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  • PANGAEA  (25)
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Keywords
Years
  • 1
    Publication Date: 2024-03-14
    Description: We used carbon and nitrogen stable isotope (δ13C and δ15N) analyses to investigate the trophic network of the CWC reef habitat off Angola (SE Atlantic Ocean). Samples were collected in January 2016 during the M122 (“ANNA”) expedition on board R/V Meteor. In total, 18 reef sites, including seven CWC mound settings over a bathymetric range of 250 to 530 m water depth, were sampled for stable isotope analyses. Samples of organisms belonging to the taxa Porifera, Cnidaria, Arthropoda, Annelida, Echinodermata and Chordata were collected by means of a box corer, a Van-Veen grab sampler and the Remotely Operated Vehicle (ROV) SQUID (MARUM, Bremen, Germany). To investigate potential food sources of the benthic megafauna, three types of Particulate Organic Matter (POM) were collected: Suspended Particulate Organic Matter (SPOM) was collected with a McLane phytoplankton pump; settling SPOM was collected with a sediment trap (SPOM trap) and sediment samples were collected with a box corer and a grab sampler. Analyses of benthic megafauna were performed using a Elementar IsoPrime 100 isotope ratio–mass spectrometry (IR–MS) (IsoPrime Ltd.) coupled to a CNS elemental analyzer (Elementar Vario Pyro Cube EA CNS; Elementar Analysensysteme GmbH), while POM samples were analyzed by a Delta V Advantage IR–MS coupled online to an elemental analyzer (Flash 2000 EA-IRMS) by a ConFlo IV (Thermo Fisher Scientific Inc.). Vienna Pee Dee belemnite (V.P.D.B.) for carbon, and atmospheric N2 (Air) for nitrogen, were used as reference materials, and stable isotope values are reported in respect to that.
    Keywords: ALBEX lander; Angola; Angola CWC reefs; Class; DATE/TIME; Eastern South Atlantic; ELEVATION; Event label; Family; Gear; Genus; GeoB20904-1; GeoB20910-1; GeoB20913-1; GeoB20916-1; GeoB20917-1; GeoB20917-2; GeoB20920-1; GeoB20920-4; GeoB20921-1; GeoB20927-1; GeoB20930-1; GeoB20933-2; GeoB20933-3; GeoB20934-2; GeoB20940-1; GeoB20953-2; GeoB20955-1; GeoB20957-1; GeoB20957-3; Giant box corer; GKG; Grab; GRAB; iAtlantic; Integrated Assessment of Atlantic Marine Ecosystems in Space and Time; Isotope ratio mass spectrometry; LATITUDE; LONGITUDE; M122; M122_087-1; M122_093-1; M122_096-1; M122_099-1; M122_100-1; M122_103-1; M122_104-1; M122_110-1; M122_113-1; M122_116-2; M122_116-3; M122_117-2; M122_124-1; M122_137-2; M122_139-1; M122_141-1; Meteor (1986); NIOZL; Order; Phylum; Remote operated vehicle; ROV; Sample code/label; Sample type; SE Atlantic; Site; Species; Species, unique identification (Semantic URI); Species, unique identification (URI); Stable carbon isotope (δ13C); stable nitrogen isotope (δ15N); δ13C; δ13C, standard deviation; δ15N; δ15N, standard deviation
    Type: Dataset
    Format: text/tab-separated-values, 961 data points
    Location Call Number Limitation Availability
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  • 2
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    PANGAEA
    In:  Supplement to: Bramanti, Lorenzo; Movilla, Juancho; Guron, Maricel; Calvo, Eva; Gori, Andrea; Dominguez-Cariò, Carlos; Grinyó, Jordi; Lopez-Sanz, Angel; Martinez-Quintana, Angela; Pelejero, Carles; Ziveri, Patrizia; Rossi, Sergio (2013): Detrimental effects of ocean acidification on the economically important Mediterranean red coral (Corallium rubrum). Global Change Biology, 19(6), 1897-1908, https://doi.org/10.1111/gcb.12171
    Publication Date: 2024-03-18
    Description: We evaluated the effects of low pH on Corallium rubrum from aquaria experiments. Several colonies of C. rubrum were long-term maintained for 314 days in aquaria at two different pH levels (8.10 and 7.81, pHT). Calcification rate, spicule morphology, major biochemical constituents (protein, carbohydrates and lipids) and fatty acids composition were measured periodically. Exposure to lower pH conditions caused a significant decrease in the skeletal growth rate in comparison to the control treatment. Similarly, the spicule morphology clearly differed between both treatments at the end of the experiment, with aberrant shapes being observed only under the acidified conditions. On the other hand, while total organic matter was significantly higher under low pH conditions, no significant differences were detected between treatments regarding total carbohydrate, lipid, protein and fatty acid composition. However, the lower variability found among samples maintained in acidified conditions relative to controls, suggests a possible effect of pH decrease on the metabolism of the colonies. Our results show, for the first time, evidence of detrimental ocean acidification effects on this valuable and endangered coral species.
