Description: The neritic-oceanic squid Illex argentinus supports one of the largest fisheries in the Southwest Atlantic. It is characterized by extensive migrations across the Patagonian Shelf and complex population structure comprising distinct seasonal spawning groups. To address uncertainty as to the demographic independence of these groups that may compromise sustainable management, a multidisciplinary approach was applied integrating statolith ageing with genome-wide single-nucleotide polymorphism (SNP) analysis. To obtain complete coverage of the spawning groups, sampling was carried out at multiple times during the 2020 fishing season and covered a large proportion of the species' range across the Patagonian Shelf. Statolith and microstructure analysis revealed three distinct seasonal spawning groups of winter-, spring-, and summer-hatched individuals. Subgroups were identified within each seasonal group, with statolith microstructure indicating differences in environmental conditions during ontogeny. Analysis of 〉10 000 SNPs reported no evidence of neutral or non-neutral genetic structure among the various groups. These findings indicate that I. argentinus across the Patagonian Shelf belong to one genetic population and a collaborative management strategy involving international stakeholders is required. The connectivity among spawning groups may represent a "bet-hedging" mechanism important for population resilience.

Description: The development and physiology of herring larvae were monitored for individuals reared in control and combined warming-acidification crossed with different food quality treatments. The experiment revealed that warming and acidification triggers a stress response at the molecular level and decrease herring larvae size-at-stage. Global change puts coastal systems under pressure, affecting the ecology and physiology of marine organisms. In particular, fish larvae are sensitive to environmental conditions, and their fitness is an important determinant of fish stock recruitment and fluctuations. To assess the combined effects of warming, acidification and change in food quality, herring larvae were reared in a control scenario (11 & DEG;C*pH 8.0) and a scenario predicted for 2100 (14 & DEG;C*pH 7.6) crossed with two feeding treatments (enriched in phosphorus and docosahexaenoic acid or not). The experiment lasted from hatching to the beginning of the post-flexion stage (i.e. all fins present) corresponding to 47 days post-hatch (dph) at 14 & DEG;C and 60 dph at 11 & DEG;C. Length and stage development were monitored throughout the experiment and the expression of genes involved in growth, metabolic pathways and stress responses were analysed for stage 3 larvae (flexion of the notochord). Although the growth rate was unaffected by acidification and temperature changes, the development was accelerated in the 2100 scenario, where larvae reached the last developmental stage at a smaller size (-8%). We observed no mortality related to treatments and no effect of food quality on the development of herring larvae. However, gene expression analyses revealed that heat shock transcripts expression was higher in the warmer and more acidic treatment. Our findings suggest that the predicted warming and acidification environment are stressful for herring larvae, inducing a decrease in size-at-stage at a precise period of ontogeny. This could either negatively affect survival and recruitment via the extension of the predation window or positively increase the survival by reducing the larval stage duration.

Description: The round goby, Neogobius melanostomus (Pallas, 1814), is one of the most invasive non-indigenous species in the Baltic Sea. It dominates coastal fisheries in some localities and is frequently found in offshore pelagic catches. This paper identifies management issues and suggests actions to be considered for post-invasion management. Priority should be given to the establishment of a coordinated pan-Baltic monitoring programme and associated data storage and exchange, as well as the compilation of landing statistics of the round goby in commercial and recreational fisheries. While eradication is unrealistic, population control that leads to minimising the risk of transfer to yet uncolonised areas in the Baltic Sea and adjacent waterbodies is feasible. This should comprise the requirement that the species be landed in commercial fishery bycatch, the management of ships’ ballast water and sediments, and hull fouling of inland and sea-going vessels, including recreational boats. Extensive involvement of stakeholders is crucial at all phases of the management process.

