Description: Within the COST action EMBOS (European Marine Biodiversity Observatory System) the degree and variation of the diversity and densities of soft-bottom communities from the lower intertidal or the shallow subtidal was measured at 28 marine sites along the European coastline (Baltic, Atlantic, Mediterranean) using jointly agreed and harmonized protocols, tools and indicators. The hypothesis tested was that the diversity for all taxonomic groups would decrease with increasing latitude. The EMBOS system delivered accurate and comparable data on the diversity and densities of the soft sediment macrozoobenthic community over a large-scale gradient along the European coastline. In contrast to general biogeographic theory, species diversity showed no linear relationship with latitude, yet a bell-shaped relation was found. The diversity and densities of benthos were mostly positively correlated with environmental factors such as temperature, salinity, mud and organic matter content in sediment, or wave height, and related with location characteristics such as system type (lagoons, estuaries, open coast) or stratum (intertidal, subtidal). For some relationships, a maximum (e.g. temperature from 15–20°C; mud content of sediment around 40%) or bimodal curve (e.g. salinity) was found. In lagoons the densities were twice higher than in other locations, and at open coasts the diversity was much lower than in other locations. We conclude that latitudinal trends and regional differences in diversity and densities are strongly influenced by, i.e. merely the result of, particular sets and ranges of environmental factors and location characteristics specific to certain areas, such as the Baltic, with typical salinity clines (favouring insects) and the Mediterranean, with higher temperatures (favouring crustaceans). Therefore, eventual trends with latitude are primarily indirect and so can be overcome by local variation of environmental factors.

Description: Highlights: • Feeding overlap was highly expressed between native and non-native oyster. • Differences were recorded in zooplankton but not in phytoplankton consumption. • O. edulis larvae in C. gigas stomach content was confirmed by DNA analysis. • O. edulis had broader isotopic niche than C. gigas. Abstract: In order to detect the possible regulatory effect of non-native C. gigas on the native O. edulis, under aquaculture conditions, feeding interactions between them were investigated in a highly productive environment of Lim Bay (Adriatic Sea). The present study uses a multi-methodological approach, including stomach content, DNA barcoding and stable isotope analysis to elucidate the feeding ecology of two oyster species. The research confirmed a high overlap throughout the year in the feeding traits among native and non-native oyster species. Competition for food was not the only relationship that exists between the investigated species as the presence of O. edulis larvae in C. gigas stomach content was confirmed by DNA analysis. Findings are not in favour of introducing C. gigas to commercial aquaculture in any new areas in the Adriatic Sea and support the need to improve the existing O. edulis aquaculture and conserve its wild stocks.

Description: In order to expand the fragmentary knowledge on the interactions between the environment and copepod distribution in the deep offshore Adriatic Sea, microcopepod assemblages were investigated during 31 cruises in the 1200-m deep central part of the South Adriatic Pit (SAP), from May 1998 to December 2009. Samples were collected in 8 depth layers, using a 53-μm mesh Nansen net equipped with a closing system. The taxonomic composition and vertical and temporal distributions of copepod abundances were analyzed, considering naupliar stages for all species combined, total calanoid copepodites, copepodite stages and adults separately for oithonids and oncaeids, and all post-naupliar stages combined of harpacticoids and mormonilloids. Corycaeid copepods are not considered in the present study. Data are presented for 41 non-calanoid copepod species, as well as for 7 undetermined morphospecies. Within the family Oncaeidae, four species new to the Adriatic Sea fauna are registered. Nauplii were generally the numerically dominant group, especially in the upper epipelagic layers, where they outnumbered all total post-naupliar stages by a factor of an average 3.5. Oncaeids were notably abundant, accounting in total post-naupliar copepods for an average proportion of 33% in the upper 50 m and 74% between 300- and 400-m depth. In the epipelagic zone, copepod abundances were enhanced by the cyclonic circulation which enriches the central part of the SAP with new primary production. A strong advection of Levantine Intermediate Water (LIW) influenced the post-naupliar abundances also in mesopelagic and deeper layers, by promoting the sinking of heavy water mass from the connected middle Adriatic sub-basin which enhances the trophic conditions and transports new organisms into the deeper layers of the SAP. Therefore, the variability in copepod abundances was influenced not only by the seasonal temperature fluctuations but also by the productivity conditions in the SAP which are connected to the movements of regional water masses and the resulting effects on the internal Adriatic circulation.

Description: Coastal ecosystems globally are exposed to the most pervasive anthropogenic activities, caused by a suite of human infrastructure and enterprises such as shipping ports, aquaculture facilities, fishing, and tourism. These anthropogenic activities may lead to changes in ecosystem biodiversity, followed by loss of ecosystem functioning and services. Shipping industry and aquaculture have also been recognized as the main vectors for introduction of marine non-indigenous species (NIS) worldwide. In this study, we used DNA metabarcoding-based methods to investigate plankton biodiversity under varying anthropogenic pressures (shipping and bivalve aquaculture) along the eastern Adriatic coast (the northernmost part of the Mediterranean Sea). Our comparative assessment revealed similar community structures among investigated coastal locations (Northern, Central and Southern Adriatic). When the whole plankton communities were considered, they did not differ significantly between port and aquaculture sites. However, the proportion of the unique zOTUs in the port samples was remarkably higher than that in aquaculture sites (40.5% vs 8.2%), indicating that port areas may receive higher abundance and species richness of NIS than aquaculture sites. Further important difference between the two types of anthropogenically impacted habitats was a high abundance of three notorious invaders – M. leidyi, M. gigas, and H. elegans in late summer at the aquaculture site in Northern Adriatic. Therefore, the plankton community of the area is under pressure not only from aquaculture activities, but also establishment of NIS. Port areas are probably under greater introduction pressure from NIS, but aquaculture sites may experience greater community changes due to their establishment

Description: The dataset is composed of 50 years of approximately monthly mesozooplankton sampling at station Stončica. The volume of filtered water was estimated assuming 70% efficiency of the Hensen 330 micrometer mesh size net according to Laevastu (1958). Subsamples amounting to 1/20 of the catch were counted for the most representative groups. The whole catch was examined for rare species.The results in the datatables are recalculated to (#/m**3).

Description: Although anthropogenic activities are widely recognized as a major threat to marine biodiversity, their impacts have not been fully assessed and there is an urge to improve the understanding of the magnitude and mechanisms of those impacts. In this study, we used DNA metabarcoding-based methods to investigate plankton biodiversity patterns under varying anthropogenic pressures (i.e., shipping and bivalve aquaculture) along the eastern Adriatic coast. Our study determined similar community structures among investigated coastal locations in three geographic regions in the Adriatic Sea, as well as between shipping ports and aquaculture sites.