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  • 1
    Publication Date: 2023-06-02
    Keywords: Area; BayofBrest; bivalves; Chlorophyll a; Chlorophyll a, standard deviation; Code; Counting, microscope; DATE/TIME; DEPTH, water; European flat oyster; Experimental treatment; Field experiment; Handheld Multiparameter Instrument; Hatchery; marine; Orientation; Ostrea edulis, larvae; Restoration of the European oyster (Ostrea edulis) in the German North Sea: Development and practical testing of methods and approaches for a sustainable population recovery; RESTORE; Roz Bank, Daoulas Cove, Bay of Brest, France; Salinity; Salinity, standard deviation; Settlement; Side; Substrate type; Temperature, water; Temperature, water, standard deviation; Turbidity, standard deviation; Turbidity (Nephelometric turbidity unit)
    Type: Dataset
    Format: text/tab-separated-values, 1668 data points
    Location Call Number Limitation Availability
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  • 2
    Publication Date: 2023-07-18
    Description: The dataset compiles counts of larvae of the European flat oyster Ostrea edulis, settled on various substrates under three different experimental conditions. The data was collected within the AWI-RESTORE project (Alfred-Wegener-Institute, Germany), examining basic preconditions for successful restoration of the European flat oyster within the German Bight. The data is separated in three experimental setups: the columns for experiment 1 (hatchery/laboratory) include date stamp in ISO format, Latitude, Longitude, abiotic factors (Flow rate, temperature, salinity, pH, dissolved oxygen), substrate types, area and orientation as well as the count of settled larvae for each set-up. Data for experiment 2 (hatchery) include date stamp in ISO format, Latitude, Longitude, abiotic factors (Flow rate, temperature, salinity, pH), reef number, specifics of examined area and orientation as well as the count of settled larvae for each reef. Columns for experiment 3 (field) include date stamp in ISO format, Latitude, Longitude, abiotic factors (depth, temperature, salinity), chlorophyll concentration, substrate types, specifics and orientation as well as the count of settled larvae for each submerged substrate.
    Keywords: bivalves; European flat oyster; Hatchery; marine; Restoration of the European oyster (Ostrea edulis) in the German North Sea: Development and practical testing of methods and approaches for a sustainable population recovery; RESTORE; Settlement
    Type: Dataset
    Format: application/zip, 3 datasets
    Location Call Number Limitation Availability
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  • 3
    Publication Date: 2023-07-18
    Keywords: Area; Argenton en Landunvez, France; Basin; bivalves; Code; Counting, microscope; DATE/TIME; European flat oyster; Experimental treatment; Flow meter; Flow rate; Flow rate, standard deviation; Handheld Multiparameter Instrument; Hatchery; IfremerArgenton; Laboratory experiment; marine; Orientation; Ostrea edulis, larvae; Oxygen, dissolved; Oxygen, dissolved, standard deviation; pH; pH, standard deviation; Restoration of the European oyster (Ostrea edulis) in the German North Sea: Development and practical testing of methods and approaches for a sustainable population recovery; RESTORE; Ruler tape; Salinity; Salinity, standard deviation; Settlement; Side; Substrate type; Temperature, water; Temperature, water, standard deviation
    Type: Dataset
    Format: text/tab-separated-values, 3015 data points
    Location Call Number Limitation Availability
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  • 4
    Publication Date: 2023-11-08
    Keywords: Area; bivalves; Counting, microscope; DATE/TIME; European flat oyster; experiment; Flow meter; Flow rate; Handheld Multiparameter Instrument; Hatchery; Image number/name; Laboratory experiment; marine; NovostreaBretagneSAS; Orientation; Ostrea edulis, larvae; pH; Restoration of the European oyster (Ostrea edulis) in the German North Sea: Development and practical testing of methods and approaches for a sustainable population recovery; RESTORE; Salinity; Sarzeau, France; Settlement; Substrate type; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 840 data points
    Location Call Number Limitation Availability
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  • 5
    Publication Date: 2023-12-04
    Description: The dataset includes oyster size and weight measurements used for calculating weight-to-weight transformation factors for oyster total, shell and soft tissue wet weight to dry weight (n = 30), developing a set of allometric and random forest models to estimate oyster total (n = 1241), shell (n = 240) and soft tissue (n = 120) wet weights. For the random forest models, the additional variables location and type (if oysters were single or clustered) were also considered. The size variables were shell Height (H, umbo hinge to longest edge), Length (L, longest distance across the valve) and Width (Wi, maximum distance between external surfaces of the umbo), these were all measured in mm to the closest 0.01 mm using a digital caliper. Oysters were collected and measured at the Nature conservation area Helgoländer Felssockel, Natura 2000 site Borkum Reef Ground, and offshore wind farm Meerwind Süd I Ost. The allometric models and transformation factors allow for the reuse of data, as well as estimation of further ecological parameters and indices. Furthermore, these models and transformations could greatly enhance the outcome of monitoring efforts by restoration programs.
