis methodologies. Improvement of quantitative capacity and cost-efficiency will also enhance their integration in biosecurity programmes.

Description: Food webs are central entities mediating processes and external pressures in marine ecosystems. They are essential to understand and predict ecosystem dynamics and provision of ecosystem services. Paradoxically, utilization of food web knowledge in marine environmental conservation and resource management is limited. To better understand the use of knowledge and barriers to incorporation in management, we assess its application related to the management of eutrophication, chemical contamination, fish stocks, and non-indigenous species. We focus on the Baltic, a severely impacted, but also intensely studied and actively managed semi-enclosed sea. Our assessment shows food web processes playing a central role in all four areas, but application varies strongly, from formalized integration in management decisions, to support in selecting indicators and setting threshold values, to informal knowledge explaining ecosystem dynamics and management performance. Barriers for integration are complexity of involved ecological processes and that management frameworks are not designed to handle such information. We provide a categorization of the multi-faceted uses of food web knowledge and benefits of future incorporation in management, especially moving towards ecosystem-based approaches as guiding principle in present marine policies and directives. We close with perspectives on research needs to support this move considering global and regional change.

Description: The Global Ocean Ship-Based Hydrographic Investigations Program (GO-SHIP) provides a globally coordinated network and oversight of 55 sustained decadal repeat hydrographic reference lines. GO-SHIP is part of the global ocean/climate observing systems (GOOS/GCOS) for study of physical oceanography, the ocean carbon, oxygen and nutrient cycles, and marine biogeochemistry. GO-SHIP enables assessment of the ocean sequestration of heat and carbon, changing ocean circulation and ventilation patterns, and their effects on ocean health and Earth's climate. Rapid quality control and open data release along with incorporation of the GO-SHIP effort in the Joint Technical Commission for Oceanography and Marine Meteorology (JCOMM) in situ Observing Programs Support Center (JCOMMOPS) have increased the profile of, and participation in, the program and led to increased data use for a range of efforts. In addition to scientific discovery, GO-SHIP provides climate quality observations for ongoing calibration of measurements from existing and new autonomous platforms. This includes biogeochemical observations for the nascent array of biogeochemical (BGC)-Argo floats; temperature and salinity for Deep Argo; and salinity for the core Argo array. GO-SHIP provides the relevant suite of global, full depth, high quality observations and co-located deployment opportunities that, for the foreseeable future, remain crucial to maintenance and evolution of Argo's unique contribution to climate science. The evolution of GO-SHIP from a program primarily focused on physical climate to increased emphasis on ocean health and sustainability has put an emphasis on the addition of essential ocean variables for biology and ecosystems in the program measurement suite. In conjunction with novel automated measurement systems, ocean color, particulate matter, and phytoplankton enumeration are being explored as GO-SHIP variables. The addition of biological and ecosystem measurements will enable GO-SHIP to determine trends and variability in these key indicators of ocean health. The active and adaptive community has sustained the network, quality and relevance of the global repeat hydrography effort through societally important scientific results, increased exposure, and interoperability with new efforts and opportunities within the community. Here we provide key recommendations for the continuation and growth of GO-SHIP in the next decade.