    Keywords: Cap-de-Creus; EXP; Experiment; Mediterranean Sea; Mediterranean Sea Acidification in a Changing Climate; MedSeA
    Type: Dataset
    Format: application/zip, 4 datasets
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2024-03-23
    Description: A 9-month aquarium experiment with the cold-water Dendrophyllia cornigera was conducted to investigate the single and combined effects of warming, acidification and deoxygenation on its ecophysiological response. The experiment took place at the Aquarium finisterrae (A Coruña, Spain) between 2022-05-06 and 2023-02-24. Treatment values for each parameter (current in situ vs. climate change) were: 12 °C and 15 °C (temperature); ~7.99 and 7.69 (pH); ~8.63 mg/L and 6.45 mg/L (dissolved oxygen concentration). A total of eight treatments (with 3 replicates each, 5 L aquaria) were set up. Dry mass of the coral nubbins (3 per experimental aquarium) was assessed by means of the buoyant weight technique (Jokiel et al. 1978, Davies, 1989), using an analytical balance (OHAUS AX124, precision 0.1 mg). The dry mass was calculated considering the nubbin net weight in water, the water density and the skeletal density of D. cornigera (2.63 g/cm3; Movilla et al. 2014). Measurements were performed just once the acclimation time finished and after 2 , 4, 6 and 9 months under the experimental conditions. Skeletal growth rates were calculated as the slope of the linear regression between the logarithmically transformed dry mass and the experimental time (%/day) (Orejas et al. 2011).
    Keywords: Buoyant weighing technique according to Davies (1989); Dendrophyllia_cornigera_Coral_Bycatch_A_Coruna; Dendrophyllia cornigera; Dendrophyllia cornigera, skeletal growth rate; Experimental treatment; growth; iAtlantic; Integrated Assessment of Atlantic Marine Ecosystems in Space and Time; Laboratory experiment; Multiple stressors; NE Atlantic; North Atlantic Ocean; NW Spain; Replicate; Species; Species, unique identification (Semantic URI); Species, unique identification (URI); Specimen identification; Type of study
    Type: Dataset
    Format: text/tab-separated-values, 576 data points
    Location Call Number Limitation Availability
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  • 4
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    PANGAEA
    In:  Supplement to: Gori, Andrea; Ferrier-Pagès, Christine; Hennige, Sebastian J; Murray, Fiona; Rottier, Céline; Wicks, L C; Roberts, J Murray (2016): Physiological response of the cold-water coral Desmophyllum dianthus to thermal stress and ocean acidification. PeerJ, 4, e1606, https://doi.org/10.7717/peerj.1606
    Publication Date: 2024-03-15
    Description: Rising temperatures and ocean acidification driven by anthropogenic carbon emissions threaten both tropical and temperate corals. However, the synergistic effect of these stressors on coral physiology is still poorly understood, in particular for cold-water corals. This study assessed changes in key physiological parameters (calcification, respiration and ammonium excretion) of the widespread cold-water coral Desmophyllum dianthus maintained for 8 months at two temperatures (ambient 12 °C and elevated 15 °C) and two pCO2 conditions (ambient 390 ppm and elevated 750 ppm). At ambient temperatures no change in instantaneous calcification, respiration or ammonium excretion rates was observed at either pCO2 levels. Conversely, elevated temperature (15 °C) significantly reduced calcification rates, and combined elevated temperature and pCO2 significantly reduced respiration rates. Changes in the ratio of respired oxygen to excreted nitrogen (O:N), which provides information on the main sources of energy being metabolized, indicated a shift from mixed use of protein and carbohydrate/lipid as metabolic substrates under control conditions, to less efficient protein-dominated catabolism under both stressors. Overall, this study shows that the physiology of D. dianthus is more sensitive to thermal than pCO2 stress, and that the predicted combination of rising temperatures and ocean acidification in the coming decades may severely impact this cold-water coral species.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Ammonium, excretion; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Benthic animals; Benthos; Bicarbonate ion; Calcification/Dissolution; Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2calc; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Containers and aquaria (20-1000 L or 〈 1 m**2); Deep-sea; Desmophyllum dianthus; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Laboratory experiment; Mediterranean Sea; Net calcification rate of calcium carbonate; OA-ICC; Ocean Acidification International Coordination Centre; Other metabolic rates; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Potentiometric; Potentiometric titration; Registration number of species; Replicate; Respiration; Respiration rate, carbon; Salinity; Salinity, standard deviation; Single species; Species; Temperate; Temperature; Temperature, water; Temperature, water, standard deviation; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 432 data points