    Keywords: Borkum_cage; Borkum_cage_12; Borkum_cage_7; Borkum Reef Ground; CA; Cage; Campaign; Date/Time of event; Elevation of event; Event label; Helgoland; Helgoland_cage_13; Helgoland_cage_14; Helgoland_cage_15; Helgoland_cage_17; Helgoland_cage_19; Helgoland_cage_21; Helgoland_calcein_exp; Identification; Individual code; Latitude of event; Location of event; Longitude of event; Measured; Monitoring; North Sea; Ostrea edulis; Ostrea edulis, dry mass; Ostrea edulis, height; Ostrea edulis, shell, dry mass; Ostrea edulis, shell, wet mass; Ostrea edulis, soft tissue, dry mass; Ostrea edulis, soft tissue, wet mass; Ostrea edulis, valve, length; Ostrea edulis, valve, width; Ostrea edulis, wet mass; Oyster reef; random forest; restoration; Sample comment; Sample method; Weighted; weight-weight transformation
    Type: Dataset
    Format: text/tab-separated-values, 29171 data points
    Location Call Number Limitation Availability
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  • 6
    Publication Date: 2024-01-26
    Description: Chemical dyes, such as Calcein, can be used to create incremental markings for measuring bivalve growth in shell cross-sections. For the European Oyster Ostrea edulis, potential negative effects and limits for this staining have not been assessed yet. In this study, Ostrea edulis individuals were stained with three different Calcein concentrations (100 mg l−1, 150 mg l−1, 200 mg l−1) at three different immersion times (6 h, 12 h, 24 h) to test the potential negative effects, the best incremental marking result and their potential to be used in growth measurements. The dataset includes the growth measurements of the individuals at the time of staining in Mai 2021 and the growth measurements after a growth period of 5 months (N=10 per treatment). In November 2021, the success of the staining was evaluated using a fluorescence microscope by measuring the increment from the staining line to the edge of the shell. For some individuals, a clean measurement was not possible. Either because the oysters were broken due to handling or because the line was not clearly visible. However, at least 7 or more oysters were measured per treatment. The survival rate for all concentrations and the control was 100%.
    Keywords: Caliper; European oyster; Fluorochrome dye; Helgoland; In-situ fluorescent marking; Laboratory experiment; Mesocosm studies; Ostrea_edulis_growth_phase; Ostrea edulis, growth; Ostrea edulis, height; Ostrea edulis, shell, dry mass; Ostrea edulis, shell, wet mass; Ostrea edulis, soft tissue, dry mass; Ostrea edulis, soft tissue, wet mass; Ostrea edulis, valve, length; Ostrea edulis, valve, width; Ostrea edulis, water content; Ostrea edulis, wet mass; Recapture; Research Stereomicroscope System, Olympus, SZX12 with an external fluorescence light source, Olympus, Model U-ULS100HG; restoration; Restoration of the European oyster (Ostrea edulis) in the German North Sea: Development and practical testing of methods and approaches for a sustainable population recovery; RESTORE; Sample code/label; Sampling date/time, experiment; Scale, Sartorius, TE412 [accuracy 0.01g]; Tagging; Treatment: calcein concentration; Treatment: time after
    Type: Dataset
    Format: text/tab-separated-values, 2212 data points
    Location Call Number Limitation Availability
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  • 7
    Publication Date: 2024-03-01
    Keywords: AWI_BPP; Bentho-Pelagic Processes @ AWI; Brandal; Comment; Kongsfjorden, Spitsbergen, Arctic; Mass spectrometer, Finnigan, MAT 253; MULT; Multiple investigations; ORDINAL NUMBER; Serripes groenlandicus, δ13C; Serripes groenlandicus, δ18O; δ13C, standard deviation; δ18O, standard deviation
    Type: Dataset
    Format: text/tab-separated-values, 890 data points
    Location Call Number Limitation Availability
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  • 8
    Publication Date: 2024-03-01
    Keywords: AWI_BPP; Bentho-Pelagic Processes @ AWI; Brandal; Comment; Kongsfjorden, Spitsbergen, Arctic; Mass spectrometer, Finnigan, MAT 253; MULT; Multiple investigations; ORDINAL NUMBER; Serripes groenlandicus, δ13C; Serripes groenlandicus, δ18O; δ13C, standard deviation; δ18O, standard deviation
    Type: Dataset
    Format: text/tab-separated-values, 540 data points
    Location Call Number Limitation Availability
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  • 9
    Publication Date: 2024-03-01
    Keywords: AWI_BPP; Bentho-Pelagic Processes @ AWI; Brandal; Comment; DATE/TIME; DEPTH, sediment/rock; File name; File size; Identification; Increment number; Kongsfjorden, Spitsbergen, Arctic; MULT; Multiple investigations; Serripes groenlandicus, increment, length; Shell preparation for growth increment analyses; Uniform resource locator/link to image
    Type: Dataset
    Format: text/tab-separated-values, 2511 data points
    Location Call Number Limitation Availability
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  • 10
    Publication Date: 2024-03-01
    Keywords: AWI_BPP; Bentho-Pelagic Processes @ AWI; Brandal; File name; File size; Identification; Kongsfjorden, Spitsbergen, Arctic; MULT; Multiple investigations; Shell preparation for growth increment analyses; Uniform resource locator/link to image
    Type: Dataset
    Format: text/tab-separated-values, 968 data points
    Location Call Number Limitation Availability
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