Description: Biological invasions are a global challenge that has received insufficient attention. Recently available cost syntheses have provided policy- and decision makers with reliable and up-to-date information on the economic impacts of biological invasions, aiming to motivate effective management. The resultant InvaCost database is now publicly and freely accessible and enables rapid extraction of monetary cost information. This has facilitated knowledge sharing, developed a more integrated and multidisciplinary network of researchers, and forged multidisciplinary collaborations among diverse organizations and stakeholders. Over 50 scientific publications so far have used the database and have provided detailed assessments of invasion costs across geographic, taxonomic, and spatiotemporal scales. These studies have provided important information that can guide future policy and legislative decisions on the management of biological invasions while simultaneously attracting public and media attention. We provide an overview of the improved availability, reliability, standardization, and defragmentation of monetary costs; discuss how this has enhanced invasion science as a discipline; and outline directions for future development.

Description: Introduced Marine Pests (IMP, = non-indigenous marine species) prevention, early detection and risk-based management strategies have become the priority for biosecurity operations worldwide, in recognition of the fact that, once established, the effective management of marine pests can rapidly become cost prohibitive or impractical. In Western Australia (WA), biosecurity management is guided by the " Western Australian Prevention List for Introduced Marine Pests " which is a policy tool that details species or genera as being of high risk to the region. This list forms the basis of management efforts to prevent introduction of these species, monitoring efforts to detect them at an early stage, and rapid response should they be detected. It is therefore essential that the species listed can be rapid and confidently identified and discriminated from native species by a range of government and industry stakeholders. Recognising that identification of these species requires very specialist expertise which may be in short supply and not readily accessible in a regulatory environment, and the fact that much publicly available data is not verifiable or suitable for regulatory enforcement, the WA government commissioned the current project to collate a reference collection of these marine pest specimens. In this work, we thus established collaboration with researchers worldwide in order to source representative specimens of the species listed. Our main objective was to build a reference collection of taxonomically vouchered specimens and subsequently to generate species-specific DNA barcodes suited to supporting their future identification. To date, we were able to obtain specimens of 75 species (representative of all but four of the pests listed) which have been identified by experts and placed with the WA Government Department of Fisheries and, where possible, in accessible museums and institutions in Australasia. The reference collection supports the fast and reliable taxonomic and molecular identification of marine pests in WA and constitutes a valuable resource for training of stakeholders with interest in IMP recognition in Australia. The reference collection is also useful in supporting the development of a variety of DNA-based detection strategies such as real-time PCR and metabarcoding of complex environmental samples (e.g. biofouling communities). The Prevention List is under regular review to ensure its continued relevance and that it remains evidence and risk-based. Similarly, its associated reference collection also remains to some extent a work in progress. In recognition of this fact, this report seeks to provide details of this continually evolving information repository publicly available to the biosecurity management community worldwide

Description: An as-yet-undescribed, non-indigenous polychaete species was found at very high densities in the eastern part of the Baltic Sea in Estonia in 2012. The species belongs to the sabellid genus Laonome Malmgren, 1866, but it could not be assigned to any of the previously described species. To date, the species has established a stable population after surviving a notably cold winter (2012/2013). To study the local distribution and abundance of the species, a spatial grid with some stations repeated seasonally and interannually was sampled in a quantitative manner. Based of the survey data and available environmental data, the variables that contributed significantly to explaining variation in the abundance of the polychaete were determined using the Boosted Regression Trees modelling approach. Molecular barcodes to characterize the identity of the species were also established. The abundance of Laonome sp. exhibited strong seasonal variation, peaking between July and November. Besides seasonality, the quantity of decomposed microalgae in the sediment and wave exposure best explained the variation in abundance. Laonome sp. is now well-established in the Baltic Sea and locally reached high densities in low salinity areas. This non-indigenous polychaete may potentially modify sediment morphology and chemistry and disrupt the natural infaunal communities. Laonome sp. could displace or even completely eliminate some species currently present in the study area and beyond if it spreads; however, it could also facilitate currently-present species through the provision of alternative substrate and/or food. Given its persistence and high abundance in Pärnu Bay, colonization of other low-salinity areas of the Baltic Sea can be expected.