Description: The ²³⁴Th-²³⁸U radioactive pair has been extensively used to evaluate the efficiency with which photosyntetically fixed carbon is exported from the surface ocean by means of the biological pump since the 90's. The seminal work of Buesseler et al. (1992) proposed that particulate organic carbon (POC) flux can be indirectly calculated from ²³⁴Th distributions if the ratio of POC to ²³⁴Th measured on sinking particles (POC:²³⁴Th) at the desired export depth is known. Since then, a huge amount of ²³⁴Th depth profiles have been collected using a variety of sampling instruments and strategies that have changed along years. This is a global oceanic compilation of ²³⁴Th measurements, that collects results from innumerable researchers and laboratories over a period exceeding 50 years. The present compilation is made of a total 223 datasets: 214 from studies published either in articles in referred journals, PhD thesis or repositories, and 9 unpublished datasets. Including measurements from JGOFS, VERTIGO and GEOTRACES programs, with sampling from approximately 5000 locations spanning all the oceans. The compilation includes total ²³⁴Th profiles, dissolved and particulate ²³⁴Th concentrations, and POC:²³⁴Th ratios (both from pumps and sediment traps) for two sizes classes (1-53 μm and 〈 53 μm) when available. Appropriate metadata have been included, including geographic location, date, and sample depth, among others. When available, we also include water temperature, salinity, ²³⁸U data and particulate organic nitrogen data. Data sources and methods information (including ²³⁸U and ²³⁴Th) are also detailed along with valuable information for future data analysis such as bloom stage and steady/non-steady state conditions at the sampling moment. This undertaking is a treasure of data to understand and quantify how oceanic carbon cycle functions and how it will change in future. The compilation can be downloaded in three different ways: 1) A single merged file including all the individual excel files. This option can be accessed under "Other version: More than 50 years of Th-234 data: a comprehensive global oceanic compilation (single xlsx file)". 2) A summary table that includes details from cruise, sampling dates, techniques applied, authors and DOI of the compiled ²³⁴Th data, among others, each line corresponds to a specific dataset. The table can be accessed by clicking ""View dataset as HTML" and downloaded in "Download dataset as tab-delimited text". 3) Individual Excel files for each dataset can be manually chosen from the summary table, corresponding to the complete ²³⁴Th dataset and metadata from a specific publication or program. This option is available by clicking "View dataset as HTML". Furthermore, all files referred to can be downloaded in one go as ZIP or TAR.

Description: This paper provides a comprehensive description of the newest version of the Dynamic Global Vegetation Model with managed Land, LPJmL4. This model simulates – internally consistently – the growth and productivity of both natural and agricultural vegetation as coherently linked through their water, carbon, and energy fluxes. These features render LPJmL4 suitable for assessing a broad range of feedbacks within and impacts upon the terrestrial biosphere as increasingly shaped by human activities such as climate change and land use change. Here we describe the core model structure, including recently developed modules now unified in LPJmL4. Thereby, we also review LPJmL model developments and evaluations in the field of permafrost, human and ecological water demand, and improved representation of crop types. We summarize and discuss LPJmL model applications dealing with the impacts of historical and future environmental change on the terrestrial biosphere at regional and global scale and provide a comprehensive overview of LPJmL publications since the first model description in 2007. To demonstrate the main features of the LPJmL4 model, we display reference simulation results for key processes such as the current global distribution of natural and managed ecosystems, their productivities, and associated water fluxes. A thorough evaluation of the model is provided in a companion paper. By making the model source code freely available at https://gitlab.pik-potsdam.de/lpjml/LPJmL, we hope to stimulate the application and further development of LPJmL4 across scientific communities in support of major activities such as the IPCC and SDG process.

Description: The dynamic global vegetation model LPJmL4 is a process-based model that simulates climate and land use change impacts on the terrestrial biosphere, agricultural production, and the water and carbon cycle. Different versions of the model have been developed and applied to evaluate the role of natural and managed ecosystems in the Earth system and the potential impacts of global environmental change. A comprehensive model description of the new model version, LPJmL4, is provided in a companion paper (Schaphoff et al., 2018c). Here, we provide a full picture of the model performance, going beyond standard benchmark procedures and give hints on the strengths and shortcomings of the model to identify the need for further model improvement. Specifically, we evaluate LPJmL4 against various datasets from in situ measurement sites, satellite observations, and agricultural yield statistics. We apply a range of metrics to evaluate the quality of the model to simulate stocks and flows of carbon and water in natural and managed ecosystems at different temporal and spatial scales. We show that an advanced phenology scheme improves the simulation of seasonal fluctuations in the atmospheric CO2 concentration, while the permafrost scheme improves estimates of carbon stocks. The full LPJmL4 code including the new developments will be supplied open source through https://gitlab.pik-potsdam.de/lpjml/LPJmL. We hope that this will lead to new model developments and applications that improve the model performance and possibly build up a new understanding of the terrestrial biosphere.