    Location Call Number Limitation Availability
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  • 5
    Publication Date: 2024-03-14
    Keywords: Area/locality; Cantabrian Sea; cold-water corals; DEPTH, sediment/rock; Event label; fatty acids; fatty alcohols; Garcia del Cid; INDEMARES-4; INDEMARES-4_Menorca-Corals; INDEMARES-4_Menorca-Sediment; JAGO; lipids; M84/5; M84/5_Cantabrian-Sea; Mediterranean Sea; Meteor (1986); Sample material; Species; sterols; Sterols; Submersible JAGO; Television-Grab; TVG; van Veen Grab; VGRAB
    Type: Dataset
    Format: text/tab-separated-values, 198 data points
    Location Call Number Limitation Availability
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  • 6
    Publication Date: 2024-03-14
    Keywords: Area/locality; Cantabrian Sea; cold-water corals; DEPTH, sediment/rock; Event label; fatty acids; fatty alcohols; Fatty alcohols; Garcia del Cid; INDEMARES-4; INDEMARES-4_Menorca-Corals; INDEMARES-4_Menorca-Sediment; JAGO; lipids; M84/5; M84/5_Cantabrian-Sea; Mediterranean Sea; Meteor (1986); Sample material; Species; sterols; Submersible JAGO; Television-Grab; TVG; van Veen Grab; VGRAB
    Type: Dataset
    Format: text/tab-separated-values, 198 data points
    Location Call Number Limitation Availability
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  • 7
    Publication Date: 2024-03-14
    Keywords: Area/locality; Cantabrian Sea; cold-water corals; DEPTH, sediment/rock; Event label; fatty acids; Fatty acids; fatty alcohols; Garcia del Cid; INDEMARES-4; INDEMARES-4_Menorca-Corals; INDEMARES-4_Menorca-Sediment; JAGO; lipids; M84/5; M84/5_Cantabrian-Sea; Mediterranean Sea; Meteor (1986); Monounsaturated fatty acids; Polyunsaturated fatty acids; Sample material; Saturated fatty acids; Species; sterols; Submersible JAGO; Television-Grab; TVG; van Veen Grab; VGRAB
    Type: Dataset
    Format: text/tab-separated-values, 550 data points
    Location Call Number Limitation Availability
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  • 8
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    PANGAEA
    In:  Supplement to: Gori, Andrea; Tolosa, Imma; Orejas, Covadonga; Rueda, Lucia; Viladrich, Nuria; Grinyó, Jordi; Flögel, Sascha; Grover, Renaud; Ferrier-Pagès, Christine (2018): Biochemical composition of the cold-water coral Dendrophyllia cornigera under contrasting productivity regimes: Insights from lipid biomarkers and compound-specific isotopes. Deep Sea Research Part I: Oceanographic Research Papers, 141, 106-117, https://doi.org/10.1016/j.dsr.2018.08.010
    Publication Date: 2024-03-14
    Description: The cold-water coral (CWC) Dendrophyllia cornigera is widely distributed in areas of both high and low productivity, suggesting a significant trophic plasticity of this coral depending on the food available in the environment. In this study, lipid biomarkers and their isotopic signature were compared in colonies of D. cornigera and sediment from the highly productive Cantabrian Sea (Northeast Atlantic Ocean) and the less productive Menorca Channel (Western Mediterranean Sea). Lipid content and composition in coral tissue clearly reflected the contrasting productivity in the two areas. Cantabrian corals presented higher content in fatty acids (FA), fatty alcohols and sterols than Menorca corals. Energy storage (saturated + mono-unsaturated FA) to structural (poly-unsaturated FA) ratio was higher in Cantabrian than in Menorca corals. The high ΣC20:1 content as well as PUFA(n-3)/PUFA(n-6) ratio suggest that Cantabrian corals mainly feed on phytoplankton and herbivorous grazers. This is also supported by the higher mono-unsaturated fatty alcohols (MUOH) and long chain mono-unsaturated fatty alcohols (LCMUOH) content in Cantabrian compared to Menorca corals. Conversely, higher PUFA(n-6) content in Menorca corals, with the dominance of C22:4(n-6) and C20:4(n-6), as well as the dominance of cholesterol and norC27Δ5,22 among sterols, point to a higher trophic role of dinoflagellates and invertebrates. The observed geographical variability in trophic ecology supports a high trophic plasticity of D. cornigera, which may favour the wide distribution of this CWC in areas with highly contrasted food availability.