Description: Machine learning covers a large set of algorithms that can be trained to identify patterns in data. Thanks to the increase in the amount of data and computing power available, it has become pervasive across scientific disciplines. We first highlight why machine learning is needed in marine ecology. Then we provide a quick primer on machine learning techniques and vocabulary. We built a database of & SIM;1000 publications that implement such techniques to analyse marine ecology data. For various data types (images, optical spectra, acoustics, omics, geolocations, biogeochemical profiles, and satellite imagery), we present a historical perspective on applications that proved influential, can serve as templates for new work, or represent the diversity of approaches. Then, we illustrate how machine learning can be used to better understand ecological systems, by combining various sources of marine data. Through this coverage of the literature, we demonstrate an increase in the proportion of marine ecology studies that use machine learning, the pervasiveness of images as a data source, the dominance of machine learning for classification-type problems, and a shift towards deep learning for all data types. This overview is meant to guide researchers who wish to apply machine learning methods to their marine datasets.

Description: Biological invasions by non-indigenous species are considered a leading threat to biodiversity, with prevention being a key management strategy. Consequently, numerous commercial ballast water treatment systems have been, or are being, developed to prevent future aquatic invasions. However, most treatment systems are being designed for the many vessels undertaking long transoceanic voyages in marine waters rather than the relatively few vessels operating on short voyages in freshwater, such as those in the Laurentian Great Lakes. Here we conduct testing of the biological efficacy of a 40 µm ballast water filtration unit through shipboard trials. We test the hypotheses that i) filtration will significantly reduce abundance of zooplankton greater than 50 µm in size but not phytoplankton 10 to 50 µm in size; ii) filtration will reduce zooplankton abundances in ballast water below International Maritime Organization discharge standards, but not those of phytoplankton; and iii) filtration will alter the community composition of zooplankton, non-randomly reducing invasion risk of larger taxa. During the summer of 2012, three shipboard trials were conducted. Ballast water samples were collected using a before-after experimental design. Our study showed that filtration significantly reduced abundance of copepods and cladocerans, but not of juvenile dreissenid veligers and rotifers. Contrary to our expectation, phytoplankton densities were also significantly lower after the treatment. Overall, ballast water treated during our tests would not meet proposed international discharge standards. Filtration altered relative abundance of zooplankton, but did not reduce introduction risk of any taxonomic group due to the small juvenile stages and dormant eggs which passed through the treatment. While we do not rule out filtration as a ballast water treatment option for zooplankton in the future, our tests indicate further development is required for meaningful reduction of invasion risk.

Description: The Laurentian Great Lakes have been successfully invaded by at least 182 nonindigenous species. Here we report on two new species, water hyacinth Eichhornia crassipes and water lettuce Pistia stratiotes, that were found at a number of locations in Lake St. Clair and Detroit River during autumn 2010. Both species are commonly sold in the water garden and aquarium trade in southern Ontario and elsewhere. While it is not clear whether these species are established or can establish in the Great Lakes, the historic assumption that neither of these subtropical to tropical plants pose an invasion risk must be questioned in the light of changing environmental conditions associated with climate warming that may render Great Lakes’ habitats more suitable for these species and increase the likelihood of their successful establishment.

Description: The North-American amphipod Gammarus tigrinus Sexton, 1939 is a successful invader in European waters due to its high reproductive potential and tolerance to severe environmental conditions and various pollutants. In this study, we followed the invasion and establishment of this exotic species in a species-poor ecosystem of the northern Baltic Sea. Two years after the establishment of G. tigrinus, over half of the sampling sites were occupied exclusively by G. tigrinus, whereas G. tigrinus coexisted with native gammarids in only one tenth of all sites. There was a clear separation of habitat occupancy between native species and G. tigrinus in terms of abiotic environment and macrophytic habitat. G. tigrinus preferred shallow sheltered areas dominated by vascular plants, while native species mainly occurred in more exposed, deeper habitats with phaeophytes and rhodophytes. In its suboptimal habitats, G. tigrinus exhibited moderate abundances, which allowed for the coexistence of native gammarids and the invasive gammarid. Since its establishment, the abundance of G. tigrinus has showed no signs of decline, with abundances exceeding almost fifteen times those of native gammarids at some locations. The results suggest that, irrespective to the competitive superiority of G. tigrinus over the native gammarids, the invasive G. tigrinus does not monopolize the entire coastal area of the northern Baltic Sea but mostly outcompetes native species in its favoured habitats..