    Keywords: Cantabrian Sea; cold-water corals; fatty acids; fatty alcohols; lipids; Mediterranean Sea; sterols
    Type: Dataset
    Format: application/zip, 3 datasets
    Location Call Number Limitation Availability
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  • 9
    Publication Date: 2024-03-18
    Keywords: Alkalinity, total; Animalia; Aquarium number; Aragonite saturation state; Area/perimeter ratio; Benthic animals; Benthos; Bicarbonate ion; Buoyant weighing technique according to Davies (1989); Calcification/Dissolution; Calcification rate of calcium carbonate; Calcite saturation state; Calculated using CO2calc; Calculated using seacarb after Nisumaa et al. (2010); Cap-de-Creus; Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Circularity; Cnidaria; Coast and continental shelf; Colony number/ID; Comment; Containers and aquaria (20-1000 L or 〈 1 m**2); Corallium rubrum; DATE/TIME; Dry mass; EXP; Experiment; Foil mass; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Height/width ratio; Inorganic matter; Laboratory experiment; Mass; Mediterranean Sea; Number; OA-ICC; Ocean Acidification International Coordination Centre; ORDINAL NUMBER; Organic matter; Organic matter, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Potentiometric; Potentiometric titration; Ratio; Salinity; Sample comment; Sample mass; Single species; Species; Temperate; Temperature, water; Treatment; xCO2 (ambient atmosphere, dry air)
    Type: Dataset
    Format: text/tab-separated-values, 13721 data points
    Location Call Number Limitation Availability
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  • 10
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    PANGAEA
    In:  Supplement to: Movilla, Juancho; Gori, Andrea; Calvo, Eva; Orejas, Covadonga; Lopez-Sanz, Angel; Domínguez-Carrió, Carlos; Grinyó, Jordi; Pelejero, Carles (2014): Resistance of Two Mediterranean Cold-Water Coral Species to Low-pH Conditions. Water, 6(1), 59-67, https://doi.org/10.3390/w6010059
    Publication Date: 2024-03-18
    Description: Deep-water ecosystems are characterized by relatively low carbonate concentration values and, due to ocean acidification (OA), these habitats might be among the first to be exposed to undersaturated conditions in the forthcoming years. However, until now, very few studies have been conducted to test how cold-water coral (CWC) species react to such changes in the seawater chemistry. The present work aims to investigate the mid-term effect of decreased pH on calcification of the two branching CWC species most widely distributed in the Mediterranean, Lophelia pertusa and Madrepora oculata. No significant effects were observed in the skeletal growth rate, microdensity and porosity of both species after 6 months of exposure. However, while the calcification rate of M. oculata was similar for all colony fragments, a heterogeneous skeletal growth pattern was observed in L. pertusa, the younger nubbins showing higher growth rates than the older ones. A higher energy demand is expected in these young, fast-growing fragments and, therefore, a reduction in calcification might be noticed earlier during long-term exposure to acidified conditions.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Benthic animals; Benthos; Bicarbonate ion; Bicarbonate ion, standard deviation; Calcification/Dissolution; Calcification rate of calcium carbonate; Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2calc; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Cnidaria; Containers and aquaria (20-1000 L or 〈 1 m**2); Deep-sea; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Identification; Incubation duration; Laboratory experiment; Lophelia pertusa; Madrepora oculata; Mass; Mediterranean Sea; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Potentiometric titration; Salinity; Salinity, standard deviation; Single species; Species; Spectrophotometric; Temperate; Temperature, water; Temperature, water, standard deviation; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 8700 data points
    Location Call Number Limitation Availability
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